BAC Information

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BAC

Clone NameB6Ng01-145H09
Chromosome16 (Build37)
Map Location 28,224,996 - 28,385,702
singlet/doubletdoublet
Overlap geneFgf12
Upstream geneOstn, Uts2d, Ccdc50
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145H09.bB6Ng01-145H09.g
ACCDH942857DH942858
length884896
definitionDH942857|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H09, 5' end.DH942858|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,384,825 - 28,385,702)(28,224,996 - 28,225,839)
sequence
gaattctccaagtggactgggagacacgtcttctgtgtaagacaaattgg
ctgctgaggaagagtgatgacaggcatttgcttccattatcgatagtgaa
gtgcttcatttttcatctgaaaaggtgaaaaaaagactcacattgaattg
acttgttaattatgcagggtttttccaacatctctggagtatcatggaga
acatgatgtggtagtctcatcattacaaaaccaaaggcaggccccttttt
agtgctcaggtgtgtacatatttgctagtttttgtgtcaaagaaagagac
tgccatgttgctcatttttaccaagctggaaatccacattctgtgttgcc
aggaaatggcttagaagagaaatctcagtctctaagccccaaggccacta
atcagttccataagtcaataaattcataggggaaactaaatcagctggtg
tgattatttggccagttgtttataaagcagggcaccagactggatgcatt
gagtcagcacagtctaaagtatgttgactccacagtcttatgtaggatgt
tatttaaactatatgttgtttggacttcctggatttgcattttgtgtaag
gtgaaacccaaagcttatcctatcccaggatatcttaagaaagccaagtt
aaaacatggagtggtgatcatccagccctgctacctcttaaatttccata
tttagagacaagaaaataacaaacttgtaaccatttggcttttctatgtc
tgccagttcttcaattaaaaacattggaggcttattttttatgaattaat
gtctaaggactttaagctaggcttgttccctaactatatcataactcaac
taacctatttagactattctatattctatcacat
gaattcttgccatgaacgtgtgttgtattcaggtttgtattcattcagag
atgatgctcctaaccctcaagagactggaggccccagggagtttagagct
caggtggggtgaggaatgggggcatccacatggagatggtctgtggtgga
caggaggtgtgagatgtggagcagtcagaaagtggatgtgggggcatgga
atgtggagtataaaaataaattaaaaataaaattaaataaaaaagaaagt
gtgctgtaaatttaacccattttactcaagtatcaatagttttaaccatt
ttaaaatatttttaaaatatacctgattttcattattttacgttacgcaa
actttaatttaaacttctcttgaattacttattagccttacattttaaca
acatatacaaaatgctatttgatgggcgagaataactgatcacttttccc
aagattatctctgtaaataagttacatttgtaattagcatgtctgaccaa
taacttgtatatataaatagttcataagttagtaattattatttcagatt
ttttcctatagtgacattttagagaattctggaatttttggtttctttaa
aaaaacacagaaatattataagaacatgctttcactttaatcccagatgt
agggatatggactgcttcagattatccaaagcagctgactatgattggtc
ttgaaatctaaaagaagcatggtttttccactgcagataatttctgtgat
tgtgtgacattttggaactcagggactttttcagagggtacataaatgct
aggaccctagacacagttcgttggtctttggtcacttagggagttgctgc
ggtttgttgtaactatgttcccagacaaagcaaatgaaagaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28384825_28385702
seq2: B6Ng01-145H09.b_44_927 (reverse)

seq1  ATGTGATAG-ATATAGAATAGTCTAAATAGGTTAGTTGAGTTATGATATA  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATAGAATATAGAATAGTCTAAATAGGTTAGTTGAGTTATGATATA  50

seq1  GTTAGGGAACAAGCCTAGCTT-AAGTCC-TAGACATTAATTCATAAAAAA  97
      ||||||||||||||||||||| |||||| ||||||||||||||| |||||
seq2  GTTAGGGAACAAGCCTAGCTTAAAGTCCTTAGACATTAATTCAT-AAAAA  99

