BAC Information

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BAC

Clone NameB6Ng01-143I13
Chromosome16 (Build37)
Map Location 22,039,323 - 22,168,156
singlet/doubletdoublet
Overlap geneSenp2, EG239760, Igf2bp2
Upstream geneLOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143I13.bB6Ng01-143I13.g
ACCDH941445DH941446
length1,1081,092
definitionDH941445|Mus musculus domesticus DNA, BAC clone: B6Ng01-143I13, 5' end.DH941446|Mus musculus domesticus DNA, BAC clone: B6Ng01-143I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,167,034 - 22,168,156)(22,039,323 - 22,040,426)
sequence
gaattctgcatcttgatcaataggcaaccaggagaaacaggcagtttcag
gcagctaggaggaagctctcttctgcaatgggtggatcctgagcatggga
agagacctccaaagcccatccccacaatgatacacttcctccaactaggc
cacatttcctaacagtaccatttcctattgttgcggtaaatctccaaccc
caatgagcccatgcaaggaaaacacaactcagttatatatttataaactg
taggcttgtattgggcagatatgtctctacccactttcttccccagctat
aaaatccccgctacgtgcagtttttccaggccatgtgcctctgctccatc
ttccttccaacttttctccctctgtcctcctccactcgttatctccttct
cccctcctcttcctatcttgcccagaaaacccacctcctcatttttgccc
actgataggctatttctaatctttcttagccaatcagataattaagggaa
attcctctatcccctacgggccaagaatattcaaaccaccatacataggt
tttagaaagaaatgtaaatacttgaagactgtccccaaacttctgatcct
aaactctcatcttgctttactaggtttacaagatcactcgggaactctga
caaccatttcagctctctagggagggctaatgtagggaagattgagagaa
acagccaggagtgcgttttgttaggtaggagcgaggacctctatagattt
ctggctttcccttggaggttgctcctgccatctccaaagggttccctggc
ccccttcctatcacattgcctctaggaactgtggctactgcatgttgatc
ttgatatcaacacaatgggatttggagtcatcagggaaacaatacctgac
atgactctgaaggactgggtttaagtgggaagagcatcctaacgtgtgtg
gcagcatccctcatgggctgggctgcttagctgcagaaagagacagcgag
ttgagcatcagctttattcttctgcttctgactgtagacccaatgcagca
gcttctcaacccagctccatgcttcctacgaggtggggtgtattttcaaa
catgagaa
gaattcaggccagccagggctacgtagtgagacacacacaccacacacac
acaccgacccccaaaatgcattacctgcagttgtgatgactacagagccc
gatatcagtgcctgtagcttccctgtctcctgttggtacagtggtgctga
gaagtggtgctgagccttcacatgggaaggaaaggggaccgtgtaactct
gtccttctgcttctcttagtgctagcctcgtccgtgggggttaaggtgct
catgagagtcattgcctactgctgtcatgctgagtagtagatcctttaga
aggatcttagagcaaggacaaaagatgccgctgcagtaagagtgcttgct
cttcacaggatccttgcttgcttcccagcttgggacttcatctccagagg
atctaatgcctccactcaaacctgtactcatgtgcatatacccaatagat
acatgtaattaaaaagaaatcttagagttcttgattgatgtgtgtgttta
aggcatagcaagtgataactataaacagtcgctccatttgttatctgaat
catacatattctgcaaaagctggcttagttactactactttttcatttgg
ctcttcaaccaactgttctgtccttgaattttctcccatttgctccatct
ccctatgtcacaagcctaattacatggaaatactatcatttgtaaatata
aatatgcttattataaagcttttgaaaaacactttatatttgaaaatttt
tgaagaaattattgctcaaaagttccataagtatttttgacatttctcct
cctgggaagtatgtccaaatgaggtgtattttgggatgtagtcctatagt
taagaattcattttttatgcataacacttgcatatgccctttcattatta
catagaaatgctatttatgtgcctcaaacttcagtcacatgactgctggg
ttttttttaaggaggtgattgagtccaggcctcacatgtactaaaaagca
gctgctgaggctcaaggccatgggcttcaatcttcttgcctttgcctttt
gatcagagcatgtgtctacttctgcgtggcactgctcttgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22167034_22168156
seq2: B6Ng01-143I13.b_50_1157 (reverse)

seq1  TTCTCATGTTTTGAGAATACCACCCACCCTCGTAGGGAAGGCATGGAGCT  50
      |||||||| ||||| |||| |||||  |||||||||  | ||||||||||
seq2  TTCTCATG-TTTGAAAATA-CACCCCACCTCGTAGG--AAGCATGGAGCT  46

seq1  GGGGTGTGAAGAAGCTGCCTGCATTGGGTCTACAGTCAGGAAGCAGAAGA  100
      ||| ||   |||||||| |||||||||||||||||||| |||||||||||
seq2  GGGTTG---AGAAGCTG-CTGCATTGGGTCTACAGTCA-GAAGCAGAAGA  91

seq1  ATAAAGGCTGATGCTCAACTCGCTGTCTCTTTCTGCAGCTTAGCAGCCCA  150
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  ATAAA-GCTGATGCTCAACTCGCTGTCTCTTTCTGCAGCTAAGCAGCCCA  140

