BAC Information

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BAC

Clone NameB6Ng01-147B01
Chromosome16 (Build37)
Map Location 49,862,820 - 49,863,705
singlet/doubletsinglet
Overlap geneCd47
Upstream geneRetnlg, 2310047C04Rik, C330027C09Rik, Myh15, 1700026J12Rik, LOC386061, EG216818, LOC628903, Ift57, LOC667796, LOC100043767
Downstream geneEG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147B01.bB6Ng01-147B01.g
ACCDH944046DH944047
length888123
definitionDH944046|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B01, 5' end.DH944047|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcagggtactgggacagaagctgataacttacatgttggcac
caggaggaagagagagcgtcaactgggatggtttaggtttttgaaacctc
agagcccatcctagtgacatacctccaataaggcaaccccttctaatcct
tcccaaacagttctatcaactagggaccaagcgttcaaacacaggagatt
atgaagccattctcattaaaactcatcacaacttaggaacactgatatgt
agtatgaaccaaggactaggtttaaaaagttaggacaaggtggagaaaac
aggtatactagaggtagaagaacaaagttaacaaaaaaaaaaaaaaaaaa
aaaaggaggagcggctccctggctcaagaactgtagagaaatcaagacaa
aatgaagcatgtgaattgggttattcataagaggtagtgatttggataag
agctggagcaatggtgtagtaatagtgagcagagtggagtcctgttgaca
tagtctgggagtgcacagaggtcaagaaatgcacatagaccattaggatg
ctgggtaagagaaatgcacatagaccattgattgtcttaggatgctgggt
aagagacatgagtatgcaggctttttaaagtttggtggatatacagttat
taaaagatgatttaaaacacaccataaatggactaaggggatgtagaggc
tggcaggccatgagtcctctagatgatgcacaagagtcagcaatggaagc
aagctcagcgtaaagaactcatttctggaaagggagagtaaaaacccatg
gatagttgaggctgtgggtaagattgtgtgggaagtgttttaagcctcag
gcttcctgggaaggactcaatgtgagtagggagagagg
aatagattcaacaagctgaagtgcccaagtgaggatgcctcagtcccact
tgggagaaagaagaaaacaatcacatgttgggagagagggagggacctgg
gagggaaagtggatggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_49862820_49863705
seq2: B6Ng01-147B01.b_45_932

seq1  GAATTCAGGCAGGGTACTGGGACAGAAGCTGATAACTTACATGTTGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGGGTACTGGGACAGAAGCTGATAACTTACATGTTGGCAC  50

seq1  CAGGAGGAAGAGAGAGCGTCAACTGGGATGGTTTAGGTTTTTGAAACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAAGAGAGAGCGTCAACTGGGATGGTTTAGGTTTTTGAAACCTC  100

seq1  AGAGCCCATCCTAGTGACATACCTCCAATAAGGCAACCCCTTCTAATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCATCCTAGTGACATACCTCCAATAAGGCAACCCCTTCTAATCCT  150

seq1  TCCCAAACAGTTCTATCAACTAGGGACCAAGCGTTCAAACACAGGAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACAGTTCTATCAACTAGGGACCAAGCGTTCAAACACAGGAGATT  200

seq1  ATGAAGCCATTCTCATTAAAACTCATCACAACTTAGGAACACTGATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCATTCTCATTAAAACTCATCACAACTTAGGAACACTGATATGT  250

seq1  AGTATGAACCAAGGACTAGGTTTAAAAAGTTAGGACAAGGTGGAGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAACCAAGGACTAGGTTTAAAAAGTTAGGACAAGGTGGAGAAAAC  300

seq1  AGGTATACTAGAGGTAGAAGAACAAAGTTAACAAAAAAAAAAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACTAGAGGTAGAAGAACAAAGTTAACAAAAAAAAAAAAAAAAAA  350

seq1  AAAAGGAGGAGCGGCTCCCTGGCTCAAGAACTGTAGAGAAATCAAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGAGCGGCTCCCTGGCTCAAGAACTGTAGAGAAATCAAGACAA  400

seq1  AATGAAGCATGTGAATTGGGTTATTCATAAGAGGTAGTGATTTGGATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCATGTGAATTGGGTTATTCATAAGAGGTAGTGATTTGGATAAG  450

seq1  AGCTGGAGCAATGGTGTAGTAATAGTGAGCAGAGTGGAGTCCTGTTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGCAATGGTGTAGTAATAGTGAGCAGAGTGGAGTCCTGTTGACA  500

seq1  TAGTCTGGGAGTGCACAGAGGTCAAGAAATGCACATAGACCATTAGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGGGAGTGCACAGAGGTCAAGAAATGCACATAGACCATTAGGATG  550

seq1  CTGGGTAAGAGAAATGCACATAGACCATTGATTGTCTTAGGATGCTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAAGAGAAATGCACATAGACCATTGATTGTCTTAGGATGCTGGGT  600

seq1  AAGAGACATGAGTATGCAGGCTTTTTAAAGTTTGGTGGATATACAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACATGAGTATGCAGGCTTTTTAAAGTTTGGTGGATATACAGTTAT  650

seq1  TAAAAGATGATTTAAAACACACCATAAATGGACTAAGGGGATGTAGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATGATTTAAAACACACCATAAATGGACTAAGGGGATGTAGAGGC  700

seq1  TGGCAGGCCATGAGTCCTCTAGATGATGCACAAGAGTCAGCAATGGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCCATGAGTCCTCTAGATGATGCACAAGAGTCAGCAATGGAAGC  750

seq1  AAGCTCAGCGTAAAGAACTCATTTCTGG-AAGGGAGAGTAAAAACCCATG  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGCTCAGCGTAAAGAACTCATTTCTGGAAAGGGAGAGTAAAAACCCATG  800

seq1  GATAGTTGAGGCTGTGGGTAAGATTGTGTGGGAAGTGTTTTAAGCCTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTGAGGCTGTGGGTAAGATTGTGTGGGAAGTGTTTTAAGCCTCAG  850

seq1  GCTTCCTGGG-AGGACTCAATGTGAGTAGGGAGAGAGG  886
      |||||||||| |||||||||||||||||||||||||||
seq2  GCTTCCTGGGAAGGACTCAATGTGAGTAGGGAGAGAGG  888