BAC Information

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BAC

Clone NameB6Ng01-137B17
Chromosome16 (Build37)
Map Location 36,334,068 - 36,537,467
singlet/doubletdoublet
Overlap geneLOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr
Upstream geneSec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324
Downstream geneEG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137B17.bB6Ng01-137B17.g
ACCDH936707DH936708
length1,0731,008
definitionDH936707|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B17, 5' end.DH936708|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,334,068 - 36,335,155)(36,536,458 - 36,537,467)
sequence
gaattcaccttcagctaatggagaaactgaggcttcagtaaagagtgtga
cttggccaattttactcttggagtcttaaaatttctctgaaatgcattat
gttctacttttatctatataaatgtctgaacaaaatcatgtattttggtt
cctgtcattccccaagctcttaacacagggccaaagtataaatcaaattt
tggaagtttggtttgggatcacattttttcctgaagtacatccactcacc
ttgtcagcaatcttctggatttctggtgtggcaggtttggcctctgaaac
acctccgtacatagtcttgatgacttgtttctttgctggcttggacactg
agaagaaatgatcctacaagcactgagactcagggttttaaaggtatctg
taagttcctcctctagtgtcttatctccacattatctgagggaatgggga
aatgaatgtggccttaggcaagtcttactgcatcccttacaggaaatgct
gagtggagttggaggtaaatgtggtaggggacgtgagcaagcatgtgtgc
ccagactcaggtgtggtgagcatggctcctccctacactctttgtaccaa
taatgccatcatattgtgtcatatgagcaagggcacgaataacctgtgtt
tctaaatatggtaacacttaatgagttctttaaagagaatacctaataat
attaaggctggttgcacaggatccacccaacttcatagagataataaaat
tgtctatggtgggtttttacttgcagtttctaatatgtttctccccaaac
atgaagaataagatggcaaacactctcatttattctgctgcttttcattg
tcttgtttttgtttttgttttgtgtgttttgtttgtttttgagacatggt
tactcccaatataccccatcttgacttgaatcataatcctcttgcatctg
ctctcaaattctgggatttttagcatgtgctctgtgcctagtgcttacat
ctgcaattttaatggttattcttgtaaattcttttgctgatgtccagaca
tataaaatggcagtggagtttgg
gaattctccagaaagggagcgctagctccaagccttcctctgtttgtgga
atagcttttccaaaacaatagccttatctcaaatgagatactgcaaaagg
agattactggtcctggaaagaggcttttttccatctgattcttggctttc
ccttccgctaaacagcggtacccaccaatatctcagtacacagtgtacag
agaggacctggctttttatcagattgcaaggtttaggaagggggaagacg
gtccacgacacttcttaaagcagaagccatgcacacaatggcagctgaga
gagtgggcagggaccactggaggctgcaccttcccccaacactaggcagc
agctaacaaacacgttagctaagtgacctccaggtccttttcagatttaa
aattctctcatctggacacatcctaatatccccaggagtgggtgtgttcc
actgtggcttgtttccttctgtgtaaagtttgcaccgtggtaattcctaa
taagatggcttctgttaccagccattctactcagaacactgcccaccacc
cccacccttctccctatcatcaccacaagtctcttccctcttggaacctc
agtccacccacttgttaaatgggacaccgacacagaactattctgagaca
gcttccgggcagtaacttggaacctacgccttcattcggtgcagaagtgt
ctccctgttcttgaggtgtccaggaaacaaacattgaagctcagcctctg
tgggctaaagaagactcatgtgaggagaggtcccctagccagagggccac
tgctacagaaagatgccttacaaaccaaatggacctcttctgctgaagcc
aaagagggggtggggggtagggactgcaaactgcactgagtctttctgct
ctggcaaggcaggtgcaagcggatggcggctgctgacttgaggaaagagc
tacggggagagtgaagaaaggagctacagggaaaggaaatggcaggtcta
gggcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36334068_36335155
seq2: B6Ng01-137B17.b_49_1121

seq1  GAATTCACCTTCAGCTAATGGAGAAACTGAGGCTTCAGTAAAGAGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTCAGCTAATGGAGAAACTGAGGCTTCAGTAAAGAGTGTGA  50

seq1  CTTGGCCAATTTTACTCTTGGAGTCTTAAAATTTCTCTGAAATGCATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCAATTTTACTCTTGGAGTCTTAAAATTTCTCTGAAATGCATTAT  100

seq1  GTTCTACTTTTATCTATATAAATGTCTGAACAAAATCATGTATTTTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACTTTTATCTATATAAATGTCTGAACAAAATCATGTATTTTGGTT  150

seq1  CCTGTCATTCCCCAAGCTCTTAACACAGGGCCAAAGTATAAATCAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATTCCCCAAGCTCTTAACACAGGGCCAAAGTATAAATCAAATTT  200

