BAC Information

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BAC

Clone NameB6Ng01-147D19
Chromosome16 (Build37)
Map Location 77,491,089 - 77,492,234
singlet/doubletsinglet
Overlap genenone
Upstream gene1700063K16Rik, LOC665120, Usp25
Downstream gene2810055G20Rik, LOC435483, LOC100039561, Cxadr, Btg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D19.bB6Ng01-147D19.g
ACCDH944175DH944176
length1,1221,177
definitionDH944175|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D19, 5' end.DH944176|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctctattacccagcagagatgtgatactcaggacttcaaaa
gggtaattacttctcatctagttcatattgtatactttgggggtatatga
aagtaggcccgaagcccaaacggttgaatttaaagtaccccgtgggccat
agctaaggagtttaataaacttaagtttccagttacttaagccaaaagtt
tatgtttgagaaatattagctggcagtcttataagtaaattctcggcatt
ggggatagatggttaagcaaagcataactttgagggttctaagggaaaat
aaaagttgttgggagacagattggcgtcttctccacagggcagctctata
tccatcctccttgctctccctccagccaaagacagtcctcccacatcaag
agaactagtaccattcgggaagacatgatgagcatttgactaagaaataa
cgccacagcattctgcactgatcgtatttgacttagactgttgagactgg
aaaagtgattcactggagaaaaactcattaccaaactatctcatagtctc
acttgccttttatgaggagtacactttcagtattattatgggcagtgttc
acaggtcactatgacgatccgtcatgtttatcagacgagtgtcatagctt
ccacaaaggagagtagcaaaacgcctgaactatttatttaagactgacat
actgaattcagtgaaaaagacaaattagacattagttgctgaagacacca
cccaagtctgttttaacacattctttgtgaaaataaaatagaatgttgaa
gttgaaaagcactaagtatcttcctcactggctgtagaggtaatgaatag
agtcagatccttgcaggtaagcacacacataaaaataaataaataaactc
tttaaaaaacacaaatctttttaaaaatactagaaacatcagaaattagc
attcatacaacaaggatgaatacgagcagacaatttaactagcagtgtcc
atgaaaataatacttgtatacgctagtagctgtatttattgcattttata
ttttttaatgactattttagtccaatttaagaagaacaacaatcttgaag
ttcttcttctttgagtatgtct
gaattcatcaggaaccaagagttcagcaagaaggagcaaagaactatgat
tctgctattgcccatgttataagctgcttcccattcttgtgaaggctcag
ccacagacaactcaaactgatgtgagatcattatttcaatggttgtgtga
caggcagcagacagcacttccaagtcctttttctttatcttttccctgga
aatgtttttccaagccctttattgcgatgtcccctgtttttagaaaggat
tgtatgtcttatgtagggttaagcattcagccacccctggttctcagcat
gttaaacacccacgaggttttgtattcatttacctcacttatttaaaagg
gacactcctctgattaaagctgagaatagtatttctctatgggcatagac
ataaatatttagaagatcgtttgatattatgccaatttagctcttcagca
gtagtcatttcctccataaggcctaagacctcctcttccattttttttta
aaaccaggtttatggtaccaagtgtgaatgtgttttgggcttcaggttaa
ttgacagtagagttgattactcccttaacacatgtgtcattaatatataa
gtatacacattttacatggcaggttggtgctatagttcctagtgttcaca
gctgggtaagactctcaccccttcaccccctcagcagtctacgtgtcacc
cctgacgatgcgatggcttttatattctgaaaaaccttccaactcacttc
cagtttgatttctctgtagttttcattgaagatgtatggtttctacagca
gtagtgtctactatctaatcctgatgagcaaccaagagtgatagcaaaga
cctgtttgtttgtgggaactttggagaagtaaacttataagaaagtactc
catgccctgtactttgattttgtttaataatccatgagtttttgggtgca
gcactgtccagctatgtagatttcacccttgttaattcttcgtgttatct
gtgagttttaattggatcacaaatttaaggatcacaaattaacaatggat
tttcattcttcttttgttcttgtccttccctccatctgctccattactca
ctccatcctgaatacctcttgtctctgttaatggttcccactgagattta
tgatggtctgtttcacatatactctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_77491089_77492234
seq2: B6Ng01-147D19.b_48_1169 (reverse)

seq1  AGACACATTACTCAGAAGAAGAAGAACTATTCAAGATTGTTTGGTTTCCT  50
      |||||   |||||| ||||||||||||  ||||||||||||  |||  ||
seq2  AGACA---TACTCA-AAGAAGAAGAAC--TTCAAGATTGTT--GTT--CT  40

seq1  CTCTAAAATGTGGACTAGATTAGTCATTTAAAAAAATATTAAAATGCCAT  100
       ||| |||| ||||||| | ||||||||  |||||||| |||||||| ||
seq2  -TCTTAAAT-TGGACTAAAATAGTCATT--AAAAAATA-TAAAATGCAAT  85

