BAC Information

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BAC

Clone NameB6Ng01-147O24
Chromosome16 (Build37)
Map Location 69,056,083 - 69,142,612
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147O24.bB6Ng01-147O24.g
ACCDH944680DH944681
length1,1641,119
definitionDH944680|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O24, 5' end.DH944681|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,056,083 - 69,057,253)(69,141,502 - 69,142,612)
sequence
gaattcaaaggattttctttctcatgggcattgattcctctggcaataaa
tgaataaaggatattgcactcttcaaacacctctaatttaaatcaactta
atcaacgcatttcattgaaagattctgcagtacaattatagccctaatgt
gtaatggagttcatttcaggcctacaaccaaagagtaattgcattacatg
tattttcttatggaaaccatttactgccttcaggtatttttaaagtatga
tttcttttatatgatgcaattttgagtcacatagagcaccttttgcatat
aatattcaaatatcatttttcttcatctgatcaaaacctagattaagaat
atgaagaatagattcatcagtaaaacctacattcattattaaaatggcta
atgattctttataataacaaatgtaatctttcatttcattttctcatttt
aagggtttattctacaatgggaaatttttattttatatctgacatgtcga
actattatatcttgatgattgttttgttgcttcatgctcttgagtattat
ttaactatacagaaaatacatttttcatacttgactgaagcattcatact
ttcggaaatagtgtacatggtgaatttttctgaaaataaaaagtgcaata
acaaacatcatagcaaaacttgcatttatgaatgaaagtcatatatcaaa
atcaattgatgacctcaaaccactaattacttcttgaatatttatatatt
taataactaaggatgatcttcctttaatgcaatatatttaagctaattat
attaaatataatattattttattccattctttctcatatgcagtttttgt
attctaggtataggttatctttttttatataaaaaccttttatcttacac
taatgcatgatttccactagctccttttattccttgcagaaatccaaata
aatactttttaaagaatatatcattttttataagacagaataaaagatat
tttaattttgagcgattttgagtggccatgtgtccaaaaaacacagaatt
ttaggtaaagcaattctgttcccacatagaaacaggttcatgaagatttt
atatcttcaggaatggaaaaagtcatctattaagtgaccttaaattcttg
atgaatgataagaa
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacatggct
ctcctcagagattactagcggcacccacgcaattgctcgcagcacgtacc
ggctctccacatgtacacatatgtatatatgaattacatatatgtttgta
tgttctatgtagtatataaatacatatgcatataaatacatctgtgtgtg
tgtaattaatgaaatgtgaggttacaaatttgaaagagagtaaggaggaa
tatttggaagagtttggagggagaaaagagaagaaaacaatgtaattata
gtctacttaataacacaagttatttttttaaacatctataattctcaaaa
agtaaataatacattatttttaaatggattattatattcatgttacaatt
ttagtgtgtacagaaaacctgatgattttaaaataatattattctttata
aatgtatcatagtacaaacatctaaaactacattgaaatatttatacctt
gtatgaatctttgtgggcagtaatttgagatttctagaattcatttaaat
gcaaatctcaaagatagtttattccttcaaaatttgctctgctatcatga
aagccatttgctgagttattttccatatgttttaatgaggaaaaacaaaa
acaaaacaaaattttttccttaaactttgaactactattccattagctta
tttatatcagaaaaataaatagaaagttactgtcttttttgtctgaaaaa
taattcataaatggaaaaaaaatctcattggctttataatttctcagctc
aaaaatgacatttaatattttcataaatcagtgctaaaactaaccttata
accagtttcttgtattttctgaatgatcacagaaagtggggacaatcata
ttgtagtgctacctttgtcaaatatacactttggggaaggaaattataga
agaaaggtaaatgtttatgagtgactaacctttttattccggaatctaga
attgtttttatcctaatttaaccccttactcttgtattctaaaaagaatc
taaatttgaatatcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69056083_69057253
seq2: B6Ng01-147O24.b_49_1212

seq1  GAATTCAAAGGATTTTCTTTCTCATGGGCATTGATTCCTCTGGCAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGATTTTCTTTCTCATGGGCATTGATTCCTCTGGCAATAAA  50

seq1  TGAATAAAGGATATTGCACTCTTCAAACACCTCTAATTTAAATCAACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAGGATATTGCACTCTTCAAACACCTCTAATTTAAATCAACTTA  100

seq1  ATCAACGCATTTCATTGAAAGATTCTGCAGTACAATTATAGCCCTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACGCATTTCATTGAAAGATTCTGCAGTACAATTATAGCCCTAATGT  150

seq1  GTAATGGAGTTCATTTCAGGCCTACAACCAAAGAGTAATTGCATTACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGAGTTCATTTCAGGCCTACAACCAAAGAGTAATTGCATTACATG  200

seq1  TATTTTCTTATGGAAACCATTTACTGCCTTCAGGTATTTTTAAAGTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTATGGAAACCATTTACTGCCTTCAGGTATTTTTAAAGTATGA  250