seq1  TGGAAGTTTGGTTTGGGATCACATTTTTTCCTGAAGTACATCCACTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTTGGTTTGGGATCACATTTTTTCCTGAAGTACATCCACTCACC  250

seq1  TTGTCAGCAATCTTCTGGATTTCTGGTGTGGCAGGTTTGGCCTCTGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGCAATCTTCTGGATTTCTGGTGTGGCAGGTTTGGCCTCTGAAAC  300

seq1  ACCTCCGTACATAGTCTTGATGACTTGTTTCTTTGCTGGCTTGGACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCGTACATAGTCTTGATGACTTGTTTCTTTGCTGGCTTGGACACTG  350

seq1  AGAAGAAATGATCCTACAAGCACTGAGACTCAGGGTTTTAAAGGTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATGATCCTACAAGCACTGAGACTCAGGGTTTTAAAGGTATCTG  400

seq1  TAAGTTCCTCCTCTAGTGTCTTATCTCCACATTATCTGAGGGAATGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTCCTCTAGTGTCTTATCTCCACATTATCTGAGGGAATGGGGA  450

seq1  AATGAATGTGGCCTTAGGCAAGTCTTACTGCATCCCTTACAGGAAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGTGGCCTTAGGCAAGTCTTACTGCATCCCTTACAGGAAATGCT  500

seq1  GAGTGGAGTTGGAGGTAAATGTGGTAGGGGACGTGAGCAAGCATGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGTTGGAGGTAAATGTGGTAGGGGACGTGAGCAAGCATGTGTGC  550

seq1  CCAGACTCAGGTGTGGTGAGCATGGCTCCTCCCTACACTCTTTGTACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTCAGGTGTGGTGAGCATGGCTCCTCCCTACACTCTTTGTACCAA  600

seq1  TAATGCCATCATATTGTGTCATATGAGCAAGGGCACGAATAACCTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCATCATATTGTGTCATATGAGCAAGGGCACGAATAACCTGTGTT  650

seq1  TCTAAATATGGTAACACTTAATGAGTTCTTTAAAGAGAATACCTAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATGGTAACACTTAATGAGTTCTTTAAAGAGAATACCTAATAAT  700

seq1  ATTAAGGCTGGTTGCACAGGATCCACCCAACTTCATAGAGATAATAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGCTGGTTGCACAGGATCCACCCAACTTCATAGAGATAATAAAAT  750

seq1  TGTCTATGGTGGGTTTTTACTTGCAGTTTCTAATATGTTTCTCCCCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGGTGGGTTTTTACTTGCAGTTTCTAATATGTTTCTCCCCAAAC  800

seq1  ATGAAGAATAAGATGGCAAACACTCTCATTTATTCTGCTGCTTTTCATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAATAAGATGGCAAACACTCTCATTTATTCTGCTGCTTTTCATTG  850

seq1  TCTTGTTTTTTGTTTTTGTTTTGTTGTTGTTTTGTTTTGTTTTTTGAGAC  900
      ||||| ||||||||||||||||||   ||||||||||   ||||||||||
seq2  TCTTG-TTTTTGTTTTTGTTTTGT--GTGTTTTGTTT--GTTTTTGAGAC  895

seq1  ATGGTTACTCCCAATATACCCCATCTTGACCTTGAATTCATAATCCTCTT  950
      ||||||||||||||||||||||||||||| |||||| |||||||||||||
seq2  ATGGTTACTCCCAATATACCCCATCTTGA-CTTGAA-TCATAATCCTCTT  943

seq1  GCATCTGCCTCTCAAATTCTGGGATTTTTTTAGCATGTGCCTCTGTGCCT  1000
      ||||||| ||||||||||||||||  ||||||||||||| ||||||||||
seq2  GCATCTG-CTCTCAAATTCTGGGA--TTTTTAGCATGTG-CTCTGTGCCT  989

seq1  AGTGCTTACATCTGCCAATTTTAAATGGTTTATTCTTGTAAATTTCTTTG  1050
      |||||||||||||| ||||||| ||||| |||||||||||||||  ||||
seq2  AGTGCTTACATCTG-CAATTTT-AATGG-TTATTCTTGTAAATTCTTTTG  1036

seq1  CTGATGTTCAGACATAGTAAATGGCAGTTGAAGTTTGG  1088
      ||||||| ||||||||  ||||||||| || |||||||
seq2  CTGATGTCCAGACATATAAAATGGCAG-TGGAGTTTGG  1073

seq1: chr16_36536458_36537467
seq2: B6Ng01-137B17.g_67_1074 (reverse)