seq1  TAAAATACAGGCTACTAGCGTATTACAAAGTATATATTTCATGGAACACC  150
        ||||||| |||||||||||| ||| ||||||   |||||||| ||| |
seq2  --AAATACA-GCTACTAGCGTA-TAC-AAGTATTATTTTCATGG-ACA-C  128

seq1  TGCTAGTTTAAATTGTCCTGCTCGTATTCATCCTTGTTGTATGAATGCTA  200
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  TGCTAG-TTAAATTGT-CTGCTCGTATTCATCCTTGTTGTATGAATGCTA  176

seq1  ATTTCTGATGTTTCTAGTATTTTTAAAAAGATTTGTGTTTTTTAAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGATGTTTCTAGTATTTTTAAAAAGATTTGTGTTTTTTAAAGAGT  226

seq1  TTATTTATTTATTTTTATGTGTGTGCTTACCTGCAAGGATCTGACTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTTTATGTGTGTGCTTACCTGCAAGGATCTGACTCTAT  276

seq1  TCATTACCTCTACAGCCAGTGAGGAAGATACTTAGTGCTTTTCAACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACCTCTACAGCCAGTGAGGAAGATACTTAGTGCTTTTCAACTTCA  326

seq1  ACATTCTATTTTATTTTCACAAAGAATGTGTTAAAACAGACTTGGGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTATTTTATTTTCACAAAGAATGTGTTAAAACAGACTTGGGTGGT  376

seq1  GTCTTCAGCAACTAATGTCTAATTTGTCTTTTTCACTGAATTCAGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGCAACTAATGTCTAATTTGTCTTTTTCACTGAATTCAGTATGT  426

seq1  CAGTCTTAAATAAATAGTTCAGGCGTTTTGCTACTCTCCTTTGTGGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTAAATAAATAGTTCAGGCGTTTTGCTACTCTCCTTTGTGGAAGC  476

seq1  TATGACACTCGTCTGATAAACATGACGGATCGTCATAGTGACCTGTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACACTCGTCTGATAAACATGACGGATCGTCATAGTGACCTGTGAAC  526

seq1  ACTGCCCATAATAATACTGAAAGTGTACTCCTCATAAAAGGCAAGTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATAATAATACTGAAAGTGTACTCCTCATAAAAGGCAAGTGAGA  576

seq1  CTATGAGATAGTTTGGTAATGAGTTTTTCTCCAGTGAATCACTTTTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGATAGTTTGGTAATGAGTTTTTCTCCAGTGAATCACTTTTCCAG  626

seq1  TCTCAACAGTCTAAGTCAAATACGATCAGTGCAGAATGCTGTGGCGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAGTCTAAGTCAAATACGATCAGTGCAGAATGCTGTGGCGTTAT  676

seq1  TTCTTAGTCAAATGCTCATCATGTCTTCCCGAATGGTACTAGTTCTCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTCAAATGCTCATCATGTCTTCCCGAATGGTACTAGTTCTCTTG  726

seq1  ATGTGGGAGGACTGTCTTTGGCTGGAGGGAGAGCAAGGAGGATGGATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGAGGACTGTCTTTGGCTGGAGGGAGAGCAAGGAGGATGGATATA  776

seq1  GAGCTGCCCTGTGGAGAAGACGCCAATCTGTCTCCCAACAACTTTTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCCCTGTGGAGAAGACGCCAATCTGTCTCCCAACAACTTTTATTT  826

seq1  TCCCTTAGAACCCTCAAAGTTATGCTTTGCTTAACCATCTATCCCCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAGAACCCTCAAAGTTATGCTTTGCTTAACCATCTATCCCCAATG  876

seq1  CCGAGAATTTACTTATAAGACTGCCAGCTAATATTTCTCAAACATAAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAATTTACTTATAAGACTGCCAGCTAATATTTCTCAAACATAAACT  926

seq1  TTTGGCTTAAGTAACTGGAAACTTAAGTTTATTAAACTCCTTAGCTATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTAAGTAACTGGAAACTTAAGTTTATTAAACTCCTTAGCTATGG  976

seq1  CCCACGGGGTACTTTAAATTCAACCGTTTGGGCTTCGGGCCTACTTTCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGGGTACTTTAAATTCAACCGTTTGGGCTTCGGGCCTACTTTCAT  1026

seq1  ATACCCCCAAAGTATACAATATGAACTAGATGAGAAGTAATTACCCTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCCAAAGTATACAATATGAACTAGATGAGAAGTAATTACCCTTTT  1076

seq1  GAAGTCCTGAGTATCACATCTCTGCTGGGTAATAGAGAATGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCTGAGTATCACATCTCTGCTGGGTAATAGAGAATGAATTC  1122