BAC Information

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BAC

Clone NameB6Ng01-146L13
Chromosome16 (Build37)
Map Location 25,614,471 - 25,766,018
singlet/doubletdoublet
Overlap genenone
Upstream geneLpp, 5430420C16Rik
Downstream geneTrp63, LOC100043571, Leprel1, Cldn1, Cldn16, LOC100043057, Il1rap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L13.bB6Ng01-146L13.g
ACCDH943787DH943788
length1,098986
definitionDH943787|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L13, 5' end.DH943788|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,764,910 - 25,766,018)(25,614,471 - 25,615,458)
sequence
gaattcccaacttattaaaatactatattgatggggaaagtaatttatgt
gcagacttttgaaagtatttagcaattaacctataatggaaacgagaaag
tctgctactaagccttggaaagccccacacacccgtgcagcagttgagtg
gggctaggcatcttagagtctctactttctaatttacacagcagaacact
aattactggcatcctgcacaaactcagtgttttgccatgcctgctgccga
ggcctgctataatttggccccatctacgtaactgccattcatacccaaat
atgtgtatgtcgagctaaagataaggaggtattggaacagaactaaggta
gaagttaacaattcatattcaactataatttttgacagctgtcaattctt
ttcagttcaaaagaggggatatagagaaaggtatatgtctttacttaatt
gaattcattctctctctatctctgttttcatggggttccaatacaccggc
ctccaagtgccttattggtttgttttttaattttttcccctcttctctgg
caaaaccccaccacattctttctgaatctctgctatgtgctcttgagcac
tccaatgacaaaacgtagctcctgattcccaaaaaggcagagaaataaat
aagtcgagtgacgtgtaatgcagaatataacacaagctttccccgtggtt
gcttcagagggatggtatttaattccagggggtggaactagtgacaggga
aaggattccaaggaagagcagggcaaagcgggcagtgagggaaagatagg
aattggactgaggggagaaaagcttggaaatgatattttggaagagaatg
tgttcaacaacaaaaggaaacaacggaacattctggaacattaggaaacc
aagtccatcagtgtgtgaactttcaatactacccaggactagagagttaa
ggcatgtgagttgactttataactttttcagttcttatttagccagagtc
agaataaaaatcccttgagtacaggacacaccacttctgtaggacagtca
cttttgcttgaattatcagagtgtttcttatacagatcttgtttcaaa
gaattcagtgaaagaagagtgaagttccatatctttggttcttagctctt
gcccatatagttctttagctcttgctagtacattttgcccaaggtaactg
tctctttcttaaggcagctgctcttatagtctcagcttttccaggttcat
cccatctctattggcatagtgattgtttatctcccctaatctatattcct
ccatctctttgtctctctgtctctctgtctctctctctctgtctcactgt
ctctctgtctctctgtctctctctctctgtatatatatacatatatatat
atatacatacatatatatatacatatatatatatatagagagagagatgt
gtgtgttattgtgtatttatattctgtctgtatatgtacacaaactatgg
attaaactaacctgaattgcccttgtttcaatgggacatctgtatcctgt
tgtaatattgtttaaatagtggcattggataaaaagcaacaacaaaaact
ggacttgtatcgtgtaaatattcatgcttctgtgtataatatccaacgag
gcagtctccattaaggtttctgtcttgcatacttgaaataaagtggacga
gttgggctcccttctacagccaccatctgaaggacacaatacaaaaggta
ccaagaattgctgtaaatactcaagatttttgccctgatcatttgggaca
attttgcatacctgtgctcatcactgtcattttgtcaacttgggactttg
gcatctgtgcaggtgagaaagcttttgatgtttgaattacttttgtgatt
cctggtgggcggtggttttgatcactgctcatttattttggacaatggca
ttcacattaaatttagaatgctgggttgttggcctatggctgtccaatct
gcatggtttcaaaacgaaaccagctttctgttctttagacacatcctatt
gtctttcatcatcatccactggctgcttggacactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25764910_25766018
seq2: B6Ng01-146L13.b_47_1144 (reverse)

seq1  TTTGAAAC-AGATCCTGTAATAAGGAAAACACTCTGATAATTCCAAGCAA  49
      |||||||| |||| |||| |||||  |||||||||||||||| |||||||
seq2  TTTGAAACAAGAT-CTGT-ATAAG--AAACACTCTGATAATT-CAAGCAA  45

seq1  AAGTGAACCTGTCTTACAGAAGTTGTGTGTTCTTGTACTCAAGGGATTTT  99
      ||||||  ||||| ||||||||| ||||| || ||||||||||||| |||
seq2  AAGTGA--CTGTCCTACAGAAGTGGTGTG-TCCTGTACTCAAGGGA-TTT  91

