BAC Information

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BAC

Clone NameB6Ng01-147D21
Chromosome16 (Build37)
Map Location 85,827,516 - 85,950,493
singlet/doubletdoublet
Overlap geneAdamts5
Upstream geneAtp5j, LOC100039950, Gabpa, Gm311, App, Cyyr1, LOC100039994, LOC622000, Adamts1
Downstream geneLOC100040025, LOC100039780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D21.bB6Ng01-147D21.g
ACCDH944177DH944178
length5171,040
definitionDH944177|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D21, 5' end.DH944178|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,949,971 - 85,950,493)(85,827,516 - 85,828,571)
sequence
ctgcccttcttgccactgcctcccaagtgttataattataagtctgtgtc
actatgcccagttcatagggtactgaatatcaaactcggggggggggggc
atagtagcaaatttccctaaaagtaatgcattactccagaacacatactt
taaaaggaagaagaaatgtatacaataacagtctagagacataattagat
gtgatcctcacgatacagaatctttcatggaaatgtctaaaactttgaat
ttttcatcataaacatatctctttaaggtaaaaataatatgatgttttgt
ataccatatcacaattaaagaagaaaggaattcaggtagaatttttaaaa
actgataaagaatgatggagcaacctaaatgctttctatccttgtcaact
aatatgccctcctcatcctctggggaatatactatcttattttagatgct
gatctttaatttcttaattttatcaatcaaggcagggggtagaatgggga
gaaagtgtgtgtggggg
gaattctcaggtctgacatacatgtctggagaaactgacttgaaaagaat
cagaaataaaacccattgcagacggccacagaggagctcttggagatatc
ctgtagtgggagtgtctacccaggggtccctgtggaagcagttcagtcag
caactgacaggcttcttgttccttgggtcaaggtttcaattccatggagc
tcaaattattgcccatcacggggaacatctctactgtttagggaggagag
gacaaggcccctaattacagtcttcaaaaaaggaaggggcaattcctcaa
acatttggaaagcactctgctcttaggaagagaaggatgcaagccagaca
aataattacaaatgtccagttattttcttctttgtttcctgcctttaaag
agccatggaaatgaaatggaagctttataaagcacagacaaaaaatacct
cttatagttttaactactttgctcatccaaaaggtagtctaatttttaac
ttttagaaaataatgtggacatttttaaaagcagtagggcactgatacca
aaataataggacatctcctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttctttttttctttctttctttctgatta
ttttacttatttacatttcaaacattgttcccccttcatgatcccccctc
cacaaaaccatagttggaagaaaacacagattagatggaatagaaacggg
acaggtgaagggaaggacagggaagggagtatctgaagaaagtagggagt
agacacaaagcaagctctagcactacttggatggacttcaggacaacact
caaacccaatctgccatcctcgaacatccttagggaacacccaccactaa
ttacagactagatacgcaagcagccacttctgggctgtgagcccacatcc
ctcatcctgccggcaggtttaaaatgtggctgtacttgtttgtttggttg
gtggagacagcttcattactcccttggcctcagttgatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_85949971_85950493
seq2: B6Ng01-147D21.b_47_569 (reverse)

seq1  CCCCCACACACACTTTCTCCCCATTCTACCCCCTGCCTTGATTGATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACACACACTTTCTCCCCATTCTACCCCCTGCCTTGATTGATAAAA  50

seq1  TTAAGAAATTAAAGATCAGCATCTAAAATAAGATAGTATATTCCCCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATTAAAGATCAGCATCTAAAATAAGATAGTATATTCCCCAGAG  100

seq1  GATGAGGAGGGCATATTAGTTGACAAGGATAGAAAGCATTTAGGTTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGAGGGCATATTAGTTGACAAGGATAGAAAGCATTTAGGTTGCTC  150

seq1  CATCATTCTTTATCAGTTTTTAAAAATTCTACCTGAATTCCTTTCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCTTTATCAGTTTTTAAAAATTCTACCTGAATTCCTTTCTTCTT  200

seq1  TAATTGTGATATGGTATACAAAACATCATATTATTTTTACCTTAAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGATATGGTATACAAAACATCATATTATTTTTACCTTAAAGAGA  250

seq1  TATGTTTATGATGAAAAATTCAAAGTTTTAGACATTTCCATGAAAGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTATGATGAAAAATTCAAAGTTTTAGACATTTCCATGAAAGATTC  300

seq1  TGTATCGTGAGGATCACATCTAATTATGTCTCTAGACTGTTATTGTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCGTGAGGATCACATCTAATTATGTCTCTAGACTGTTATTGTATAC  350

seq1  ATTTCTTCTTCCTTTTAAAGTATGTGTTCTGGAGTAATGCATTACTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTTCCTTTTAAAGTATGTGTTCTGGAGTAATGCATTACTTTTA  400

seq1  GGGAAATTTGCTACTATGCCCCCCCCCCCCGAGTTTGATATTCAGTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTTGCTACTATGCCCCCCCCCCCCGAGTTTGATATTCAGTACCC  450

