BAC Information

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BAC

Clone NameB6Ng01-137H14
Chromosome16 (Build37)
Map Location 57,422,094 - 57,514,990
singlet/doubletdoublet
Overlap gene2610528E23Rik, 4631422O05Rik
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137H14.bB6Ng01-137H14.g
ACCDH936983DH936984
length1,1881,147
definitionDH936983|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H14, 5' end.DH936984|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,513,824 - 57,514,990)(57,422,094 - 57,423,249)
sequence
gaattcttcctcttgagctcatttgttacctgtagaaatgccatctgtag
cagactgcttccaaggtgtacacgtccctctgtctttccctctagcccgt
gtgctatttccaccgatctttaattcacatttctgtgtttcgcctctttg
ctctctggaataaaacagccatgtgcacctacctcccagtgttagtgtta
ttctggatggctgccctagccttgctccagaagatgagaacagccgtgaa
catgagaaccctaccccaccagcccttcacattcccagcctgaatctctg
tcatcttgcatctcatgtggtcagcccctggatagggtcagcctgcacct
ctttgttctctgcccggcaacactctggccatgctcagtgaatgttcaca
atatggggagatgaaagaaagtgtctgttagcaagtcaatgccaagacag
tatgggggccaaattaggccactagtgccaaaccacagggcttcaagatc
atatttaatataacattgtctcattgaataataaatcgtatatttgtaat
gtctgagttgaatcttcccttggtgccagatttcttgagcttataaaatg
tgttcttgcagatacctcaagagttcataaggttcagattctctacgata
tttctcacttttcctcccgtgtttcaaataaacaacctaggaaaaataga
gtgcttataggatacagggatgctaaagtgagtgtttaccaggaaattct
ctgaaaagacatgagacctcaccattagctgctggaactttggtttccta
actaaaatactagttggaaatttctttgctcagttttgtcgtgtaagcct
tttaattccagcactctggaaggtgagacatggaaggttgttcgcaagct
cgatgctagtgtgtgtgaaaacagtaaggacttgtgtctcaaaaccaaca
caaaacaaaacagaaattttgcgcaaagcagtttaagaatggctagggtt
tgatcctttttttctgtggtcatctggtggtgtggttgcaaacagttgta
ctggggcgagagctaatggcttgggtgttcgtcttggcgtttccttctgg
agcttaacaccttctttctacagcatgtaaggtggctccactctcttagg
actccaggcaatttcttggcaggatctacacagctcac
gaattcaccttgaaaaaaaggaaaggataagagcaggcacagagaagtcc
caaggagccactacttaagttactaaggctgcgagcaaaccatgcagatg
tttctcagtgctaccaaaactatgccggagtaagctacggtcacatctgt
gcactccaccacattaaaaagaaatgctgtgtacggaaatgatacaaatg
gttctcaggagagagagctttcatttattgcgtacaggctgagtgcttag
ctgactaattaatgattcttttgaaagaggaagttaaacaggagaaccat
gaaataggctgcataggctgcagagatttgccttgacttagttttactgc
aggtgattactcacaccagagaccggcttgggtttgcacttttcatcaac
tttggtgaggggcaggaagaaaaggaacagtcatgcagtccggagaggtt
ctagttgtcctacataaaaaggatgtggacagataaagttgctgactaca
aagaaagctattgggaagaaatttaccatgtcttgtttaatattctactc
aagaataaactgagatcttggctcaagagtgacttgaagaatatcaacct
tagggaagctactcttctagattctgccagatacctaaggctttcctgag
atacttctgccactccaaattacagcaagattgaatctcatgttatttaa
tttgaaatatgtttaatttttctatttcccatgaattgttaatctaaatt
gctgtttcagtaggagcctccaaaatcaacttttagctctttaacattct
ggtagcagggaagtcttgtgtcgttaacagccccctctcccatactatca
aaagcccttggagaaagaagctggtcaagttttttgaggccaagttaata
agtaaagagtatttaacctagttagataggagtgtgtaatgtttttcagc
actacaggtgaaagcaaagagagatttgtgtttgatgaaccatattttag
gacagtcatttccatagaatttaacaccaatgaaaccctggcttgcatag
aacttgtattccagcttctagaaagcagaagccaagcctgcgatgccagc
cagcctgtgttggctttagtgagttccaaccaaactgacagtggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57513824_57514990
seq2: B6Ng01-137H14.b_49_1236 (reverse)