seq1  ACTTGCCCTGGGCCTGGCAGTTCCTCTCCCTGTAGCTCCTTTCCTCACTC  50
      ||||||||| | |||| || ||||| ||||||||||||||||| ||||||
seq2  ACTTGCCCTAGACCTGCCATTTCCTTTCCCTGTAGCTCCTTTCTTCACTC  50

seq1  TCCCCGTAGCTCCTTTCCTCACGTCAGCAGCCCGCATCCGCCTGCACCTG  100
      ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||
seq2  TCCCCGTAGCT-CTTTCCTCAAGTCAGCAGCCGCCATCCGCTTGCACCTG  99

seq1  CCTTGCCAGAGCAGAAAGATCTCAGTGCAGTTTGCAGTCCCTACCCCCAC  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||  
seq2  CCTTGCCAGAGCAGAAAGA-CTCAGTGCAGTTTGCAGTCCCTACCCCCCA  148

seq1  CCCCCTCTTTGGCTTCAGCAGAAGAGGTCCATTTGGTTTGTAAGGCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTTTGGCTTCAGCAGAAGAGGTCCATTTGGTTTGTAAGGCATCT  198

seq1  TTCTGTAGCAGTGGCCCTCTGGCTAGGGGACCTCTCCTCACCTGAGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTGTAGCAGTGGCCCTCTGGCTAGGGGACCTCTCCTCACATGAGTCTT  248

seq1  CTTTAGCCCACAGAGGCTGAGCTTCAATGTTTGTTTCCTGGACACCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCCCACAGAGGCTGAGCTTCAATGTTTGTTTCCTGGACACCTCAA  298

seq1  GAACAGGGAGACACTTCTGCACCGAATGAAGGCGTAGGTTCCAAGTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGAGACACTTCTGCACCGAATGAAGGCGTAGGTTCCAAGTTACT  348

seq1  GCCCGGAAGCTGTCTCAGAATAGTTCTGTGTCGGTGTCCCATTTAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGAAGCTGTCTCAGAATAGTTCTGTGTCGGTGTCCCATTTAACAAG  398

seq1  TGGGTGGACTGAGGTTCCAAGAGGGAAGAGACTTGTGGTGATGATAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGACTGAGGTTCCAAGAGGGAAGAGACTTGTGGTGATGATAGGGA  448

seq1  GAAGGGTGGGGGTGGTGGGCAGTGTTCTGAGTAGAATGGCTGGTAACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGGGGGTGGTGGGCAGTGTTCTGAGTAGAATGGCTGGTAACAGA  498

seq1  AGCCATCTTATTAGGAATTACCACGGTGCAAACTTTACACAGAAGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTTATTAGGAATTACCACGGTGCAAACTTTACACAGAAGGAAAC  548

seq1  AAGCCACAGTGGAACACACCCACTCCTGGGGATATTAGGATGTGTCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGTGGAACACACCCACTCCTGGGGATATTAGGATGTGTCCAGA  598

seq1  TGAGAGAATTTTAAATCTGAAAAGGACCTGGAGGTCACTTAGCTAACGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAATTTTAAATCTGAAAAGGACCTGGAGGTCACTTAGCTAACGTG  648

seq1  TTTGTTAGCTGCTGCCTAGTGTTGGGGGAAGGTGCAGCCTCCAGTGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGCTGCTGCCTAGTGTTGGGGGAAGGTGCAGCCTCCAGTGGTCC  698

seq1  CTGCCCACTCTCTCAGCTGCCATTGTGTGCATGGCTTCTGCTTTAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACTCTCTCAGCTGCCATTGTGTGCATGGCTTCTGCTTTAAGAAG  748

seq1  TGTCGTGGACCGTCTTCCCCCTTCCTAAACCTTGCAATCTGATAAAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTGGACCGTCTTCCCCCTTCCTAAACCTTGCAATCTGATAAAAAGC  798

seq1  CAGGTCCTCTCTGTACACTGTGTACTGAGATATTGGTGGGTACCGCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTCTCTGTACACTGTGTACTGAGATATTGGTGGGTACCGCTGTT  848

seq1  TAGCGGAAGGGAAAGCCAAGAATCAGATGGAAAAAAGCCTCTTTCCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGAAGGGAAAGCCAAGAATCAGATGGAAAAAAGCCTCTTTCCAGGA  898

seq1  CCAGTAATCTCCTTTTGCAGTATCTCATTTGAGATAAGGCTATTGTTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAATCTCCTTTTGCAGTATCTCATTTGAGATAAGGCTATTGTTTTG  948

seq1  GAAAAGCTATTCCACAAACAGAGGAAGGCTTGGAGCTAGCGCTCCCTTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTATTCCACAAACAGAGGAAGGCTTGGAGCTAGCGCTCCCTTTC  998

seq1  TGGAGAATTC  1010
      ||||||||||
seq2  TGGAGAATTC  1008