BAC Information

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BAC

Clone NameB6Ng01-148H07
Chromosome16 (Build37)
Map Location 72,763,140 - 72,883,899
singlet/doubletdoublet
Overlap geneRobo1
Upstream genenone
Downstream geneLOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148H07.bB6Ng01-148H07.g
ACCDH945062DH945063
length1,113742
definitionDH945062|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H07, 5' end.DH945063|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,882,778 - 72,883,899)(72,763,140 - 72,763,879)
sequence
gaattcaacacatacttgttacccaatttttcaaagaatctacattcaat
aaatcttatctggtgcaatactgctttattacacctatatatattgaaat
tagtatcctttatgccaacactttttgcatttgtttgcaggggaaaaaac
caagaagcaaactcgcatcatatacttcagttgtaaggtctctaatctga
aagtccaacatgagaaacgctttattacgtgagatttggggtacggccat
gacagtacaggtaaaaactcccacaagtcacagagtaaaactggtagcag
ttaaaatagaggcacgcagcatagtttatttgtcatatgcaaggggaaag
ctttccagcatcctatggtcgttaatatacattgtcaacttgacaggatc
gagtatcatctaggagaactgtctctgggcaagcctctgaagatgacgat
tcagctctatggaaatgggccaacaatgtggggtcctaggataagaaaat
gcttgacagcaagcacccattgctctctgctccctggaaacagatgcatt
ttctctagctgcctcaacttctttataatgaaagactatgcttttcaatg
gagaccaaaatatctgctccgccccccccccaaaaaaattctttttctca
agtattctcttgtaaaaagggaaaagcaaccaagtttcccttggttctcc
tatatctttttgcacatgctccgattctccacctaagcacacacccaaag
ggttagacacaggagtatgcagactgtgtgcaccaaggactccactgttt
tattattattattacttgtttgctctattcttctcttggaaataaatact
ctatgttgcttgtattgtttggcagtttatgaatgtgctctgatgattct
actgtgctgcgggcctgctgaccttggttacatattatattatattcaca
catgtattattctttctgttagtgattacgaatgacataaaatggttgta
gatagtataatattgaccattaatactctatttccaattaagtgttcgct
tgggtgactggagacagtgacacatttgtttaatattgtccatatgcaaa
tgttccatgcaca
gaattcccgatttggaaaataagccagttagttctataggaacaataatc
ttaacgactgctcaacacttcctggcacagaagaattctcagctgcgttt
gacagatgaatgtgctgagttaaactctcagaattgagtttgtggggact
tttgggagaccctgatgatgtgcctgaacctacatgacatcatttgatta
cacatgctagagtgattactacctcgtatagtaattgcataactgagcac
ctgttagcatacagcatgggcagaaatggccattgtacagataaagagtc
atagttatgaacctcagtgggagagaatatgcgcagccctgctgggacta
gatgtagtccccaagggggacttccccttctctgaggagaggggaggagg
taccaggggggggatgacttgcaagggtgggagatgaaggatcagaggga
gggggtgctctgatctggatgcagagtgaataaataaataattgagagag
agagagagaaagaaaaaaagaaggcagtcattgattcccttagaattttt
gattttatttttgttgttgttgttgttgttgtttggaagctgtacaaact
taattcttgaaagtcagggtgtggctttatttataacataagtgcaaaag
gaaagaaggatgggcaagaagagaggtttatatttgatttgctctgacct
gtctatggctttttctgctccattgggctattccttgaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72882778_72883899
seq2: B6Ng01-148H07.b_47_1159 (reverse)

seq1  TGTGCAT-GAACATTTTTGCATATGGGACATTATAAAACAAATGTGTCAC  49
      ||||||| |||||  ||||||||| ||||| ||| |||||||||||||||
seq2  TGTGCATGGAACA--TTTGCATAT-GGACAATATTAAACAAATGTGTCAC  47

seq1  TGTCT-CAGTCACCCAAGCGAACACTATATTGGAAATAGAGTATTTATTG  98
      ||||| ||||||||||||||||||||  ||||||||||||||||| ||  
seq2  TGTCTCCAGTCACCCAAGCGAACACTTAATTGGAAATAGAGTATTAAT--  95