seq1  GTGAGCTG----------GGCAAGAAATGGCGT-GAGTCCTAAGGGAAGT  39
      ||||||||          | |||||||| || | |||||||||| | |||
seq2  GTGAGCTGTGTAGATCCTGCCAAGAAATTGCCTGGAGTCCTAAGAG-AGT  49

seq1  GGAG-CACACTACATGGCTGTAG-AAGAGGGTG-TAAGCT-CAGGAGGAG  85
      |||| |||  ||||| ||||||| |||| |||| |||||| ||| |||| 
seq2  GGAGCCACCTTACAT-GCTGTAGAAAGAAGGTGTTAAGCTCCAGAAGGAA  98

seq1  ACGCAAAGACGGACACCC-AGCCATAAGCTCTCG-CACAGTAC-ACTGTT  132
      |||| |||||| |||||| |||||| |||||||| | |||||| ||||||
seq2  ACGCCAAGACGAACACCCAAGCCATTAGCTCTCGCCCCAGTACAACTGTT  148

seq1  TGCAACACAACCACAGAATGA-CACAGAAAAAAAGGGATCAAAACCCTAG  181
      ||||||   |||||   |||| |||||||||||| ||||| |||||||||
seq2  TGCAACCACACCACCAGATGACCACAGAAAAAAA-GGATC-AAACCCTAG  196

seq1  CCAT--CTCAACTGCTTTGCGCAAAAATTTCTGTTTTGTTTTGTGTTGGT  229
      ||||   | ||||||||||||| |||||||||||||||||||||||||||
seq2  CCATTCTTAAACTGCTTTGCGC-AAAATTTCTGTTTTGTTTTGTGTTGGT  245

seq1  TTTGAGACAC-AGT-CTTACTG-TGTCACACACACTAGCATCGAGCTTGC  276
      |||||||||| ||| ||||||| | |||||||||||||||||||||||||
seq2  TTTGAGACACAAGTCCTTACTGTTTTCACACACACTAGCATCGAGCTTGC  295

seq1  G-ACAACCTTCCATGTCTCACCTTCCAGAGTGCTGGAATT-AAAGGCTTA  324
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAACAACCTTCCATGTCTCACCTTCCAGAGTGCTGGAATTAAAAGGCTTA  345

seq1  CACGACAAAACTGAGCAAAGAAATTTCCAACTAGTATTTTAGTTAGGAAA  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGACAAAACTGAGCAAAGAAATTTCCAACTAGTATTTTAGTTAGGAAA  395

seq1  CCAAAGTTCCAGCAGCTAATGGTGAGGTCTCATGTCTTTTCAGAGAATTT  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTCCAGCAGCTAATGGTGAGGTCTCATGTCTTTTCAGAGAATTT  445

seq1  CCTGGTAAACACTCACTTTAGCATCCCTGTATCCTATAAGCACTCTATTT  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAAACACTCACTTTAGCATCCCTGTATCCTATAAGCACTCTATTT  495

seq1  TTCCTAGGTTGTTTATTTGAAACACGGGAGGAAAAGTGAGAAATATCGTA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGGTTGTTTATTTGAAACACGGGAGGAAAAGTGAGAAATATCGTA  545

seq1  GAGAATCTGAACCTTATGAACTCTTGAGGTATCTGCAAGAACACATTTTA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTGAACCTTATGAACTCTTGAGGTATCTGCAAGAACACATTTTA  595

seq1  TAAGCTCAAGAAATCTGGCACCAAGGGAAGATTCAACTCAGACATTACAA  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCAAGAAATCTGGCACCAAGGGAAGATTCAACTCAGACATTACAA  645

seq1  ATATACGATTTATTATTCAATGAGACAATGTTATATTAAATATGATCTTG  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACGATTTATTATTCAATGAGACAATGTTATATTAAATATGATCTTG  695

