BAC Information

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BAC

Clone NameB6Ng01-141I10
Chromosome16 (Build37)
Map Location 31,500,321 - 31,651,323
singlet/doubletdoublet
Overlap geneGm536
Upstream geneTmem44, Lsg1, BC022623, LOC100043122, AI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1
Downstream geneDlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141I10.bB6Ng01-141I10.g
ACCDH939964DH939965
length569947
definitionDH939964|Mus musculus domesticus DNA, BAC clone: B6Ng01-141I10, 5' end.DH939965|Mus musculus domesticus DNA, BAC clone: B6Ng01-141I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,650,749 - 31,651,323)(31,500,321 - 31,501,274)
sequence
ctaggacagatccttgtcaagcctctttctctcccttttcactgccaccc
tctccgtgtcttcagaatggccctcatttcacgagttgtattcaggtctg
tgagaccgccctcttcccgagaaaccttgaagttcacagcatactttgtt
ctcagagtacttaaaaccttgacaacaggctatttgcagagctaaccacc
aaacaagtgttagatgccagaaagacggcctaattgagtgggagactgga
agggatgatggcccagggctgaacgaaggaagagcaggaaggaggggcca
aaggacttcctatgccagctgctgcccctgacagtccagctttctcccca
catctcagtagactaacatgagaaatactgcctggactaataaagaaaag
atcaacatggttaccaaagcattcctttaaaaaaaaaaaaaaaaaaagaa
tccatctgatagagggagcccagcatcactttgtatataataacattggg
ggagggggtctagtttatatgctcagtgaagacacattgaaaaacagaaa
tacactggggggggggggg
gaattccagcctggggttggcaaggagaaaggtctttctcccctccactt
tctccttacaacggaatcaatgaaatggtcctgtttctgggctgggcctt
gaattccttgaaatcccttgggaacccttagggtaatgctgttcacccca
taggctagctgctcatcctcggggacagatggtttcaactgagacctgtg
gttccaattctcactgcactggggaggacctgagacctgttctatcagag
ctctatcctcctttttaaaaagagcaaacttagaatgtctgtcctctttc
accccagtggtcctaacagtttacatctttcagagaacccctgtcctctg
aaagatcctctgtggacgtcctgtgagcatcacagaattccaggaggcag
gcactcctgcctgatgttgcaaagttatgacgcagaccagctagtgagga
aacttgtttaaggtcagggggctggtctgagagagggggagggagagccc
agctggcttcactcccattgcaaggctctcagaagccagcaaactgaatc
agaggccaggcttccaataccacatctcactacaggatgccatcttggag
agcaacaggcctaggctgtcgggcatctccaaagtgagaaggctgctgga
gaactttttactctgtgatgtgtgatctcatgaggaacattctagaagaa
gctgagatacaatagaaaaggcaccaaaacttaagtcagatttacttaag
tcatcgcacggactttgaataagtcacatggcttttgttctctcagcatt
gctagcaaacgaacaaataatccgctgcctaagtaactttggccctgcgg
caataagttcaatgtcgagccacaaaacaccatatcgtgtatagatgcta
gctgaggaattctgatttaagacattaaatgtctgacaggcaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31650749_31651323
seq2: B6Ng01-141I10.b_48_622 (reverse)

seq1  CCCCCCCCCCCCCAGTGTATTTCTGTTTTTCAATGTGTCTTCACTGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCAGTGTATTTCTGTTTTTCAATGTGTCTTCACTGAGCA  50

seq1  TATAAACTAGACCCCCTCCCCCAATGTTATTATATACAAAGTGATGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTAGACCCCCTCCCCCAATGTTATTATATACAAAGTGATGCTGG  100

seq1  GCTCCCTCTATCAGATGGATTCTTTTTTTTTTTTTTTTTTTAAAGGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCTATCAGATGGATTCTTTTTTTTTTTTTTTTTTTAAAGGAATG  150

seq1  CTTTGGTAACCATGTTGATCTTTTCTTTATTAGTCCAGGCAGTATTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTAACCATGTTGATCTTTTCTTTATTAGTCCAGGCAGTATTTCTC  200

seq1  ATGTTAGTCTACTGAGATGTGGGGAGAAAGCTGGACTGTCAGGGGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGTCTACTGAGATGTGGGGAGAAAGCTGGACTGTCAGGGGCAGCA  250

seq1  GCTGGCATAGGAAGTCCTTTGGCCCCTCCTTCCTGCTCTTCCTTCGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATAGGAAGTCCTTTGGCCCCTCCTTCCTGCTCTTCCTTCGTTCA  300

seq1  GCCCTGGGCCATCATCCCTTCCAGTCTCCCACTCAATTAGGCCGTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGCCATCATCCCTTCCAGTCTCCCACTCAATTAGGCCGTCTTTC  350

seq1  TGGCATCTAACACTTGTTTGGTGGTTAGCTCTGCAAATAGCCTGTTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTAACACTTGTTTGGTGGTTAGCTCTGCAAATAGCCTGTTGTCA  400

seq1  AGGTTTTAAGTACTCTGAGAACAAAGTATGCTGTGAACTTCAAGGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAAGTACTCTGAGAACAAAGTATGCTGTGAACTTCAAGGTTTCT  450

seq1  CGGGAAGAGGGCGGTCTCACAGACCTGAATACAACTCGTGAAATGAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGAGGGCGGTCTCACAGACCTGAATACAACTCGTGAAATGAGGGC  500