seq1  GTTCAATATTTATTACTATCTTACAACCATTTTATGTTCATTCGTAATCA  148
      | ||||||||   ||||||| ||||||||||||||| |||||||||||||
seq2  GGTCAATATT--ATACTATC-TACAACCATTTTATG-TCATTCGTAATCA  141

seq1  CTAACAGAAAAGAATAATACATGTGTGAATATAATATAATATTGTAACCA  198
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  CTAACAG-AAAGAATAATACATGTGTGAATATAATATAATA-TGTAACCA  189

seq1  AGGTCAGCAGGCCCGCAGCACAGTAGAATCATCAGAGCACATTCATAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCAGGCCCGCAGCACAGTAGAATCATCAGAGCACATTCATAAAC  239

seq1  TGCCAAACAATACAAGCAACATAGAGTATTTATTTCCAAGAGAAGAATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAACAATACAAGCAACATAGAGTATTTATTTCCAAGAGAAGAATAG  289

seq1  AGCAAACAAGTAATAATAATAATAAAACAGTGGAGTCCTTGGTGCACACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAAGTAATAATAATAATAAAACAGTGGAGTCCTTGGTGCACACA  339

seq1  GTCTGCATACTCCTGTGTCTAACCCTTTGGGTGTGTGCTTAGGTGGAGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCATACTCCTGTGTCTAACCCTTTGGGTGTGTGCTTAGGTGGAGAA  389

seq1  TCGGAGCATGTGCAAAAAGATATAGGAGAACCAAGGGAAACTTGGTTGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCATGTGCAAAAAGATATAGGAGAACCAAGGGAAACTTGGTTGCT  439

seq1  TTTCCCTTTTTACAAGAGAATACTTGAGAAAAAGAATTTTTTTGGGGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTTTACAAGAGAATACTTGAGAAAAAGAATTTTTTTGGGGGGG  489

seq1  GGGCGGAGCAGATATTTTGGTCTCCATTGAAAAGCATAGTCTTTCATTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGAGCAGATATTTTGGTCTCCATTGAAAAGCATAGTCTTTCATTAT  539

seq1  AAAGAAGTTGAGGCAGCTAGAGAAAATGCATCTGTTTCCAGGGAGCAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTTGAGGCAGCTAGAGAAAATGCATCTGTTTCCAGGGAGCAGAG  589

seq1  AGCAATGGGTGCTTGCTGTCAAGCATTTTCTTATCCTAGGACCCCACATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGGGTGCTTGCTGTCAAGCATTTTCTTATCCTAGGACCCCACATT  639

seq1  GTTGGCCCATTTCCATAGAGCTGAATCGTCATCTTCAGAGGCTTGCCCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCCATTTCCATAGAGCTGAATCGTCATCTTCAGAGGCTTGCCCAG  689

seq1  AGACAGTTCTCCTAGATGATACTCGATCCTGTCAAGTTGACAATGTATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTCTCCTAGATGATACTCGATCCTGTCAAGTTGACAATGTATAT  739

seq1  TAACGACCATAGGATGCTGGAAAGCTTTCCCCTTGCATATGACAAATAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGACCATAGGATGCTGGAAAGCTTTCCCCTTGCATATGACAAATAAA  789

seq1  CTATGCTGCGTGCCTCTATTTTAACTGCTACCAGTTTTACTCTGTGACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGCGTGCCTCTATTTTAACTGCTACCAGTTTTACTCTGTGACTT  839

seq1  GTGGGAGTTTTTACCTGTACTGTCATGGCCGTACCCCAAATCTCACGTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGTTTTTACCTGTACTGTCATGGCCGTACCCCAAATCTCACGTAA  889

seq1  TAAAGCGTTTCTCATGTTGGACTTTCAGATTAGAGACCTTACAACTGAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCGTTTCTCATGTTGGACTTTCAGATTAGAGACCTTACAACTGAAG  939

seq1  TATATGATGCGAGTTTGCTTCTTGGTTTTTTCCCCTGCAAACAAATGCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATGCGAGTTTGCTTCTTGGTTTTTTCCCCTGCAAACAAATGCAA  989