seq1  TATGAACTGGGCATAGTGACACAGACTTATAATTATAACACTTGGGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTGGGCATAGTGACACAGACTTATAATTATAACACTTGGGAGGC  500

seq1  AGTGGCAAGAAGGGCAGGAATTC  523
      |||||||||||||||||||||||
seq2  AGTGGCAAGAAGGGCAGGAATTC  523

seq1: chr16_85827516_85828571
seq2: B6Ng01-147D21.g_69_1108

seq1  GAATTCTCAGGTCTGACATACATGTCTGGAGAAACTGACTTGAAAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGTCTGACATACATGTCTGGAGAAACTGACTTGAAAAGAAT  50

seq1  CAGAAATAAAACCCATTGCAGACGGCCACAGAGGAGCTCTTGGAGATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAAACCCATTGCAGACGGCCACAGAGGAGCTCTTGGAGATATC  100

seq1  CTGTAGTGGGAGTGTCTACCCAGGGGTCCCTGTGGAAGCAGTTCAGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTGGGAGTGTCTACCCAGGGGTCCCTGTGGAAGCAGTTCAGTCAG  150

seq1  CAACTGACAGGCTTCTTGTTCCTTGGGTCAAGGTTTCAATTCCATGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGACAGGCTTCTTGTTCCTTGGGTCAAGGTTTCAATTCCATGGAGC  200

seq1  TCAAATTATTGCCCATCACGGGGAACATCTCTACTGTTTAGGGAGGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATTGCCCATCACGGGGAACATCTCTACTGTTTAGGGAGGAGAG  250

seq1  GACAAGGCCCCTAATTACAGTCTTCAAAAAAGGAAGGGGCAATTCCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGCCCCTAATTACAGTCTTCAAAAAAGGAAGGGGCAATTCCTCAA  300

seq1  ACATTTGGAAAGCACTCTGCTCTTAGGAAGAGAAGGATGCAAGCCAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGAAAGCACTCTGCTCTTAGGAAGAGAAGGATGCAAGCCAGACA  350

seq1  AATAATTACAAATGTCCAGTTATTTTCTTCTTTGTTTCCTGCCTTTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACAAATGTCCAGTTATTTTCTTCTTTGTTTCCTGCCTTTAAAG  400

seq1  AGCCATGGAAATGAAATGGAAGCTTTATAAAGCACAGACAAAAAATACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGAAATGAAATGGAAGCTTTATAAAGCACAGACAAAAAATACCT  450

seq1  CTTATAGTTTTAACTACTTTGCTCATCCAAAAGGTAGTCTAATTTTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTTTTAACTACTTTGCTCATCCAAAAGGTAGTCTAATTTTTAAC  500

seq1  TTTTAGAAAATAATGTGGACATTTTTAAAAGCAGTAGGGCACTGATACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAAATAATGTGGACATTTTTAAAAGCAGTAGGGCACTGATACCA  550

seq1  AAATAATAGGACATCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  600
      |||||||||||||||||        |||||||||||||||||||||||||
seq2  AAATAATAGGACATCTC--------CTTTCTTTCTTTCTTTCTTTCTTTC  592

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTT  642

seq1  TCTGATTATTTTACTTATTTACATTTCAAACATTGTTCCCCCTTCATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTATTTTACTTATTTACATTTCAAACATTGTTCCCCCTTCATGAT  692

seq1  CCCCCCTCCACAAAACCATAGTTGGAAGAAAACACAGATTAGATGGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCCACAAAACCATAGTTGGAAGAAAACACAGATTAGATGGAATA  742

seq1  GAAACGGGACAGGTGAAGGGAAGGACAGGGAAGGGAGTATCTGAAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGGGACAGGTGAAGGGAAGGACAGGGAAGGGAGTATCTGAAGAAAG  792

seq1  TAGGGAGTAGACACAAAGCAAGCTCTAGCACTACTTGGATGGACTTCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTAGACACAAAGCAAGCTCTAGCACTACTTGGATGGACTTCAGG  842

seq1  ACAACACTCAAACCCAATCTGCCATCCTCGAACATCCTTAGGGAACACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTCAAACCCAATCTGCCATCCTCGAACATCCTTAGGGAACACCC  892

seq1  ACCACTAATTACAGGACTAAGATACGCAAGCAGCCACTTCTGGGCTGTGA  950
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  ACCACTAATTACA-GACT-AGATACGCAAGCAGCCACTTCTGGGCTGTGA  940

seq1  GGCCCCACATCCCTCATCCTGCCGGCAGGGTTTAAAATGTGGCTGTACTT  1000
      |  |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  G--CCCACATCCCTCATCCTGCCGGCA-GGTTTAAAATGTGGCTGTACTT  987

seq1  GTTTGTTTGGTGGTGGGAGACAGCTTCAATTTACTTCCCTTGGCCTCAGT  1050
      ||||||||||| |  |||||||||||||  |||| |||||||||||||||
seq2  GTTTGTTTGGTTGGTGGAGACAGCTTCA--TTAC-TCCCTTGGCCTCAGT  1034

seq1  GGATGT  1056
       |||||
seq2  TGATGT  1040