seq1  GCCCATGAGGGATGCTGCCACACACGTTTAGGATGGCTCTTCCCACCTAA  200
      |||||||||||||||||||||||||| ||||||| ||||||||||| |||
seq2  GCCCATGAGGGATGCTGCCACACACG-TTAGGAT-GCTCTTCCCACTTAA  188

seq1  ACCCAGTCCCTCAGAGTCATGGTCAGGTATTTGTTTCCCTGATGACTCCA  250
      ||||||||| |||||||||| |||||||| ||||||||||||||||||||
seq2  ACCCAGTCCTTCAGAGTCAT-GTCAGGTA-TTGTTTCCCTGATGACTCCA  236

seq1  AATCCCATTGTGTTGATATCAAGATCAACATGCAGTAGCCACAGTTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATTGTGTTGATATCAAGATCAACATGCAGTAGCCACAGTTCCTA  286

seq1  GAGGCAATTGTGATAGGAAGGGGGCCAGGGAACCCTTTGGAGATGGCAGG  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAA-TGTGATAGGAAGGGGGCCAGGGAACCCTTTGGAGATGGCAGG  335

seq1  AGCAACCTCCAAGGGAAAGCCAGAAATCTATAGAGGTCCTCGCTCCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCTCCAAGGGAAAGCCAGAAATCTATAGAGGTCCTCGCTCCTACC  385

seq1  TAACAAAACGCACTCCTGGCTGTTTCTCTCAATCTTCCCTACATTAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAACGCACTCCTGGCTGTTTCTCTCAATCTTCCCTACATTAGCCC  435

seq1  TCCCTAGAGAGCTGAAATGGTTGTCAGAGTTCCCGAGTGATCTTGTAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGAGAGCTGAAATGGTTGTCAGAGTTCCCGAGTGATCTTGTAAAC  485

seq1  CTAGTAAAGCAAGATGAGAGTTTAGGATCAGAAGTTTGGGGACAGTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAAGCAAGATGAGAGTTTAGGATCAGAAGTTTGGGGACAGTCTTC  535

seq1  AAGTATTTACATTTCTTTCTAAAACCTATGTATGGTGGTTTGAATATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTACATTTCTTTCTAAAACCTATGTATGGTGGTTTGAATATTCT  585

seq1  TGGCCCGTAGGGGATAGAGGAATTTCCCTTAATTATCTGATTGGCTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCGTAGGGGATAGAGGAATTTCCCTTAATTATCTGATTGGCTAAGA  635

seq1  AAGATTAGAAATAGCCTATCAGTGGGCAAAAATGAGGAGGTGGGTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAGAAATAGCCTATCAGTGGGCAAAAATGAGGAGGTGGGTTTTCT  685

seq1  GGGCAAGATAGGAAGAGGAGGGGAGAAGGAGATAACGAGTGGAGGAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGATAGGAAGAGGAGGGGAGAAGGAGATAACGAGTGGAGGAGGAC  735

seq1  AGAGGGAGAAAAGTTGGAAGGAAGATGGAGCAGAGGCACATGGCCTGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAAAAGTTGGAAGGAAGATGGAGCAGAGGCACATGGCCTGGAA  785

seq1  AAACTGCACGTAGCGGGGATTTTATAGCTGGGGAAGAAAGTGGGTAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCACGTAGCGGGGATTTTATAGCTGGGGAAGAAAGTGGGTAGAGA  835

seq1  CATATCTGCCCAATACAAGCCTACAGTTTATAAATATATAACTGAGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGCCCAATACAAGCCTACAGTTTATAAATATATAACTGAGTTGT  885

seq1  GTTTTCCTTGCATGGGCTCATTGGGGTTGGAGATTTACCGCAACAATAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTGCATGGGCTCATTGGGGTTGGAGATTTACCGCAACAATAGG  935

seq1  AAATGGTACTGTTAGGAAATGTGGCCTAGTTGGAGGAAGTGTATCATTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTACTGTTAGGAAATGTGGCCTAGTTGGAGGAAGTGTATCATTGT  985

seq1  GGGGATGGGCTTTGGAGGTCTCTTCCCATGCTCAGGATCCACCCATTGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGGCTTTGGAGGTCTCTTCCCATGCTCAGGATCCACCCATTGCA  1035

seq1  GAAGAGAGCTTCCTCCTAGCTGCCTGAAACTGCCTGTTTCTCCTGGTTGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGCTTCCTCCTAGCTGCCTGAAACTGCCTGTTTCTCCTGGTTGC  1085

seq1  CTATTGATCAAGATGCAGAATTC  1123
      |||||||||||||||||||||||
seq2  CTATTGATCAAGATGCAGAATTC  1108

seq1: chr16_22039323_22040426
seq2: B6Ng01-143I13.g_66_1157

seq1  GAATTCAGGCCAGCCAGGGCTACGTAGTGAGACACACACACCACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCAGCCAGGGCTACGTAGTGAGACACACACACCACACACAC  50

