BAC Information

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BAC

Clone NameB6Ng01-147C05
Chromosome16 (Build37)
Map Location 62,889,493 - 63,035,756
singlet/doubletdoublet
Overlap genePros1
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147C05.bB6Ng01-147C05.g
ACCDH944099DH944100
length1,1381,092
definitionDH944099|Mus musculus domesticus DNA, BAC clone: B6Ng01-147C05, 5' end.DH944100|Mus musculus domesticus DNA, BAC clone: B6Ng01-147C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,034,604 - 63,035,756)(62,889,493 - 62,890,603)
sequence
gaattctagagacagcagaaaaaaatagaagtaactgaaataggagaagg
atgggaatggaaggcagaaggaagaaaaaaagaggaatagagggtgggaa
ggagcaagaagggaacaaaggaaagaaagaaggaaggaaagatagaagga
aggaagatagaaaggaaggattaggtatcaaagaaatcatagtgtaatga
atcatgtttatttgccaaaacattattgtgatatttaagaatagaaaaga
aaaaggctgatcatagaggctaacacacctaggacatcatcactcagata
ctttaatgcaagtcagaggacattgtgcccttaacaaggacttaatatca
taaagtatataataaaggtttaaatatttaccaaaagacaaaccaatcag
cgacaaacaataggaattagtggccttatattgttctgcaactaactgtt
cctgtacttatatgaaatgaggcacagaaggcaagaaatcagactgggga
ttttaagcctggggttagagataagagtacttgcctagagtgcacaagga
aggcactaaattgagttccctgggcacacacacaaaagtgaaaataaaca
tttaagagacatctggaatgggaagtgtttcatctggtagagaaagtatg
agaagttgagttgaatcacggaacttgtgagaaacagggagggcggatta
taattccagaattgaggacacagagatgggagaatggacagctcactagc
tagcaaacctagactaattagtaagctttagccaatgagacagtctacct
caaagtcttcctgaggatggcacccaagtttcatgtgtgacctgcacacc
agcattccatacacacatacattttaaaacaacatgtttttatgttgctt
acttaaagaatgacaaattcattaggtaaatcaaaccttggatgttttgc
caaagtaaagtcaacttatcagcattatcaagactgtgggcaacttttaa
tctggaaccatcaaaacaaaagtatacatgtagccacaagcataactcct
ataaatacccacacttggttagtgaacattacaagacccttcatgattct
ctaccaaccagagagaattgggcctgttttgttttttt
gaattcctctttcctatgcttggtttcaccccattacctctagccaacta
gaaatagaaaggaagtcattgggaaaatataggaatgaattctgatatta
ttgttaatatagtcttgtaaatgattaagccattaaacccaatactcttg
gaatttgaatgcagtactttatatgttttctttatttttatatattactc
tgtgtacccttggtgcaattttggagacattttgtgaagaatatttatac
tttggatcttatgagaaaattacaaaaaattgtatgcatttgtatttatg
ttataggatgactaatacactaaaagtccaagaccactgggtacacgatc
gctttgaaacatgattgctcttcagagtttttagtgtacacaatggtcag
gattctttatttatgccacctgctgagcttgggtgacttgactgtactgt
acaatgctgtatgtagttcatccttttgccaactgtaagacatcaatcaa
ttctattggtagctctctgttgagcacagcaagatcttagctttccaaag
tctatgagcccatttgtcacctctgtaggtgggtttttagcaagattcca
aagcacttaataaaatgtacttctttttgctctcttcatttttctcctct
gatgtgcaatttctgtttttgcttctttctcttcttttcatccttccaag
ttttgcccaagctggatccttcttaacttccatggtcagatgtgatggaa
tacattcagggtggtaaggctcagtcctttctttccttctctagctatga
ataccagtgttgaatatcttttttcttctttctttctttctttcttcttt
ctttctttctttctttctttctttcttcttctttctttctaagattcatt
tgtttattatatgtaagtacactgtagctatcttcagatgcaccagtaga
gggcatccatctcattacagatgggttgtgagccaccatatggttgctgt
gttttgacctcagaacttcgggaagcagtaagtgttcttaaccgctgtag
catctctccgccccgatatttttttttcatacaacaccaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63034604_63035756
seq2: B6Ng01-147C05.b_48_1185 (reverse)

seq1  AAAAAAACAAAAACAAGGCCAAATTCTCCTAGTTTGGTAGAGATTTCATT  50
      ||||||||||||   ||||| |||||||   | ||||||||||  ||| |
seq2  AAAAAAACAAAA--CAGGCCCAATTCTCTCTGGTTGGTAGAGA-ATCA-T  46

seq1  GAATGGTCTTTGTAATGGTCAACTACCAAGTTGTGGGTATTTATTAGAAG  100
      ||| |||| |||||||| |||   |||||| |||||||||||| ||| ||
seq2  GAAGGGTC-TTGTAATGTTCACTAACCAAG-TGTGGGTATTTA-TAGGAG  93

