BAC Information

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BAC

Clone NameB6Ng01-147H10
Chromosome16 (Build37)
Map Location 30,608,340 - 30,726,289
singlet/doubletdoublet
Overlap genenone
Upstream geneOpa1, Gm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623
Downstream geneLOC100043122, AI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147H10.bB6Ng01-147H10.g
ACCDH944339DH944340
length685149
definitionDH944339|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H10, 5' end.DH944340|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,608,340 - 30,609,024)(30,726,141 - 30,726,289)
sequence
gaattccagcaacaacccgtcactggtgcccatcatctgattccagtcga
ggagcgcttctctttggaagagcctctgtttgtgcctggacagcttgtct
ggaagagattaccatgtcatgtgggacccaacctggctttctcacatctg
aggcaattggtcagtggaggaactagcagagtttttgactcagtgggctt
aagagtctctgcggggctcccacataccacacatgtccacaaaatgtgtt
ccagtgcccaaggaggccaaacgtgtagacacaaggacacaaccagttaa
gagcaggaaactgtaggtaagtatttacacagcacaagggagtttatgga
ttaacattgccatcagaatgtaaggtgtccacagcagttctgggccatct
ccacagcagtctctcccatcagctgtggcagaggggtgtatcactgtcct
ggcttctctgtatgattaataattccatacacactccttgagacagtggt
ttagaggtgtggaagatctgaggtttttctgggagacattatatatggaa
aagagtacacacaggctctctcagaatttgtgtgtgtgtgtgtgtgtgtg
tgtgagagaccatgctctctctgtgtatgtgtgcacatgcatgcgtacgt
gtgtatgtacatgtgtgagcttttgtgcctgcctg
tacatctatcctcagactcagtgaggcccaaggggtttgccagagaaaaa
gttcaatccaaaccactctcattgtcctaccactcagccttccaaagaga
agagacaaggcatgggagaagggaactggggaggaggtgtgggggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_30608340_30609024
seq2: B6Ng01-147H10.b_46_730

seq1  GAATTCCAGCAACAACCCGTCACTGGTGCCCATCATCTGATTCCAGTCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAACAACCCGTCACTGGTGCCCATCATCTGATTCCAGTCGA  50

seq1  GGAGCGCTTCTCTTTGGAAGAGCCTCTGTTTGTGCCTGGACAGCTTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGCTTCTCTTTGGAAGAGCCTCTGTTTGTGCCTGGACAGCTTGTCT  100

seq1  GGAAGAGATTACCATGTCATGTGGGACCCAACCTGGCTTTCTCACATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGATTACCATGTCATGTGGGACCCAACCTGGCTTTCTCACATCTG  150

seq1  AGGCAATTGGTCAGTGGAGGAACTAGCAGAGTTTTTGACTCAGTGGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATTGGTCAGTGGAGGAACTAGCAGAGTTTTTGACTCAGTGGGCTT  200

seq1  AAGAGTCTCTGCGGGGCTCCCACATACCACACATGTCCACAAAATGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTCTGCGGGGCTCCCACATACCACACATGTCCACAAAATGTGTT  250

seq1  CCAGTGCCCAAGGAGGCCAAACGTGTAGACACAAGGACACAACCAGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCCCAAGGAGGCCAAACGTGTAGACACAAGGACACAACCAGTTAA  300

seq1  GAGCAGGAAACTGTAGGTAAGTATTTACACAGCACAAGGGAGTTTATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAAACTGTAGGTAAGTATTTACACAGCACAAGGGAGTTTATGGA  350

seq1  TTAACATTGCCATCAGAATGTAAGGTGTCCACAGCAGTTCTGGGCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTGCCATCAGAATGTAAGGTGTCCACAGCAGTTCTGGGCCATCT  400

seq1  CCACAGCAGTCTCTCCCATCAGCTGTGGCAGAGGGGTGTATCACTGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAGTCTCTCCCATCAGCTGTGGCAGAGGGGTGTATCACTGTCCT  450

seq1  GGCTTCTCTGTATGATTAATAATTCCATACACACTCCTTGAGACAGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTCTGTATGATTAATAATTCCATACACACTCCTTGAGACAGTGGT  500

seq1  TTAGAGGTGTGGAAGATCTGAGGTTTTTCTGGGAGACATTATATATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGTGTGGAAGATCTGAGGTTTTTCTGGGAGACATTATATATGGAA  550

seq1  AAGAGTACACACAGGCTCTCTCAGAATTTGTGTGTGTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTACACACAGGCTCTCTCAGAATTTGTGTGTGTGTGTGTGTGTGTG  600

seq1  TGTGAGAGACCATGCTCTCTCTGTGTATGTGTGCACATGCATGCGTACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGACCATGCTCTCTCTGTGTATGTGTGCACATGCATGCGTACGT  650

seq1  GTGTATGTACATGTGTGTGCTTTTGTGCCTGCCTG  685
      ||||||||||||||||| |||||||||||||||||
seq2  GTGTATGTACATGTGTGAGCTTTTGTGCCTGCCTG  685

seq1: chr16_30726141_30726289
seq2: B6Ng01-147H10.g_76_224 (reverse)

seq1  CCTTCCCCCACACCTCCTCCCCAGTTCCCTTCTCCCATGCCTTGTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCACACCTCCTCCCCAGTTCCCTTCTCCCATGCCTTGTCTCTT  50

seq1  CTCTTTGGAAGGCTGAGTGGTAGGACAATGAGAGTGGTTTGGATTGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGAAGGCTGAGTGGTAGGACAATGAGAGTGGTTTGGATTGAACT  100

seq1  TTTTCTCTGGCAAACCCCTTGGGCCTCACTGAGTCTGAGGATAGATGTA  149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGGCAAACCCCTTGGGCCTCACTGAGTCTGAGGATAGATGTA  149