BAC Information

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BAC

Clone NameB6Ng01-141P10
Chromosome16 (Build37)
Map Location 85,401,360 - 85,402,402
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App
Downstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141P10.bB6Ng01-141P10.g
ACCDH940284DH940285
length7261,034
definitionDH940284|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P10, 5' end.DH940285|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgacattcttaggcaaatggatggatctggaggatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatggtatacactcactga
taagtggatgttagcccagaagcttggaaaacccaaggtacaattcacgg
accacatgaaactcaagaagaagaccaaagtgtggatacttcggtccttc
ttagaaaggggaacaaaatacccatggaaggagatacagagaaaaagtgt
ggagcagagaatgaaggaaagacagactgccccatctggaaatccatccc
atatacagtcatcaaacccagacactattatggatgtcaacaagtgcttg
ctgacaggaacctgatatagctgtctcctgaaagactctgtcagtacctg
acaaatacacaagttgatgctcacagtcatcctttggactgagcacgagg
tccccaatggaggagctagagaaaggacccaaggacctgaaggagcttac
agccccataggaggaacaacaatatgaaccaaccagtaacccccagaact
cccagagactaaatcaccaaccaaagagaacacatggagggagggaccca
tggcaccacctacatgtggagcagaggatggccttgttggacatcaatgg
gaggagaggcccttggtcctgagaaggctcaatgccccagtgtaggggag
gacagggaagtgggagttagtgggtt
gaattcttaggactctgatgcctcatcatcgtggtctggcctctcttgta
tgagaatcatgaagatttgaggagagaagaaatagtgtgctttactttga
atatgaaaggctctccacgggcttgagcgttgaacacttcgacctcagtt
cggtggcactgtttagttagttatgcagacattagcaggtacagcatagc
ttgatgaaataggtccctgggatagctcattgggagtaactagtttttgc
ctcttccctgtctaaaatgaagagaagaactccatcacttgctacagcta
ccacggtgttctgtctaagtagttggggtcaattatgaattgacacctct
gaaaccatgagacataatgatgatgatgatgacttcttcattattattat
tattattattattattattattattatttcttctccctttagatagttct
taggcattttggtcacagcatgcaaagatcatacaatatcatttaatgat
gagtataaaagtaggtgaaatgattgcaacataatttttgcaatcactaa
ggaccagttagaagttggaagccatagatttgcaaagagaacaagcagca
tgcttgcgcatctgcttctaggaatacttagttcgatacatggaagttta
gacagatgagataaatctgatgagagtctgagccttgctaatggcgtgca
gctaagcagaaatgaactagggatgcatcagggttgcttaccaggaaggg
tttataatgatggaaataacatttatgtcacaaaaaggagagaaagcaag
atagtagacgtgtgagagactgtaaagagtgcatggttaagggtaagatg
ttatttagttagcaggaacagagactgaaggttagaaatggaaattggga
ctttgtatttatttgatactacaggttatggttaccaccacgggagagtg
tggtttgagaacattgatcggattataaatgagagagtagaaagaatagc
tcagcaatggaaagttttaaggcttggttggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_85401360_85402402
seq2: B6Ng01-141P10.g_72_1105

seq1  GAATTCTTAGGACTCTGATGCCTCATCATCGTGGTCTGGCCTCTCTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGACTCTGATGCCTCATCATCGTGGTCTGGCCTCTCTTGTA  50

seq1  TGAGAATCATGAAGATTTGAGGAGAGAAGAAATAGTGTGCTTTACTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCATGAAGATTTGAGGAGAGAAGAAATAGTGTGCTTTACTTTGA  100

seq1  ATATGAAAGGCTCTCCACGGGCTTGAGCGTTGAACACTTCGACCTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAGGCTCTCCACGGGCTTGAGCGTTGAACACTTCGACCTCAGTT  150

seq1  CGGTGGCACTGTTTAGTTAGTTATGCAGACATTAGCAGGTACAGCATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGCACTGTTTAGTTAGTTATGCAGACATTAGCAGGTACAGCATAGC  200