seq1  TTTCTTTTATATGATGCAATTTTGAGTCACATAGAGCACCTTTTGCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTATATGATGCAATTTTGAGTCACATAGAGCACCTTTTGCATAT  300

seq1  AATATTCAAATATCATTTTTCTTCATCTGATCAAAACCTAGATTAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAAATATCATTTTTCTTCATCTGATCAAAACCTAGATTAAGAAT  350

seq1  ATGAAGAATAGATTCATCAGTAAAACCTACATTCATTATTAAAATGGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAATAGATTCATCAGTAAAACCTACATTCATTATTAAAATGGCTA  400

seq1  ATGATTCTTTATAATAACAAATGTAATCTTTCATTTCATTTTCTCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTTTATAATAACAAATGTAATCTTTCATTTCATTTTCTCATTTT  450

seq1  AAGGGTTTATTCTACAATGGGAAATTTTTATTTTATATCTGACATGTCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTATTCTACAATGGGAAATTTTTATTTTATATCTGACATGTCGA  500

seq1  ACTATTATATCTTGATGATTGTTTTGTTGCTTCATGCTCTTGAGTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATATCTTGATGATTGTTTTGTTGCTTCATGCTCTTGAGTATTAT  550

seq1  TTAACTATACAGAAAATACATTTTTCATACTTGACTGAAGCATTCATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATACAGAAAATACATTTTTCATACTTGACTGAAGCATTCATACT  600

seq1  TTCGGAAATAGTGTACATGGTGAATTTTTCTGAAAATAAAAAGTGCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGAAATAGTGTACATGGTGAATTTTTCTGAAAATAAAAAGTGCAATA  650

seq1  ACAAACATCATAGCAAAACTTGCATTTATGAATGAAAGTCATATATCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATCATAGCAAAACTTGCATTTATGAATGAAAGTCATATATCAAA  700

seq1  ATCAATTGATGACCTCAAACCACTAATTACTTCTTGAATATTTATATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGATGACCTCAAACCACTAATTACTTCTTGAATATTTATATATT  750

seq1  TAATAACTAAGGATGATCTTCCTTTAATGCAATATATTTAAGCTAATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTAAGGATGATCTTCCTTTAATGCAATATATTTAAGCTAATTAT  800

seq1  ATTAAATATAATATTATTTTATTCCATTCTTTCTCATATGCAGTTTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATAATATTATTTTATTCCATTCTTTCTCATATGCAGTTTTTGT  850

seq1  ATTCTAGGTATAGGTTATC-TTTTTTATATAAAAACCTTTTATCTTACAC  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTCTAGGTATAGGTTATCTTTTTTTATATAAAAACCTTTTATCTTACAC  900

seq1  TAATGCAATGATTTCCACTAGCTCCTTTTATTCCTTGCAGAAAATCCAAA  949
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  TAATGC-ATGATTTCCACTAGCTCCTTTTATTCCTTGCAG-AAATCCAAA  948

seq1  TAAATACTTTTTAAAGAAT-TATAATCATTTTTATAAGACAGAAATAAAA  998
      ||||||||||||||||||| ||| ||  |||||||||||||| |||||||
seq2  TAAATACTTTTTAAAGAATATATCAT--TTTTTATAAGACAG-AATAAAA  995

seq1  GATA-TTTAATTTTGAGCGATTTTGAGTGGCCA--TGTCCAAAAAACACA  1045
      |||| ||||||||||||||||||||||||||||  |||||||||||||||
seq2  GATATTTTAATTTTGAGCGATTTTGAGTGGCCATGTGTCCAAAAAACACA  1045

seq1  GA--TTTAGGTAAAGCCAAATTCTGTTTCCCAACATAGAAACAGTTTCAT  1093
      ||  ||||||||||||  |||||||||  || |||||||||||| |||||
seq2  GAATTTTAGGTAAAGC--AATTCTGTT--CCCACATAGAAACAGGTTCAT  1091

seq1  GAAGATTTTATATCTTTAAAGAATAGAAAAAGTCATTCATTAAGTGAACT  1143
      |||||||||||||| || | |||| |||||||||||  ||||||||| ||
seq2  GAAGATTTTATATC-TTCAGGAATGGAAAAAGTCATCTATTAAGTGACCT  1140

seq1  TTAAAATATCTTGATGGATAGATAAGAA  1171
      |  |||| |||||||| || ||||||||
seq2  T--AAAT-TCTTGATGAAT-GATAAGAA  1164

seq1: chr16_69141502_69142612
seq2: B6Ng01-147O24.g_67_1185 (reverse)

seq1  TTTCTG-GATTCTAATTT-GATTCTTTTAAGAATACAAGAGTAAGGG--T  46
      ||||||  |||| ||||| ||||||||| ||||||||||||||||||  |
seq2  TTTCTGATATTCAAATTTAGATTCTTTTTAGAATACAAGAGTAAGGGGTT  50