seq1  ATAAGCCTCC-ATGTTTTTAATTG-AGAACTGGCAGACATAGAAAAGCCA  145
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  ATAAGCCTCCAATGTTTTTAATTGAAGAACTGGCAGACATAGAAAAGCCA  149

seq1  AATGGTTACAAGTTTGTTATTTTCTTGTCTCTAAATATGGAAATTT-AGA  194
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATGGTTACAAGTTTGTTATTTTCTTGTCTCTAAATATGGAAATTTAAGA  199

seq1  GGTAGCAGGGCTGGATGATCACCACTCCATGTTTTAACTTGGCTTTCTTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAGGGCTGGATGATCACCACTCCATGTTTTAACTTGGCTTTCTTA  249

seq1  AGATATCCTGGGATAGGATAAGCTTTGGGTTTCACCTTACAC-AAATGCA  293
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGATATCCTGGGATAGGATAAGCTTTGGGTTTCACCTTACACAAAATGCA  299

seq1  AATCCAGGAAGTCCAAACAACATATAGTTTAAATAACATCCTACATAAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGGAAGTCCAAACAACATATAGTTTAAATAACATCCTACATAAGA  349

seq1  CTGTGGAGTCAACATACTTTAGACTGTGCTGACTCAATGCATCCAGTCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTCAACATACTTTAGACTGTGCTGACTCAATGCATCCAGTCTG  399

seq1  GTGCCCTGCTTTATAAACAACTGGCCAAATAATCACACCAGCTGATTTAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTGCTTTATAAACAACTGGCCAAATAATCACACCAGCTGATTTAG  449

seq1  TTTCCCCTATGAATTTATTGACTTATGGAACTGATTAGTGGCCTTGGGGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTATGAATTTATTGACTTATGGAACTGATTAGTGGCCTTGGGGC  499

seq1  TTAGAGACTGAGATTTCTCTTCTAAGCCATTTCCTGGCAACACAGAATGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACTGAGATTTCTCTTCTAAGCCATTTCCTGGCAACACAGAATGT  549

seq1  GGATTTCCAGCTTGGTAAAAATGAGCAACATGGCAGTCTCTTTCTTTGAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCCAGCTTGGTAAAAATGAGCAACATGGCAGTCTCTTTCTTTGAC  599

seq1  ACAAAAACTAGCAAATATGTACACACCTGAGCACTAAAAAGGGGCCTGCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACTAGCAAATATGTACACACCTGAGCACTAAAAAGGGGCCTGCC  649

seq1  TTTGGTTTTGTAATGATGAGACTACCACATCATGTTCTCCATGATACTCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTGTAATGATGAGACTACCACATCATGTTCTCCATGATACTCC  699

seq1  AGAGATGTTGGAAAAACCCTGCATAATTAACAAGTCAATTCAATGTGAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTTGGAAAAACCCTGCATAATTAACAAGTCAATTCAATGTGAGT  749

seq1  CTTTTTTTCACCTTTTCAGATGAAAAATGAAGCACTTCACTATCGATAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTCACCTTTTCAGATGAAAAATGAAGCACTTCACTATCGATAAT  799

seq1  GGAAGCAAATGCCTGTCATCACTCTTCCTCAGCAGCCAATTTGTCTTACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAAATGCCTGTCATCACTCTTCCTCAGCAGCCAATTTGTCTTACA  849

seq1  CAGAAGACGTGTCTCCCAGTCCACTTGGAGAATTC  878
      |||||||||||||||||||||||||||||||||||
seq2  CAGAAGACGTGTCTCCCAGTCCACTTGGAGAATTC  884

