BAC Information

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BAC

Clone NameB6Ng01-148N23
Chromosome16 (Build37)
Map Location 86,899,953 - 87,044,823
singlet/doubletdoublet
Overlap genenone
Upstream geneAdamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148N23.bB6Ng01-148N23.g
ACCDH945363DH945364
length1,1181,117
definitionDH945363|Mus musculus domesticus DNA, BAC clone: B6Ng01-148N23, 5' end.DH945364|Mus musculus domesticus DNA, BAC clone: B6Ng01-148N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,899,953 - 86,901,078)(87,043,710 - 87,044,823)
sequence
gaattcatgtctggtactgcaaacaggttaaaacccccatgactagggca
gtcataagcccaaggggatagcctatcgatgttatgtttctagctcatgt
tatcatactaccttctgaatattcttttttttttttttctaaatagattt
gtgctgctcccaacttaggtcagttaaacctcttcttgcagtggttaatt
cagaaacatcttactgctcaatgtgctgagagggctcagccataaatagg
acatcttgatttctaatgtcctcagtgatttgagtcctagtaacatgact
gcggatggtgaaagagtaaagaaagaacagacatacaaacacacatgtgg
aaaagctgggacaggtcttttgtacaatgctctgatggagccttggctac
tatacaattacctggaacctcagcaatttattatatataacacagagaga
agagttagctagactcattaggagatctccttaaggtcaacagtctcagg
ctgtaaacatccaacaggaaaaactgcagttgctaccttttgcatacact
gctcaattgtttgtaaacacccatacttgctctgtcaatattcacactca
aaccatagaggtagactttgcagtctctgaaataccccattgtgactgtt
gctcaatccccatgggtgagatattggttcttgacacaggcatgcccatg
acaacaatatccattcacacagaactttatctactctttgcatattctct
ctaggcttcctctgctcttcgggaagacatcggaggacgtaaatgctacc
cttgacatggcatggatgttacatacatgaactcacccatagaaaacatg
catgggattaaaccagttaaattttttacatggaggagaaaggggttcct
gtggcgccagcattgctgaggatattgacagttgatgcttattaagtaga
gaatcatttatatgcaagagtatggccactggtcaggtcacaatgctcca
gtagtgaccccacacttgtgagcatattcagcatgctgtgactgaggggt
taatgaaaatatttattaaagaaaaactgagttgttagagatatttggta
atggaaatccttgggaga
gaattcttcatgtacatggaggaaattgagggacagtgatgcttaggagc
ccccaaaattgcatatttttataaccttttcatagccatctcttcttttt
agatttaatatttgaaagaaaggaaggattcttaccttaagtataatctg
atgtaatacaatttctctaaatttaatttaaagtatcctcatatttaacc
aagcacacagaggaagtcttagtttttaagctgtaacatccaagatgagg
acaggagagaaataattaattttagctattctatgtttgttaaaatatgt
tctctagatattcatacagctagaaaaaatttttaagttcagttaagcaa
cttaagtacatctgttcttccttgtactagttctaatttctacagttttt
atttgtattgctcttttctctccattggctattctgaatattttactgat
gagctcagaaatttccagtcacttatttaggatcaaacaccaaaagaata
ctgtctcttttaagtaaaaagtggactttctcatgggaaacatgcttcta
cctgagaggtacagtctcattttgtgtactttaccttctaaatgctacct
ttcatgctgtaatgaattcaagaggaaaccctgccctttcctctaaatga
ctcatgaggtaatgcctgacagattaacactaccacatgactaacagact
tctttcttgctggtaagtttctatgcatttcatcacatccactggaatgg
acacaccacaggcaacaaggatctttctaaacatggaatttatggaaagg
attgcttcaagattcagaaatctcattcaaataaagttatttaggttggg
gtataaataccagaattaatgatgctgtactctaatgctttagagataat
actacgtgtgggtagtgccaaaaattaggtcattaacatcattataaaag
tattcaaacatatatcaaagtaacaatgtctctattgaactatctgaata
gaaacagaagctacaactctgtttataaaaacacagctaccttgcagaac
atcattatttctgacatattctttttaaaaaaatgtttctattaatttgg
atacctctaatacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86899953_86901078
seq2: B6Ng01-148N23.b_47_1164

seq1  GAATTCATGTCTGGTACTGCAAACAGGTTAAAACCCCCATGACTAGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTGGTACTGCAAACAGGTTAAAACCCCCATGACTAGGGCA  50

seq1  GTCATAAGCCCAAGGGGATAGCCTATCGATGTTATGTTTCTAGCTCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAGCCCAAGGGGATAGCCTATCGATGTTATGTTTCTAGCTCATGT  100

seq1  TATCATACTACCTTCTGAATATTCTTTTTTTTTTTTTTCTAAATAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATACTACCTTCTGAATATTCTTTTTTTTTTTTTTCTAAATAGATTT  150

seq1  GTGCTGCTCCCAACTTAGGTCAGTTAAACCTCTTCTTGCAGTGGTTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCTCCCAACTTAGGTCAGTTAAACCTCTTCTTGCAGTGGTTAATT  200