seq1  CATTCTGAAGACACGGAGAGGGTGGCAGTGAAAAGGGAGAGAAAGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAAGACACGGAGAGGGTGGCAGTGAAAAGGGAGAGAAAGAGGCT  550

seq1  TGACAAGGATCTGTCCTAGGAATTC  575
      |||||||||||||||||||||||||
seq2  TGACAAGGATCTGTCCTAGGAATTC  575

seq1: chr16_31500321_31501274
seq2: B6Ng01-141I10.g_70_1016

seq1  GAATTCCAGCCTGGGGTTGGCAAGGAGAAAGGTCTTTCTCCCCTCCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTGGGGTTGGCAAGGAGAAAGGTCTTTCTCCCCTCCACTT  50

seq1  TCTCCTTACAACGGAATCAATGAAATGGTCCTGTTTCTGGGCTGGGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACAACGGAATCAATGAAATGGTCCTGTTTCTGGGCTGGGCCTT  100

seq1  GAATTCCTTGAAATCCCTTGGGAACCCTTAGGGTAATGCTGTTCACCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAAATCCCTTGGGAACCCTTAGGGTAATGCTGTTCACCCCA  150

seq1  TAGGCTAGCTGCTCATCCTCGGGGACAGATGGTTTCAACTGAGACCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGCTGCTCATCCTCGGGGACAGATGGTTTCAACTGAGACCTGTG  200

seq1  GTTCCAATTCTCACTGCACTGGGGAGGACCTGAGACCTGTTCTATCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAATTCTCACTGCACTGGGGAGGACCTGAGACCTGTTCTATCAGAG  250

seq1  CTCTATCCTCCTTTTTAAAAAGAGCAAACTTAGAATGTCTGTCCTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCCTCCTTTTTAAAAAGAGCAAACTTAGAATGTCTGTCCTCTTTC  300

seq1  ACCCCAGTGGTCCTAACAGTTTACATCTTTCAGAGAACCCCTGTCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTGGTCCTAACAGTTTACATCTTTCAGAGAACCCCTGTCCTCTG  350

seq1  AAAGATCCTCTGTGGACGTCCTGTGAGCATCACAGAATTCCAGGAGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCCTCTGTGGACGTCCTGTGAGCATCACAGAATTCCAGGAGGCAG  400

seq1  GCACTCCTGCCTGATGTTGCAAAGTTATGACGCAGACCAGCTAGTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCTGCCTGATGTTGCAAAGTTATGACGCAGACCAGCTAGTGAGGA  450

seq1  AACTTGTTTAAGGTCAGGGGGCTGGTCTGAGAGAGGGGGAGGGAGAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTTAAGGTCAGGGGGCTGGTCTGAGAGAGGGGGAGGGAGAGCCC  500

seq1  AGCTGGCTTCACTCCCATTGCAAGGCTCTCAGAAGCCAGCAAACTGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTTCACTCCCATTGCAAGGCTCTCAGAAGCCAGCAAACTGAATC  550

seq1  AGAGGCCAGGCTTCCAATACCACATCTCACCACAGGATGCCATCTTGGAG  600
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAGGCCAGGCTTCCAATACCACATCTCACTACAGGATGCCATCTTGGAG  600

seq1  AGCAACAGGCCTAGGCTGTCGGGCATCTCCAAAGTGAGAAGGCTGCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGGCCTAGGCTGTCGGGCATCTCCAAAGTGAGAAGGCTGCTGGA  650

seq1  GAAC-TTTTACTCTGTGATGTGTGATCTCATGAGGAACATTCTAGAAGAA  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTACTCTGTGATGTGTGATCTCATGAGGAACATTCTAGAAGAA  700

seq1  GCTGAGATACAATAGAAAAGGCACCAAAACTTAAGTCAGCATTTACTTAA  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGAGATACAATAGAAAAGGCACCAAAACTTAAGTCAG-ATTTACTTAA  749

seq1  GTCATCGCAC-GACTTTGAATAAGTCACATGGC-TTTGTTCTCTCAGCAT  797
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  GTCATCGCACGGACTTTGAATAAGTCACATGGCTTTTGTTCTCTCAGCAT  799

seq1  TGCTAGCTAAACGAGCAAATAGATCCGCTGCCCTAAGTAACATTGGCCCT  847
      ||||||| |||||| |||||| |||||||| |||||||||| ||||||||
seq2  TGCTAGC-AAACGAACAAATA-ATCCGCTG-CCTAAGTAACTTTGGCCCT  846

seq1  GCGGCAATAGGTTCAATGCCAGAGCCACAAAACACCATAGCGTGTATAAG  897
      ||||||||| |||||||| | |||||||||||||||||| ||||||| ||
seq2  GCGGCAATAAGTTCAATGTC-GAGCCACAAAACACCATATCGTGTAT-AG  894

seq1  ATGCTAGCTGAGGGAACTCCTGAGTCTAAGACATTCAAATG-CTGACAAG  946
      |||||||||||||  | | |||| | ||||||||| ||||| ||||| ||
seq2  ATGCTAGCTGAGG--AATTCTGA-TTTAAGACATT-AAATGTCTGAC-AG  939

seq1  GCAAAATG  954
      ||||||||
seq2  GCAAAATG  947