seq1  TTATTGCTTGTTGGCTACATGTATACTTTTTGTTTTTGATGGTTTCCAGA  150
      ||| |||||| |||||||||||||||||||   ||||||||| |||||||
seq2  TTA-TGCTTG-TGGCTACATGTATACTTTT--GTTTTGATGG-TTCCAGA  138

seq1  TTAAAAGTTGCCCACAGTCTTTGATAATGCTGAATAAGTTGACTTTACTT  200
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  TTAAAAGTTGCCCACAGTC-TTGATAATGCTG-ATAAGTTGACTTTACTT  186

seq1  TGGCAAAACATCCAAGGTTTGATTTACCTAATGAATTTTGTCATTCTTTA  250
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGCAAAACATCCAAGGTTTGATTTACCTAATGAA-TTTGTCATTCTTTA  235

seq1  AGTAAGCAACATAAAAACATGTTGTTTTAAAATGTATGTGTGTATGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCAACATAAAAACATGTTGTTTTAAAATGTATGTGTGTATGGAAT  285

seq1  GCTGGTGTGCAGGTCACACATGAAACTTGGGTGCCATCCTCAGGAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGTGCAGGTCACACATGAAACTTGGGTGCCATCCTCAGGAAGACT  335

seq1  TTGAGGTAGACTGTCTCATTGGCTAAAGCTTACTAATTAGTCTAGGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTAGACTGTCTCATTGGCTAAAGCTTACTAATTAGTCTAGGTTTG  385

seq1  CTAGCTAGTGAGCTGTCCATTCTCCCATCTCTGTGTCCTCAATTCTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAGTGAGCTGTCCATTCTCCCATCTCTGTGTCCTCAATTCTGGAA  435

seq1  TTATAATCCGCCCTCCCTGTTTCTCACAAGTTCCGTGATTCAACTCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCCGCCCTCCCTGTTTCTCACAAGTTCCGTGATTCAACTCAACT  485

seq1  TCTCATACTTTCTCTACCAGATGAAACACTTCCCATTCCAGATGTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACTTTCTCTACCAGATGAAACACTTCCCATTCCAGATGTCTCTT  535

seq1  AAATGTTTATTTTCACTTTTGTGTGTGTGCCCAGGGAACTCAATTTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATTTTCACTTTTGTGTGTGTGCCCAGGGAACTCAATTTAGTG  585

seq1  CCTTCCTTGTGCACTCTAGGCAAGTACTCTTATCTCTAACCCCAGGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGTGCACTCTAGGCAAGTACTCTTATCTCTAACCCCAGGCTTA  635

seq1  AAATCCCCAGTCTGATTTCTTGCCTTCTGTGCCTCATTTCATATAAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCCAGTCTGATTTCTTGCCTTCTGTGCCTCATTTCATATAAGTAC  685

seq1  AGGAACAGTTAGTTGCAGAACAATATAAGGCCACTAATTCCTATTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGTTAGTTGCAGAACAATATAAGGCCACTAATTCCTATTGTTTG  735

seq1  TCGCTGATTGGTTTGTCTTTTGGTAAATATTTAAACCTTTATTATATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGATTGGTTTGTCTTTTGGTAAATATTTAAACCTTTATTATATACT  785

seq1  TTATGATATTAAGTCCTTGTTAAGGGCACAATGTCCTCTGACTTGCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATTAAGTCCTTGTTAAGGGCACAATGTCCTCTGACTTGCATTA  835

seq1  AAGTATCTGAGTGATGATGTCCTAGGTGTGTTAGCCTCTATGATCAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTGAGTGATGATGTCCTAGGTGTGTTAGCCTCTATGATCAGCCT  885

seq1  TTTTCTTTTCTATTCTTAAATATCACAATAATGTTTTGGCAAATAAACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTATTCTTAAATATCACAATAATGTTTTGGCAAATAAACAT  935

seq1  GATTCATTACACTATGATTTCTTTGATACCTAATCCTTCCTTTCTATCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTACACTATGATTTCTTTGATACCTAATCCTTCCTTTCTATCTT  985

seq1  CCTTCCTTCTATCTTTCCTTCCTTCTTTCTTTCCTTTGTTCCCTTCTTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCTATCTTTCCTTCCTTCTTTCTTTCCTTTGTTCCCTTCTTGC  1035

seq1  TCCTTCCCACCCTCTATTCCTCTTTTTTTCTTCCTTCTGCCTTCCATTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCACCCTCTATTCCTCTTTTTTTCTTCCTTCTGCCTTCCATTCC  1085

seq1  CATCCTTCTCCTATTTCAGTTACTTCTATTTTTTTCTGCTGTCTCTAGAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTCTCCTATTTCAGTTACTTCTATTTTTTTCTGCTGTCTCTAGAA  1135

seq1  TTC  1153
      |||
seq2  TTC  1138

seq1: chr16_62889493_62890603
seq2: B6Ng01-147C05.g_68_1159

seq1  GAATTCCTCTTTCCTATGCTTGGTTTCACCCCATTACCTCTAGCCAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTCCTATGCTTGGTTTCACCCCATTACCTCTAGCCAACTA  50