seq1  AAGCCCTGTGGTTTGGCACTAGTGGCCTAATTTGGCCCCCATACTGTCTT  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGTGGTTTGGCACTAGTGGCCTAATTTGGCCCCCATACTGTCTT  745

seq1  GGCATTGACTTGCTAACAGACACTTTCTTTCATCTCCCCATATTGTGAAC  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGACTTGCTAACAGACACTTTCTTTCATCTCCCCATATTGTGAAC  795

seq1  ATTCACTGAGCATGGCCAGAGTGTTGCCGGGCAGAGAACAAAGAGGTGCA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGAGCATGGCCAGAGTGTTGCCGGGCAGAGAACAAAGAGGTGCA  845

seq1  GGCTGACCCTATCCAGGGGCTGACCACATGAGATGCAAGATGACAGAGAT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACCCTATCCAGGGGCTGACCACATGAGATGCAAGATGACAGAGAT  895

seq1  TCAGGCTGGGAATGTGAAGGGCTGGTGGGGTAGGGTTCTCATGTTCACGG  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGGGAATGTGAAGGGCTGGTGGGGTAGGGTTCTCATGTTCACGG  945

seq1  CTGTTCTCATCTTCTGGAGCAAGGCTAGGGCAGCCATCCAGAATAACACT  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTCATCTTCTGGAGCAAGGCTAGGGCAGCCATCCAGAATAACACT  995

seq1  AACACTGGGAGGTAGGTGCACATGGCTGTTTTATTCCAGAGAGCAAAGAG  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGGAGGTAGGTGCACATGGCTGTTTTATTCCAGAGAGCAAAGAG  1045

seq1  GCGAAACACAGAAATGTGAATTAAAGATCGGTGGAAATAGCACACGGGCT  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAACACAGAAATGTGAATTAAAGATCGGTGGAAATAGCACACGGGCT  1095

seq1  AGAGGGAAAGACAGAGGGACGTGTACACCTTGGAAGCAGTCTGCTACAGA  1124
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAAGACAGAGGGACGTGTACACCTTGGAAGCAGTCTGCTACAGA  1145

seq1  TGGCATTTCTACAGGTAACAAATGAGCTCAAGAGGAAGAATTC  1167
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTCTACAGGTAACAAATGAGCTCAAGAGGAAGAATTC  1188

seq1: chr16_57422094_57423249
seq2: B6Ng01-137H14.g_68_1214

seq1  GAATTCACCTTGAAAAAAAGGAAAGGATAAGAGCAGGCACAGAGAAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGAAAAAAAGGAAAGGATAAGAGCAGGCACAGAGAAGTCC  50

seq1  CAAGGAGCCACTACTTAAGTTACTAAGGCTGCGAGCAAACCATGCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGCCACTACTTAAGTTACTAAGGCTGCGAGCAAACCATGCAGATG  100

seq1  TTTCTCAGTGCTACCAAAACTATGCCGGAGTAAGCTACGGTCACATCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTGCTACCAAAACTATGCCGGAGTAAGCTACGGTCACATCTGT  150

seq1  GCACTCCACCACATTAAAAAGAAATGCTGTGTACGGAAATGATACAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCACCACATTAAAAAGAAATGCTGTGTACGGAAATGATACAAATG  200

seq1  GTTCTCAGGAGAGAGAGCTTTCATTTATTGCGTACAGGCTGAGTGCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGGAGAGAGAGCTTTCATTTATTGCGTACAGGCTGAGTGCTTAG  250

seq1  CTGACTAATTAATGATTCTTTTGAAAGAGGAAGTTAAACAGGAGAACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAATTAATGATTCTTTTGAAAGAGGAAGTTAAACAGGAGAACCAT  300

seq1  GAAATAGGCTGCATAGGCTGCAGAGATTTGCCTTGACTTAGTTTTACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGGCTGCATAGGCTGCAGAGATTTGCCTTGACTTAGTTTTACTGC  350