seq1  TAATTAGATTAAAAAACAATTCTAGATTCCGGAAT-AAAGGTTTAGTCAC  95
       ||||||  | |||||||||||||||||||||||| ||| | ||||||||
seq2  AAATTAGGAT-AAAAACAATTCTAGATTCCGGAATAAAAAGGTTAGTCAC  99

seq1  TCATAAACATTTACCTTTC-TCTATAATTTCCT--CCCCAAGTGTATATT  142
      ||||||||||||||||||| |||||||||||||  ||| ||||||||| |
seq2  TCATAAACATTTACCTTTCTTCTATAATTTCCTTCCCCAAAGTGTATA-T  148

seq1  TTGACAAAGGTAGCACTACATTATGATTGT-CCCACTTTCTGTGATCATT  191
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TTGACAAAGGTAGCACTACAATATGATTGTCCCCACTTTCTGTGATCATT  198

seq1  CAGAAATTACAAGAAACTGGTTATAAGGTTAGTTTTAGCACTGATTTATG  241
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATACAAGAAACTGGTTATAAGGTTAGTTTTAGCACTGATTTATG  248

seq1  AAAATATTAAATGTCATTTTTGAGCTGAGAAATTATAAAGCCAATGAGAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAAATGTCATTTTTGAGCTGAGAAATTATAAAGCCAATGAGAT  298

seq1  TTTTTTTCCATTTATGAATTATTTTTCAGACAAAAAAGACAGTAACTTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCATTTATGAATTATTTTTCAGACAAAAAAGACAGTAACTTTC  348

seq1  TA-TTATTTTTCTGATATAAATAAGCTAATGGAATAGTAGTTCAAAGTTT  390
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTTCTGATATAAATAAGCTAATGGAATAGTAGTTCAAAGTTT  398

seq1  AAGGAAAAAATTTTGTTTTGTTTTTGTTTTTCCTCATTAAAACATATGGA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAAATTTTGTTTTGTTTTTGTTTTTCCTCATTAAAACATATGGA  448

seq1  AAATAACTCAGCAAATGGCTTTCATGATAGCAGAGCAAATTTTGAAGGAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCAGCAAATGGCTTTCATGATAGCAGAGCAAATTTTGAAGGAA  498

seq1  TAAACTATCTTTGAGATTTGCATTTAAATGAATTCTAGAAATCTCAAATT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATCTTTGAGATTTGCATTTAAATGAATTCTAGAAATCTCAAATT  548

seq1  ACTGCCCACAAAGATTCATACAAGGTATAAATATTTCAATGTAGTTTTAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCACAAAGATTCATACAAGGTATAAATATTTCAATGTAGTTTTAG  598

seq1  ATGTTTGTACTATGATACATTTATAAAGAATAATATTATTTTAAAATCAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTACTATGATACATTTATAAAGAATAATATTATTTTAAAATCAT  648

seq1  CAGGTTTTCTGTACACACTAAAATTGTAACATGAATATAATAATCCATTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTCTGTACACACTAAAATTGTAACATGAATATAATAATCCATTT  698

seq1  AAAAATAATGTATTATTTACTTTTTGAGAATTATAGATGTTTAAAAAAAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGTATTATTTACTTTTTGAGAATTATAGATGTTTAAAAAAAT  748

seq1  AACTTGTGTTATTAAGTAGACTATAATTACATTGTTTTCTTCTCTTTTCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTGTTATTAAGTAGACTATAATTACATTGTTTTCTTCTCTTTTCT  798

seq1  CCCTCCAAACTCTTCCAAATATTCCTCCTTACTCTCTTTCAAATTTGTAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAAACTCTTCCAAATATTCCTCCTTACTCTCTTTCAAATTTGTAA  848

seq1  CCTCACATTTCATTAATTACACACACACAGATGTATTTATATGCATATGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACATTTCATTAATTACACACACACAGATGTATTTATATGCATATGT  898

seq1  ATTTATATACTACATAGAACATACAAACATATATGTAATTCATATATACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATACTACATAGAACATACAAACATATATGTAATTCATATATACA  948

seq1  TATGTGTACATGTGGAGAGCCGGTACGTGCTGCGAGCAATTGCGTGGGTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTACATGTGGAGAGCCGGTACGTGCTGCGAGCAATTGCGTGGGTG  998

seq1  CCGCTAGTAATCTCTGAGGAGAGCCATGTGTGCCGCGAGCAATCGCCATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTAGTAATCTCTGAGGAGAGCCATGTGTGCCGCGAGCAATCGCCATT  1048

seq1  ATAAGATGGCGCGGGCCTCCGCTGTGCCTAACTAGTAAACAAGCCTTGTA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGGCGCGGGCCTCCGCTGTGCCTAACTAGTAAACAAGCCTTGTA  1098

seq1  CGCAGGTGCAAGAGTGAATTC  1111
      |||||||||||||||||||||
seq2  CGCAGGTGCAAGAGTGAATTC  1119