seq1  ACACCGACCCCCAAAATGCATTACCTGCAGTTGTGATGACTACAGAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGACCCCCAAAATGCATTACCTGCAGTTGTGATGACTACAGAGCCC  100

seq1  GATATCAGTGCCTGTAGCTTCCCTGTCTCCTGTTGGTACAGTGGTGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGTGCCTGTAGCTTCCCTGTCTCCTGTTGGTACAGTGGTGCTGA  150

seq1  GAAGTGGTGCTGAGCCTTCACATGGGAAGGAAAGGGGACCGTGTAACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTGCTGAGCCTTCACATGGGAAGGAAAGGGGACCGTGTAACTCT  200

seq1  GTCCTTCTGCTTCTCTTAGTGCTAGCCTCGTCCGTGGGGGTTAAGGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTGCTTCTCTTAGTGCTAGCCTCGTCCGTGGGGGTTAAGGTGCT  250

seq1  CATGAGAGTCATTGCCTACTGCTGTCATGCTGAGTAGTAGATCCTTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGTCATTGCCTACTGCTGTCATGCTGAGTAGTAGATCCTTTAGA  300

seq1  AGGATCTTAGAGCAAGGACAAAAGATGCCGCTGCAGTAAGAGTGCTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTAGAGCAAGGACAAAAGATGCCGCTGCAGTAAGAGTGCTTGCT  350

seq1  CTTCACAGGATCCTTGCTTGCTTCCCAGCTTGGGACTTCATCTCCAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGGATCCTTGCTTGCTTCCCAGCTTGGGACTTCATCTCCAGAGG  400

seq1  ATCTAATGCCTCCACTCAAACCTGTACTCATGTGCATATACCCAATAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGCCTCCACTCAAACCTGTACTCATGTGCATATACCCAATAGAT  450

seq1  ACATGTAATTAAAAAGAAATCTTAGAGTTCTTGATTGATGTGTGTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATTAAAAAGAAATCTTAGAGTTCTTGATTGATGTGTGTGTTTA  500

seq1  AGGCATAGCAAGTGATAACTATAAACAGTCGCTCCATTTGTTATCTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGCAAGTGATAACTATAAACAGTCGCTCCATTTGTTATCTGAAT  550

seq1  CATACATATTCTGCAAAAGCTGGCTTAGTTACTACTACTTTTTCATTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATTCTGCAAAAGCTGGCTTAGTTACTACTACTTTTTCATTTGG  600

seq1  CTCTTCAACCAACTGTTCTGTCCTTGAATTTTCTCCCATTTGCTCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAACCAACTGTTCTGTCCTTGAATTTTCTCCCATTTGCTCCATCT  650

seq1  CCCTATGTCACAAGCCTAATTACATGGAAATACTATCATTTGTAAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGTCACAAGCCTAATTACATGGAAATACTATCATTTGTAAATATA  700

seq1  AATATGCTTATTATAAAGCTTTTGAAAAACACTTTATATTTGAAAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTTATTATAAAGCTTTTGAAAAACACTTTATATTTGAAAATTTT  750

seq1  TGAAGAAATTATTGCTCAAAAGTTCCATAAGTA-TTTTGACATTTCTCCT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAAGAAATTATTGCTCAAAAGTTCCATAAGTATTTTTGACATTTCTCCT  800

seq1  CCTGGGAAGTATGTCCAAATTGAGGTGTATTTT-GGATGTAGTCCTATAG  848
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  CCTGGGAAGTATGTCCAAA-TGAGGTGTATTTTGGGATGTAGTCCTATAG  849

seq1  TTAAGAATTCA-TTTTTATGCATAACACTTGCATATGCCCTTTCATTATT  897
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATTCATTTTTTATGCATAACACTTGCATATGCCCTTTCATTATT  899

seq1  ACATAGAAATGCTATTTATGTGCCTCAAACTTTCAGTCACATGACTTGCT  947
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  ACATAGAAATGCTATTTATGTGCCTCAAAC-TTCAGTCACATGAC-TGCT  947

seq1  GGGTTTTTTTTTTAGGGAGGTGATTGAGTCCAGGGCCTCACATGTACTAG  997
      |||  ||||||||| ||||||||||||||||| |||||||||||||||| 
seq2  GGG--TTTTTTTTAAGGAGGTGATTGAGTCCA-GGCCTCACATGTACTA-  993

seq1  ACAAGCAGGCTGCTGAGGGGCTC-AGGCCATGGCCCTTCATCCTTCTGTG  1046
      | ||||| ||||||||  ||||| |||||||||  |||||  ||||| ||
seq2  AAAAGCA-GCTGCTGA--GGCTCAAGGCCATGG-GCTTCAATCTTCT-TG  1038

seq1  CCTTGCTCTTTTGTACTGAGCAGTTGTTGCTAACTTCTTGCGT-GCACTG  1095
      ||||   ||||||  | |||||  |||  || ||||| ||||| ||||||
seq2  CCTTTGCCTTTTGATCAGAGCA--TGTGTCT-ACTTC-TGCGTGGCACTG  1084

seq1  CTCCTTGCC  1104
      || ||||||
seq2  CT-CTTGCC  1092