seq1  TTATTCTGACTCTTGGCTACATAAGAACTGAAAAAGTTATAAAGTTCAAA  149
      |||||||||||| |||||| |||||||||||||||||||||||||   ||
seq2  TTATTCTGACTC-TGGCTAAATAAGAACTGAAAAAGTTATAAAGT--CAA  138

seq1  CTCACATGCCTTTAACTCTCTAGTCCTGGTTAGTATTG-AAGTTCACACA  198
      |||||||||| |||||||||||||||||| |||||||| |||||||||||
seq2  CTCACATGCC-TTAACTCTCTAGTCCTGGGTAGTATTGAAAGTTCACACA  187

seq1  CTGATGGACTTGGTTTCCTAATGTTCCAGAATGTTCCGTTGTTTCCTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGACTTGGTTTCCTAATGTTCCAGAATGTTCCGTTGTTTCCTTTT  237

seq1  GTTGTTGAACACATTCTCTTCCAAAATATCATTTCCAAGCTTTTCTCCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGAACACATTCTCTTCCAAAATATCATTTCCAAGCTTTTCTCCCC  287

seq1  TCAGTCCAATTCCTATCTTTCCCTCACTGCCCGCTTTGCCCTGCTCTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCAATTCCTATCTTTCCCTCACTGCCCGCTTTGCCCTGCTCTTCC  337

seq1  TTGGAATCCTTTCCCTGTCACTAGTTCCACCCCCTGGAATTAAATACCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATCCTTTCCCTGTCACTAGTTCCACCCCCTGGAATTAAATACCAT  387

seq1  CCCTCTGAAGCAACCACGGGGAAAGCTTGTGTTATATTCTGCATTACACG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGAAGCAACCACGGGGAAAGCTTGTGTTATATTCTGCATTACACG  437

seq1  TCACTCGACTTATTTATTTCTCTGCCTTTTTGGGAATCAGGAGCTACGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCGACTTATTTATTTCTCTGCCTTTTTGGGAATCAGGAGCTACGTT  487

seq1  TTGTCATTGGAGTGCTCAAGAGCACATAGCAGAGATTCAGAAAGAATGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGGAGTGCTCAAGAGCACATAGCAGAGATTCAGAAAGAATGTG  537

seq1  GTGGGGTTTTGCCAGAGAAGAGGGGAAAAAATTAAAAAACAAACCAATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTTTTGCCAGAGAAGAGGGGAAAAAATTAAAAAACAAACCAATAA  587

seq1  GGCACTTGGAGGCCGGTGTATTGGAACCCCATGAAAACAGAGATAGAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGGAGGCCGGTGTATTGGAACCCCATGAAAACAGAGATAGAGAG  637

seq1  AGAATGAATTCAATTAAGTAAAGACATATACCTTTCTCTATATCCCCTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATTCAATTAAGTAAAGACATATACCTTTCTCTATATCCCCTCT  687

seq1  TTTGAACTGAAAAGAATTGACAGCTGTCAAAAATTATAGTTGAATATGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTGAAAAGAATTGACAGCTGTCAAAAATTATAGTTGAATATGAA  737

seq1  TTGTTAACTTCTACCTTAGTTCTGTTCCAATACCTCCTTATCTTTAGCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACTTCTACCTTAGTTCTGTTCCAATACCTCCTTATCTTTAGCTC  787

seq1  GACATACACATATTTGGGTATGAATGGCAGTTACGTAGATGGGGCCAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACACATATTTGGGTATGAATGGCAGTTACGTAGATGGGGCCAAAT  837

seq1  TATAGCAGGCCTCGGCAGCAGGCATGGCAAAACACTGAGTTTGTGCAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAGGCCTCGGCAGCAGGCATGGCAAAACACTGAGTTTGTGCAGGA  887

seq1  TGCCAGTAATTAGTGTTCTGCTGTGTAAATTAGAAAGTAGAGACTCTAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTAATTAGTGTTCTGCTGTGTAAATTAGAAAGTAGAGACTCTAAG  937

seq1  ATGCCTAGCCCCACTCAACTGCTGCACGGGTGTGTGGGGCTTTCCAAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAGCCCCACTCAACTGCTGCACGGGTGTGTGGGGCTTTCCAAGGC  987

seq1  TTAGTAGCAGACTTTCTCGTTTCCATTATAGGTTAATTGCTAAATACTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGCAGACTTTCTCGTTTCCATTATAGGTTAATTGCTAAATACTTT  1037

seq1  CAAAAGTCTGCACATAAATTACTTTCCCCATCAATATAGTATTTTAATAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTCTGCACATAAATTACTTTCCCCATCAATATAGTATTTTAATAA  1087