seq1  GAAATAGAAAGGAAGTCATTGGGAAAATATAGGAATGAATTCTGATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAAAGGAAGTCATTGGGAAAATATAGGAATGAATTCTGATATTA  100

seq1  TTGTTAATATAGTCTTGTAAATGATTAAGCCATTAAACCCAATACTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATATAGTCTTGTAAATGATTAAGCCATTAAACCCAATACTCTTG  150

seq1  GAATTTGAATGCAGTACTTTATATGTTTTCTTTATTTTTATATATTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAATGCAGTACTTTATATGTTTTCTTTATTTTTATATATTACTC  200

seq1  TGTGTACCCTTGGTGCAATTTTGGAGACATTTTGTGAAGAATATTTATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCCTTGGTGCAATTTTGGAGACATTTTGTGAAGAATATTTATAC  250

seq1  TTTGGATCTTATGAGAAAATTACAAAAAATTGTATGCATTTGTATTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATCTTATGAGAAAATTACAAAAAATTGTATGCATTTGTATTTATG  300

seq1  TTATAGGATGACTAATACACTAAAAGTCCAAGACCACTGGGTACACGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGATGACTAATACACTAAAAGTCCAAGACCACTGGGTACACGATC  350

seq1  GCTTTGAAACATGATTGCTCTTCAGAGTTTTTAGTGTACACAATGGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAACATGATTGCTCTTCAGAGTTTTTAGTGTACACAATGGTCAG  400

seq1  GATTCTTTATTTATGCCACCTGCTGAGCTTGGGTGACTTGACTGTACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTATTTATGCCACCTGCTGAGCTTGGGTGACTTGACTGTACTGT  450

seq1  ACAATGCTGTATGTAGTTCATCCTTTTGCCAACTGTAAGACATCAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTGTATGTAGTTCATCCTTTTGCCAACTGTAAGACATCAATCAA  500

seq1  TTCTATTGGTAGCTCTCTGTTGAGCACAGCAAGATCTTAGCTTTCCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGGTAGCTCTCTGTTGAGCACAGCAAGATCTTAGCTTTCCAAAG  550

seq1  TCTATGAGCCCATTTGTCACCTCTGTAGGTGGGTTTTTAGCAAGATTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGCCCATTTGTCACCTCTGTAGGTGGGTTTTTAGCAAGATTCCA  600

seq1  AAGCACTTAATAAAATGTACTTCTTTTTGCTCTCTTCATTTTTCTCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTAATAAAATGTACTTCTTTTTGCTCTCTTCATTTTTCTCCTCT  650

seq1  GATGTGCAATTTCTGTTTTTGCTTCTTTCTCTTCTTTTCATCCTTCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCAATTTCTGTTTTTGCTTCTTTCTCTTCTTTTCATCCTTCCAAG  700

seq1  TTTTGCCCAAGCTGGATCCTTCTTAACTTCCATGGTCAGATGTGATGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCCAAGCTGGATCCTTCTTAACTTCCATGGTCAGATGTGATGGAA  750

seq1  TACATTCAGGGTGGTAAGGCTCAGTCCTTTCTTTCCTTCTCTAGCTATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCAGGGTGGTAAGGCTCAGTCCTTTCTTTCCTTCTCTAGCTATGA  800

seq1  ATACCAGTGTTGAATATCTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  850
      |||||||||||||||||||||||||         ||||||||||||||||
seq2  ATACCAGTGTTGAATATCTTTTTTC---------TTCTTTCTTTCTTTCT  841

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  900
      ||| |||||||||||||||||||||||||||||||||   ||||||||||
seq2  TTC-TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT--CTTCTTTCTTT  888

seq1  CTTAAGATTCATTTGTTTATTATATGTAAGTACACTGTAGCTATCTTCAG  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TAAGATTCATTTGTTTATTATATGTAAGTACACTGTAGCTATCTTCAG  937

seq1  ATGCACCAGAAGAGGGCATCCAATCTCATTACAGAT-GGTTGTGAGCCAC  999
      ||||||||| ||||||||||| |||||||||||||| |||||||||||||
seq2  ATGCACCAGTAGAGGGCATCC-ATCTCATTACAGATGGGTTGTGAGCCAC  986

seq1  CATATGGTTGCTGGGTTTTGAACTCAGGACCTTCGGGAAAGCAGTCAGTG  1049
      ||||||||||||| ||||||| |||| || ||||||| ||||||| ||||
seq2  CATATGGTTGCTGTGTTTTGACCTCA-GAACTTCGGG-AAGCAGTAAGTG  1034

seq1  TTCTTAACCGCTGAGCCATCTCTCCAGCCCCGAATATCTTTTTTCAATAG  1099
      |||||||||||||   ||||||||| |||||| |||| ||||||  ||| 
seq2  TTCTTAACCGCTGTAGCATCTCTCC-GCCCCG-ATATTTTTTTTTCATA-  1081

seq1  CACACACCAAGA  1111
      || |||||||||
seq2  CA-ACACCAAGA  1092