seq1  AGGTGATTACTCACACCAGAGACCGGCTTGGGTTTGCACTTTTCATCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTACTCACACCAGAGACCGGCTTGGGTTTGCACTTTTCATCAAC  400

seq1  TTTGGTGAGGGGCAGGAAGAAAAGGAACAGTCATGCAGTCCGGAGAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAGGGGCAGGAAGAAAAGGAACAGTCATGCAGTCCGGAGAGGTT  450

seq1  CTAGTTGTCCTACATAAAAAGGATGTGGACAGATAAAGTTGCTGACTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGTCCTACATAAAAAGGATGTGGACAGATAAAGTTGCTGACTACA  500

seq1  AAGAAAGCTATTGGGAAGAAATTTACCATGTCTTGTTTAATATTCTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCTATTGGGAAGAAATTTACCATGTCTTGTTTAATATTCTACTC  550

seq1  AAGAATAAACTGAGATCTTGGCTCAAGAGTGACTTGAAGAATATCAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAACTGAGATCTTGGCTCAAGAGTGACTTGAAGAATATCAACCT  600

seq1  TAGGGAAGCTACTCTTCTAGATTCTGCCAGATACCTAAGGCTTTCCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAGCTACTCTTCTAGATTCTGCCAGATACCTAAGGCTTTCCTGAG  650

seq1  ATACTTCTGCCACTCCAAATTACAGCAAGATTGAATCTCATGTTATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTGCCACTCCAAATTACAGCAAGATTGAATCTCATGTTATTTAA  700

seq1  TTTGAAATATGTTTAATTTTTCTATTTCCCATGAATTGTTAATCTAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATATGTTTAATTTTTCTATTTCCCATGAATTGTTAATCTAAATT  750

seq1  GCTGTTTCAGTAGGAGCCTCCAAAATCAACTTTTAGCTCTTTAACATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCAGTAGGAGCCTCCAAAATCAACTTTTAGCTCTTTAACATTCT  800

seq1  GGTAGCAGGGAAGTCTTGTGTTCGTTAACAGCCCCCTCTCCCATACTATC  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGTAGCAGGGAAGTCTTGTG-TCGTTAACAGCCCCCTCTCCCATACTATC  849

seq1  AAAAGCCCTTGGAGAAAGAAGCTGGTCAAGTTTTTTGAGGCCAAGTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCTTGGAGAAAGAAGCTGGTCAAGTTTTTTGAGGCCAAGTTAAT  899

seq1  AAGTAAAGAGTA-TTAACCTAGTTAGATA-GAGTGTGTAATGTTTTTCAG  948
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  AAGTAAAGAGTATTTAACCTAGTTAGATAGGAGTGTGTAATGTTTTTCAG  949

seq1  CACTACA-GTGAAAGCAAAGAGAAGATCTGTGTTTGATGAACCATAATTT  997
      ||||||| |||||||||||||| |||| ||||||||||||||||| ||||
seq2  CACTACAGGTGAAAGCAAAGAG-AGATTTGTGTTTGATGAACCAT-ATTT  997

seq1  TAGGACAGTCATTTCCATAGAATTAAACACCAATGAAACCCTGGGCTTGC  1047
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  TAGGACAGTCATTTCCATAGAATTTAACACCAATGAAACCCT-GGCTTGC  1046

seq1  ATAGAAC-TGTATTCCCAGCTCCTTAGAAAGCAGAAGCAAAGGCCTGCGA  1096
      ||||||| |||||| |||||| | |||||||||||||| || ||||||||
seq2  ATAGAACTTGTATT-CCAGCTTC-TAGAAAGCAGAAGCCAA-GCCTGCGA  1093

seq1  TGCCAAGGTCAGCCTGTG-TGGC-TTAGTGAGTTTCCACAACACAAACTG  1144
      |||||  | ||||||||| |||| |||||||||| | ||    |||||||
seq2  TGCCA--GCCAGCCTGTGTTGGCTTTAGTGAGTTCCAAC----CAAACTG  1137

seq1  AACAGTGAGAAG  1156
       |||||| ||||
seq2  -ACAGTG-GAAG  1147