seq1  AAAGTGTTGGCATAAAGGATACTAATTTCAATATATATAGGTGTAATAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTGGCATAAAGGATACTAATTTCAATATATATAGGTGTAATAAA  1039

seq1  GCAGTATTGCACCAGATAAGATTTATTGAATGTAGATTCTTTGAAAAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATTGCACCAGATAAGATTTATTGAATGTAGATTCTTTGAAAAATT  1089

seq1  GGGTAACAAGTATGTGTTGAATTC  1122
      ||||||||||||||||||||||||
seq2  GGGTAACAAGTATGTGTTGAATTC  1113

seq1: chr16_72763140_72763879
seq2: B6Ng01-148H07.g_67_808

seq1  GAATTCCCGATTTGGAAAATAAGCCAGTTAGTTCTATAGGAACAATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGATTTGGAAAATAAGCCAGTTAGTTCTATAGGAACAATAATC  50

seq1  TTAACGACTGCTCAACACTTCCTGGCACAGAAGAATTCTCAGCTGCGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGACTGCTCAACACTTCCTGGCACAGAAGAATTCTCAGCTGCGTTT  100

seq1  GACAGATGAATGTGCTGAGTTAAACTCTCAGAATTGAGTTTGTGGGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGAATGTGCTGAGTTAAACTCTCAGAATTGAGTTTGTGGGGACT  150

seq1  TTTGGGAGACCCTGATGATGTGCCTGAACCTACATGACATCATTTGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGACCCTGATGATGTGCCTGAACCTACATGACATCATTTGATTA  200

seq1  CACATGCTAGAGTGATTACTACCTCGTATAGTAATTGCATAACTGAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTAGAGTGATTACTACCTCGTATAGTAATTGCATAACTGAGCAC  250

seq1  CTGTTAGCATACAGCATGGGCAGAAATGGCCATTGTACAGATAAAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCATACAGCATGGGCAGAAATGGCCATTGTACAGATAAAGAGTC  300

seq1  ATAGTTATGAACCTCAGTGGGAGAGAATATGCGCAGCCCTGCTGGGACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTATGAACCTCAGTGGGAGAGAATATGCGCAGCCCTGCTGGGACTA  350

seq1  GATGTAGTCCCCAAGGGGGACTTCCCCTTCTCTGAGGAGAGGGGAGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGTCCCCAAGGGGGACTTCCCCTTCTCTGAGGAGAGGGGAGGAGG  400

seq1  TACCAGGGGGGGGATGACTTGCAAGGGTGGGAGATGAAGGATCAGAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGGGGGGGATGACTTGCAAGGGTGGGAGATGAAGGATCAGAGGGA  450

seq1  GGGGGTGCTCTGATCTGGATGCAGAGTGAATAAATAAATAATTGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGCTCTGATCTGGATGCAGAGTGAATAAATAAATAATTGAGAGAG  500

seq1  AGAGAGAGAAAGAAAAAAAGAAGGCAGTCATTGATTCCCTTAGAATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAAGAAAAAAAGAAGGCAGTCATTGATTCCCTTAGAATTTTT  550

seq1  GATTTTATTTTTGTTGTTGTTGTTGTTGTTGTTTGGAAGCTGTACAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATTTTTGTTGTTGTTGTTGTTGTTGTTTGGAAGCTGTACAAACT  600

seq1  TAATTCTTGAAAGTCAGGGTGTGGCTTTA-TTATAACATAAGTGC-AAAG  648
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TAATTCTTGAAAGTCAGGGTGTGGCTTTATTTATAACATAAGTGCAAAAG  650

seq1  GAAAGAAGGATGGGCAAGAAGAGAGGTTTATATTTGATTTGCTCTGACCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGATGGGCAAGAAGAGAGGTTTATATTTGATTTGCTCTGACCT  700

seq1  GTCTATGGC-TTTTCGGCTCCAATTGGGCTATTCCTTGAATTT  740
      ||||||||| ||||| ||||| |||||||||||||||||| ||
seq2  GTCTATGGCTTTTTCTGCTCC-ATTGGGCTATTCCTTGAAATT  742