seq1  CAGAAACATCTTACTGCTCAATGTGCTGAGAGGGCTCAGCCATAAATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACATCTTACTGCTCAATGTGCTGAGAGGGCTCAGCCATAAATAGG  250

seq1  ACATCTTGATTTCTAATGTCCTCAGTGATTTGAGTCCTAGTAACATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTGATTTCTAATGTCCTCAGTGATTTGAGTCCTAGTAACATGACT  300

seq1  GCGGATGGTGAAAGAGTAAAGAAAGAACAGACATACAAACACACATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATGGTGAAAGAGTAAAGAAAGAACAGACATACAAACACACATGTGG  350

seq1  AAAAGCTGGGACAGGTCTTTTGTACAATGCTCTGATGGAGCCTTGGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGGGACAGGTCTTTTGTACAATGCTCTGATGGAGCCTTGGCTAC  400

seq1  TATACAATTACCTGGAACCTCAGCAATTTATTATATATAACACAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATTACCTGGAACCTCAGCAATTTATTATATATAACACAGAGAGA  450

seq1  AGAGTTAGCTAGACTCATTAGGAGATCTCCTTAAGGTCAACAGTCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAGCTAGACTCATTAGGAGATCTCCTTAAGGTCAACAGTCTCAGG  500

seq1  CTGTAAACATCCAACAGGAAAAACTGCAGTTGCTACCTTTTGCATACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACATCCAACAGGAAAAACTGCAGTTGCTACCTTTTGCATACACT  550

seq1  GCTCAATTGTTTGTAAACACCCATACTTGCTCTGTCAATATTCACACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATTGTTTGTAAACACCCATACTTGCTCTGTCAATATTCACACTCA  600

seq1  AACCATAGAGGTAGACTTTGCAGTCTCTGAAATACCCCATTGTGACTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGAGGTAGACTTTGCAGTCTCTGAAATACCCCATTGTGACTGTT  650

seq1  GCTCAATCCCCATGGGTGAGATATTGGTTCTTGACACAGGCATGCCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATCCCCATGGGTGAGATATTGGTTCTTGACACAGGCATGCCCATG  700

seq1  ACAACAATATCCATTCACACAGAACTTTATCTACTCTTTGCATATTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATATCCATTCACACAGAACTTTATCTACTCTTTGCATATTCTCT  750

seq1  CTAGGCTTCCTCTGCTCTTCGGGAAGACATCGGAGGACGTAAATGCTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTTCCTCTGCTCTTCGGGAAGACATCGGAGGACGTAAATGCTACC  800

seq1  CTTGACATGGCATGGATGTTACATACATGAACTCACCCATAGAAAACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACATGGCATGGATGTTACATACATGAACTCACCCATAGAAAACATG  850

seq1  CATGGGATTAAACCAGTTAAATTTTTTACATGGAGGAGAAAGGGGTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGATTAAACCAGTTAAATTTTTTACATGGAGGAGAAAGGGGTTCCT  900

seq1  GTGGCGCCAGCATTTGCTGAGGAATTATTGACAGTTGATGCTTATTAAGT  950
      |||||||||||| ||||||||||  |||||||||||||||||||||||||
seq2  GTGGCGCCAGCA-TTGCTGAGGA--TATTGACAGTTGATGCTTATTAAGT  947

seq1  AGGAAGAATCATTTATATGCAAGAGTATGGCCACTGGTCAGTTCACAATG  1000
      ||  ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AG--AGAATCATTTATATGCAAGAGTATGGCCACTGGTCAGGTCACAATG  995

seq1  CTCCAGTAGTTGACCCCACAC-TGTGAGCATA-TCAGCAATGCTGTTGAA  1048
      ||||||||| ||||||||||| |||||||||| ||||| |||||||   |
seq2  CTCCAGTAG-TGACCCCACACTTGTGAGCATATTCAGC-ATGCTGT--GA  1041

seq1  CTTGAAGGGGTAAATGAAAAATATTTATAAAAGAAAGACATGAAGTTGTT  1098
      ||   |||||| |||| ||||||||||| ||||||| || || |||||||
seq2  CT--GAGGGGTTAATG-AAAATATTTATTAAAGAAAAAC-TG-AGTTGTT  1086

seq1  AGAGATATGTG--ATGGGAAATCCT--GGAGA  1126
      |||||||| ||  |  |||||||||  |||||
seq2  AGAGATATTTGGTAATGGAAATCCTTGGGAGA  1118

seq1: chr16_87043710_87044823
seq2: B6Ng01-148N23.g_66_1182 (reverse)

seq1  CAATGTA-TAGA-GTATACAAAATTAATAGAAACA-TTTTTTAAAAAG-A  46
      ||||||| |||| |||| | ||||||||||||||| |||||||||||| |
seq2  CAATGTATTAGAGGTAT-CCAAATTAATAGAAACATTTTTTTAAAAAGAA  49