seq1  TTGATGAAATAGGTCCCTGGGATAGCTCATTGGGAGTAACTAGTTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAAATAGGTCCCTGGGATAGCTCATTGGGAGTAACTAGTTTTTGC  250

seq1  CTCTTCCCTGTCTAAAATGAAGAGAAGAACTCCATCACTTGCTACAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTGTCTAAAATGAAGAGAAGAACTCCATCACTTGCTACAGCTA  300

seq1  CCACGGTGTTCTGTCTAAGTAGTTGGGGTCAATTATGAATTGACACCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGTGTTCTGTCTAAGTAGTTGGGGTCAATTATGAATTGACACCTCT  350

seq1  GAAACCATGAGACATAATGATGATGATGATGACTTCTTCATTATTATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATGAGACATAATGATGATGATGATGACTTCTTCATTATTATTAT  400

seq1  TATTATTATTATTATTATTATTATTATTTCTTCTCCCTTTAGATAGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTTCTTCTCCCTTTAGATAGTTCT  450

seq1  TAGGCATTTTGGTCACAGCATGCAAAGATCATACAATATCATTTAATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTTTGGTCACAGCATGCAAAGATCATACAATATCATTTAATGAT  500

seq1  GAGTATAAAAGTAGGTGAAATGATTGCAACATAATTTTTGCAATCACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAAAAGTAGGTGAAATGATTGCAACATAATTTTTGCAATCACTAA  550

seq1  GGACCAGTTAGAAGTTGGAAGCCATAGATTTGCAAAGAGAACAAGCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGTTAGAAGTTGGAAGCCATAGATTTGCAAAGAGAACAAGCAGCA  600

seq1  TGCTTGCGCATCTGCTTCTAGGAATACTTAGTTCGATACATGGAAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCGCATCTGCTTCTAGGAATACTTAGTTCGATACATGGAAGTTTA  650

seq1  GACAGATGAGATAAATCTGATGAGAGTCTGAGCCTTGCTAATGGCGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGAGATAAATCTGATGAGAGTCTGAGCCTTGCTAATGGCGTGCA  700

seq1  GCTAAGCAGAAATGAACTAGGGATGCATCAGGGTTGCTTACCAGGAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCAGAAATGAACTAGGGATGCATCAGGGTTGCTTACCAGGAAGGG  750

seq1  TTTATAATGATGGAAATAACATTTATGTCACAAAAAGGAGAGAAAGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGATGGAAATAACATTTATGTCACAAAAAGGAGAGAAAGCAAG  800

seq1  ATAGTAGACGTGTGAGAGACTGTAAAGAGTGCATGGTTAAGGGTAAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGACGTGTGAGAGACTGTAAAGAGTGCATGGTTAAGGGTAAGATG  850

seq1  TTA-TTAGTTAGCAGGAACAGAGACTAGAAGGTTAGAAATGGAAATTGGG  899
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTATTTAGTTAGCAGGAACAGAGACT-GAAGGTTAGAAATGGAAATTGGG  899

seq1  ACTTTGTATTTATTTGATACTACAGGGTATGGTTTACCACCACGGGAGAG  949
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  ACTTTGTATTTATTTGATACTACAGGTTATGG-TTACCACCACGGGAGAG  948

seq1  TGTGGTTGAAGAAACATTGATCGGGATTATAAATGAAGAAGAGTCAGAGA  999
      |||||||  || |||||||||| |||||||||||||   ||||| ||| |
seq2  TGTGGTTTGAG-AACATTGATC-GGATTATAAATGA--GAGAGT-AGAAA  993

seq1  G-ATAGCTCAGCAATGAATAGTTTTTAAGGACTTGGGTTTGGTTC  1043
      | |||||||||||||| | || |||||||| |||||  |||||||
seq2  GAATAGCTCAGCAATGGAAAG-TTTTAAGG-CTTGG--TTGGTTC  1034