seq1  GTTGGGAATTC  1109
      |||||||||||
seq2  GTTGGGAATTC  1098

seq1: chr16_25614471_25615458
seq2: B6Ng01-146L13.g_69_1054

seq1  GAATTCAGTGAAAGAAGAGTGAAGTTCCATATCTTTGGTTCTTAGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAAGAAGAGTGAAGTTCCATATCTTTGGTTCTTAGCTCTT  50

seq1  GCCCATATAGTTCTTTAGCTCTTGCTAGTACATTTTGCCCAAGGTAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATATAGTTCTTTAGCTCTTGCTAGTACATTTTGCCCAAGGTAACTG  100

seq1  TCTCTTTCTTAAGGCAGCTGCTCTTATAGTCTCAGCTTTTCCAGGTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTAAGGCAGCTGCTCTTATAGTCTCAGCTTTTCCAGGTTCAT  150

seq1  CCCATCTCTATTGGCATAGTGATTGTTTATCTCCCCTAATCTATATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCTATTGGCATAGTGATTGTTTATCTCCCCTAATCTATATTCCT  200

seq1  CCATCTCTTTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCACTGT  250

seq1  CTCTCTGTCTCTCTGTCTCTCTCTCTCTGTATATATATACATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTCTGTCTCTCTCTCTCTGTATATATATACATATATATAT  300

seq1  ATATACATACATATATATATACATATATATATATATAGAGAGAGAGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATACATATATATATACATATATATATATATAGAGAGAGAGATGT  350

seq1  GTGTGTTATTGTGTATTTATATTCTGTCTGTATATGTACACAAACTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTATTGTGTATTTATATTCTGTCTGTATATGTACACAAACTATGG  400

seq1  ATTAAACTAACCTGAATTGCCCTTGTTTCAATGGGACATCTGTATCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTAACCTGAATTGCCCTTGTTTCAATGGGACATCTGTATCCTGT  450

seq1  TGTAATATTGTTTAAATAGTGGCATTGGATAAAAAGCAACAACAAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTGTTTAAATAGTGGCATTGGATAAAAAGCAACAACAAAAACT  500

seq1  GGACTTGTATCGTGTAAATATTCATGCTTCTGTGTATAATATCCAACGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGTATCGTGTAAATATTCATGCTTCTGTGTATAATATCCAACGAG  550

seq1  GCAGTCTCCATTAAGGTTTCTGTCTTGCATACTTGAAATAAAGTGGACGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTCCATTAAGGTTTCTGTCTTGCATACTTGAAATAAAGTGGACGA  600

seq1  GTTGGGCTCCCTTCTACAGCCACCATCTGAAGGACACAATACAAAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCTCCCTTCTACAGCCACCATCTGAAGGACACAATACAAAAGGTA  650

seq1  CCAAGAATTGCTGTAAATACTCAAGA-TTTTGCCCTGATCATTTGGGACA  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCAAGAATTGCTGTAAATACTCAAGATTTTTGCCCTGATCATTTGGGACA  700

seq1  A-TTTGCATACCTGTGCTCATCACTGTCATTTTGTCAAC-TGGGACTTTG  747
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTTGCATACCTGTGCTCATCACTGTCATTTTGTCAACTTGGGACTTTG  750

seq1  GCATCTGTGCAGGTGAGAAAGCTTTTGATGTTTGAATTAC-TTTGTGATT  796
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCATCTGTGCAGGTGAGAAAGCTTTTGATGTTTGAATTACTTTTGTGATT  800

seq1  CCTGGTGGGCGGTGGTTTTGATCACTGCTCATTTA-TTTGGA-AATGGCA  844
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  CCTGGTGGGCGGTGGTTTTGATCACTGCTCATTTATTTTGGACAATGGCA  850

seq1  TTCACATTAAATTTAGAAATGCCTGGTTGTTGGCCTAT-GCTGTCCAAAT  893
      |||||||||||||||| |||||  |||||||||||||| ||||||| |||
seq2  TTCACATTAAATTTAG-AATGCTGGGTTGTTGGCCTATGGCTGTCC-AAT  898

seq1  CTGCATGGTTTCAAAAAGGAAACACAGCTTTCTGTTCTTTTAGACAACAT  943
      |||||||||||| |||| ||||| ||||||||||||| ||||||| ||||
seq2  CTGCATGGTTTC-AAAACGAAAC-CAGCTTTCTGTTC-TTTAGAC-ACAT  944

seq1  -CTATTGTCATTCATCAATCAATCAACTGGCTGTCTTGGAACACTT  988
       |||||||| |||||| ||| ||| |||||||| ||||| ||||||
seq2  CCTATTGTCTTTCATC-ATC-ATCCACTGGCTG-CTTGG-ACACTT  986