seq1  TATGTCAGAATAATTGATGTTTCTGCAA-GTGGCTGTG-TTTTATAAACA  94
      ||||||||||  | ||||| |||||||| || |||||| |||||||||||
seq2  TATGTCAGAAATAATGATG-TTCTGCAAGGTAGCTGTGTTTTTATAAACA  98

seq1  GAGTTGTAGCTTCTGTTTTCTA-TCAGATAGTTC-ATAGAGACATTGTTT  142
      ||||||||||||||| |||||| ||||||||||| |||||||||||| ||
seq2  GAGTTGTAGCTTCTG-TTTCTATTCAGATAGTTCAATAGAGACATTG-TT  146

seq1  ACTTTGATATATGTTTTGAATACTTTTATAATGATGTTAATGACCTAAAT  192
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  ACTTTGATATATG-TTTGAATACTTTTATAATGATGTTAATGACCT-AAT  194

seq1  TTTTGGCACTACCCACACGTAGTATTATCTCTAAAGCATTAGAGTACAGC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCACTACCCACACGTAGTATTATCTCTAAAGCATTAGAGTACAGC  244

seq1  ATCATTAATTCTGGTATTTATACCCCAACCT-AATAACTTTATTTGAATG  291
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCATTAATTCTGGTATTTATACCCCAACCTAAATAACTTTATTTGAATG  294

seq1  AGATTTCTGAATCTTGAAGCAATCCTTTCCATAAATTCCATGTTTAGAAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTGAATCTTGAAGCAATCCTTTCCATAAATTCCATGTTTAGAAA  344

seq1  GATCCTTGTTGCCTGTGGTGTGTCCATTCCAGTGGATGTGATGAAATGCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGTTGCCTGTGGTGTGTCCATTCCAGTGGATGTGATGAAATGCA  394

seq1  TAGAAACTTACCAGCAAGAAAGAAGTCTGTTAGTCATGTGGTAGTGTTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTTACCAGCAAGAAAGAAGTCTGTTAGTCATGTGGTAGTGTTAA  444

seq1  TCTGTCAGGCATTACCTCATGAGTCATTTAGAGGAAAGGGCAGGGTTTCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGCATTACCTCATGAGTCATTTAGAGGAAAGGGCAGGGTTTCC  494

seq1  TCTTGAATTCATTACAGCATGAAAGGTAGCATTTAGAAGGTAAAGTACAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAATTCATTACAGCATGAAAGGTAGCATTTAGAAGGTAAAGTACAC  544

seq1  AAAATGAGACTGTACCTCTCAGGTAGAAGCATGTTTCCCATGAGAAAGTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGACTGTACCTCTCAGGTAGAAGCATGTTTCCCATGAGAAAGTC  594

seq1  CACTTTTTACTTAAAAGAGACAGTATTCTTTTGGTGTTTGATCCTAAATA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTACTTAAAAGAGACAGTATTCTTTTGGTGTTTGATCCTAAATA  644

seq1  AGTGACTGGAAATTTCTGAGCTCATCAGTAAAATATTCAGAATAGCCAAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGGAAATTTCTGAGCTCATCAGTAAAATATTCAGAATAGCCAAT  694

seq1  GGAGAGAAAAGAGCAATACAAATAAAAACTGTAGAAATTAGAACTAGTAC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAAAGAGCAATACAAATAAAAACTGTAGAAATTAGAACTAGTAC  744

seq1  AAGGAAGAACAGATGTACTTAAGTTGCTTAACTGAACTTAAAAATTTTTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAACAGATGTACTTAAGTTGCTTAACTGAACTTAAAAATTTTTT  794

seq1  CTAGCTGTATGAATATCTAGAGAACATATTTTAACAAACATAGAATAGCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGTATGAATATCTAGAGAACATATTTTAACAAACATAGAATAGCT  844

seq1  AAAATTAATTATTTCTCTCCTGTCCTCATCTTGGATGTTACAGCTTAAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATTATTTCTCTCCTGTCCTCATCTTGGATGTTACAGCTTAAAA  894

seq1  ACTAAGACTTCCTCTGTGTGCTTGGTTAAATATGAGGATACTTTAAATTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACTTCCTCTGTGTGCTTGGTTAAATATGAGGATACTTTAAATTA  944

seq1  AATTTAGAGAAATTGTATTACATCAGATTATACTTAAGGTAAGAATCCTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAGAAATTGTATTACATCAGATTATACTTAAGGTAAGAATCCTT  994

seq1  CCTTTCTTTCAAATATTAAATCTAAAAAGAAGAGATGGCTATGAAAAGGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTCAAATATTAAATCTAAAAAGAAGAGATGGCTATGAAAAGGT  1044

seq1  TATAAAAATATGCAATTTTGGGGGCTCCTAAGCATCACTGTCCCTCAATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATATGCAATTTTGGGGGCTCCTAAGCATCACTGTCCCTCAATT  1094

seq1  TCCTCCATGTACATGAAGAATTC  1114
      |||||||||||||||||||||||
seq2  TCCTCCATGTACATGAAGAATTC  1117