BAC Information

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BAC

Clone NameB6Ng01-149I18
Chromosome16 (Build37)
Map Location 68,664,906 - 68,710,492
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626609
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149I18.bB6Ng01-149I18.g
ACCDH945859DH945860
length6371,169
definitionDH945859|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I18, 5' end.DH945860|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,664,906 - 68,665,540)(68,709,311 - 68,710,492)
sequence
gaattcttcagtttcccgtgacacctaaagctgcacagtaatgttgatgc
aatgatgtggtaaatataaccagtactaatatacattactgctttgttct
gttgttttgttttgttttgttttgttttgttttgttttgttttgttttgt
tttgtttgtttgtttgtttttcctctcagaatataattttgaaaaagaaa
gaggaggggggggaggaatgaatgaagaaaaacataaatagctattgttg
aagtccgacttgatcaggccaaagaagagatcaaagcaaatgtacttttt
tgcacgtaattttaatgtagtgtcctcttcctcctcttgttcttagcttg
tacttttccatttctttgtccttggtgaaagtctttgggcaggaaatgta
ttttcgctgctagctcttagcacattagtgtgaagcattttgcctggttg
tccctgctcccagaatcctcaccttgtgtggggaacctgcgatattcatt
tagagtcagtaatggggctccatgtgttgtgaacaccacagtactacctt
tatgcactaattaattgaatatggtaatgagggcatggctacaaagtcaa
agttaggagaaactgaaaaatagggtaattttatcta
gaattcttatggctttgttagaggtggactttaaggtctcatatgctcaa
gacaggcccagtgccacactgccttcctgctgcctgccgatcctgattgt
agaactctcagctgcctctccaataccatgtctgctggctgttgccatgc
tcactgccataatgacaatggactagacatttgaactgtaatccagaagt
aaccagatgctttcctttataagagttgatgtgggctgggcagtggtggt
atatgcctttaatcccagcacttgggaggcagaggcaggcaaatttctga
gttcacgaccagcctggtctacagagcgagttccaggacagccagggcta
cacagagaaaccctatctcggaaaaaaaaaaaaaacaaaaaacaaaaaac
aaaaaacaaacaaaaaaagttgatgtgatcatggagatgcttcacagcaa
tagaaaccctacctacaataaatatggaactaattctttttttttttttt
cgtgtgaaatttcttttcctttttttttattagatattatctttatatac
atttcaaatgctatcccgaaagttccctgtaccctcccccctagatttct
aagaactaatattgttttaagctactacattgaaaaagtaagttttttgc
ttaattttggagatattcaaaagttttaaaaacagagtacataaatctat
tttaatctttttagctgtttttttccatttcctgtttttaagacagggta
taattgtgtgggctgaataggttcaaactggaaatgcttatgcagctaac
cttaaattctagtattacctgcatcaccaccatgactggctcacagacat
caactcacatcttgctaaaagctatcatatcaaatattcttctggaagga
aagatttcaaatgggtgaaaaatcatcaattttttagaagaaaaaaatat
tttatttaaaggtataaaactataagggccatgttttttttctaatcatg
gttgggataaaagttttctatcattaggaaatacccacaagggagaaaaa
ctgcattatcaagaattacgtaagtgtgagtaagacttgctaagagtggg
ttaaataatgtcctcaaaataagaataataataagaaattgccactgcta
actatgtcaacattgtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68664906_68665540
seq2: B6Ng01-149I18.b_45_681

seq1  GAATTCTTCAGTTTCCCGTGACACCTAAAGCTGCACAGTAATGTTGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTTTCCCGTGACACCTAAAGCTGCACAGTAATGTTGATGC  50

seq1  AATGATGTGGTAAATATAACCAGTACTAATATACATTACTGCTTTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTGGTAAATATAACCAGTACTAATATACATTACTGCTTTGTTCT  100