seq1: chr16_28224996_28225839
seq2: B6Ng01-145H09.g_123_964

seq1  TGCTCCTAACCCTCAAGAGACTGGAGGCCCCAGGGAGTTTAGAGCTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTAACCCTCAAGAGACTGGAGGCCCCAGGGAGTTTAGAGCTCAGG  50

seq1  TGGGGTGAGGAATGGGGGCATCCACATGGAGATGGTCTGTGGTGGACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGAGGAATGGGGGCATCCACATGGAGATGGTCTGTGGTGGACAGG  100

seq1  AGGTGTGAGATGTGGAGCAGTCAGAAAGTGGATGTGGGGGCATGGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAGATGTGGAGCAGTCAGAAAGTGGATGTGGGGGCATGGAATGT  150

seq1  GGAGTATAAAAATAAATTAAAAATAAAATTAAATAAAAAAGAAAGTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATAAAAATAAATTAAAAATAAAATTAAATAAAAAAGAAAGTGTGC  200

seq1  TGTAAATTTAACCCATTTTACTCAAGTATCAATAGTTTTAACCATTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTTAACCCATTTTACTCAAGTATCAATAGTTTTAACCATTTTAA  250

seq1  AATATTTTTAAAATATACCTGATTTTCATTATTTTACGTTACGCAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTAAAATATACCTGATTTTCATTATTTTACGTTACGCAAACTT  300

seq1  TAATTTAAACTTCTCTTGAATTACTTATTAGCCTTACATTTTAACAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAACTTCTCTTGAATTACTTATTAGCCTTACATTTTAACAACAT  350

seq1  ATACAAAATGCTATTTGATGGGCGAGAATAACTGATCACTTTTCCCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATGCTATTTGATGGGCGAGAATAACTGATCACTTTTCCCAAGA  400

seq1  TTATCTCTGTAAATAAGTTACATTTGTAATTAGCATGTCTGACCAATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGTAAATAAGTTACATTTGTAATTAGCATGTCTGACCAATAAC  450

seq1  TTGTATATATAAATAGTTCATAAGTTAGTAATTATTATTTCAGATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATATAAATAGTTCATAAGTTAGTAATTATTATTTCAGATTTTTT  500

seq1  CCTATAGTGACATTTTAGAGAATTCTGGAA-TTTTGGTTTCTTTAAAAAA  549
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTATAGTGACATTTTAGAGAATTCTGGAATTTTTGGTTTCTTTAAAAAA  550

seq1  ACACAGAAATATTATAAGAACATGCTTTCACTTTAATCCCAGATGTAGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAATATTATAAGAACATGCTTTCACTTTAATCCCAGATGTAGGG  600

seq1  ATATGGACTGCTTCAGATTATCCAAAGCAGCTGACTATGATTGGTCTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACTGCTTCAGATTATCCAAAGCAGCTGACTATGATTGGTCTTGA  650

seq1  AATCTAAAAGAAGCATGGTTTTTCCAACTGCAGATAATTTCTGTGATTGT  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCTAAAAGAAGCATGGTTTTTCC-ACTGCAGATAATTTCTGTGATTGT  699

seq1  GTGACA-TTTGGAACTCAGGGAACTTTTCAGAGGGTACATAAATGCTAGG  748
      |||||| |||||||||||||||  ||||||||||||||||||||||||||
seq2  GTGACATTTTGGAACTCAGGGACTTTTTCAGAGGGTACATAAATGCTAGG  749

seq1  ACCCTAGACACAGTTCGTTGGTCTTTGGTCACTTAGGGAGGTTGCTGCGG  798
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCCTAGACACAGTTCGTTGGTCTTTGGTCACTTAGGGA-GTTGCTGCGG  798

seq1  TTTGTTAGTAGCTATGTTCCAAGACAAAGCAAAAGGAAAGAAATTA  844
      |||||| ||| ||||||||| ||||||||| ||| |||||||||||
seq2  TTTGTT-GTAACTATGTTCCCAGACAAAGC-AAATGAAAGAAATTA  842