seq1  GTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  150

seq1  TTTGTTTGTTTGTTTGTTTTTCCTCTCAGAATATAATTTTGAAAAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTTTCCTCTCAGAATATAATTTTGAAAAAGAAA  200

seq1  GAGGAGGGGGGGGAGGAATGAATGAAGAAAAACATAAATAGCTATTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGGGGGGAGGAATGAATGAAGAAAAACATAAATAGCTATTGTTG  250

seq1  AAGTCCGACTTGATCAGGCCAAAGAAGAGATCAAAGCAAATGTACTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCGACTTGATCAGGCCAAAGAAGAGATCAAAGCAAATGTACTTTTT  300

seq1  TGCACGTAATTTTAATGTAGTGTCCTCTTCCTCCTCTTGTTCTTAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGTAATTTTAATGTAGTGTCCTCTTCCTCCTCTTGTTCTTAGCTTG  350

seq1  TACTTTTCCATTTCTTTGTCCTTGGTGAAAGTCTTTGGGCAGGAAATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCCATTTCTTTGTCCTTGGTGAAAGTCTTTGGGCAGGAAATGTA  400

seq1  TTTTCGCTGCTAGCTCTTAGCACATTAGTGTGAAGCATTTTGCCTGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGCTGCTAGCTCTTAGCACATTAGTGTGAAGCATTTTGCCTGGTTG  450

seq1  TCCCTGCTCCCAGAATCCTCACCTTGTGTGGGGAACCTGCGATATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTCCCAGAATCCTCACCTTGTGTGGGGAACCTGCGATATTCATT  500

seq1  TAGAGTCAGTAATGGGGCTCCATGTGTTGTGAACACCACAGTACTACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCAGTAATGGGGCTCCATGTGTTGTGAACACCACAGTACTACCTT  550

seq1  TATGCACTAATTAATTGAATATGGTAATGAGGGCATGGCTACAAAGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTAATTAATTGAATATGGTAATGAGGGCATGGCTACAAAGTCAA  600

seq1  AG-TAGGAGAAACTGAAAAATAGGGTAA-TTTATCTA  635
      || ||||||||||||||||||||||||| ||||||||
seq2  AGTTAGGAGAAACTGAAAAATAGGGTAATTTTATCTA  637

seq1: chr16_68709311_68710492
seq2: B6Ng01-149I18.g_66_1234 (reverse)

seq1  TTTACATAATGTT-ACATAGTTTATGCAGTTTGGCTATTTCTTATTATTA  49
      |||||  |||||| ||||||||   ||||  |||| ||||||||||||||
seq2  TTTAC--AATGTTGACATAGTT--AGCAG--TGGCAATTTCTTATTATTA  44

seq1  TTTCTTTATTTTGAG--CATTATTTAACCCAACTCTTAAGCAAATGTCTT  97
      ||   ||||||||||  ||||||||||||| |||||| |||||  |||||
seq2  TT--CTTATTTTGAGGACATTATTTAACCC-ACTCTT-AGCAA--GTCTT  88

seq1  ACCTCACACTTACGTAATTCTTTGGATATTGCAATTTTTCTCCCTTGGTG  147
      | ||||||||||||||||||||  |||| |||| |||||||||||||  |
seq2  A-CTCACACTTACGTAATTCTT--GATAATGCAGTTTTTCTCCCTTGTGG  135

seq1  GTATTTCCTAATGAATAGAAAACTTTTATACCAAACTATGAATTAGAAAA  197
      ||||||||||||| ||||||||||||||| || ||| ||| |||||||||
seq2  GTATTTCCTAATG-ATAGAAAACTTTTAT-CCCAACCATG-ATTAGAAAA  182

seq1  AAAACCATGG-CCTTATAGTTTTAATACTTTAAAATAAAATATGTTTTTC  246
      |||| ||||| |||||||||||| |||| || ||||||||||| ||||||
seq2  AAAA-CATGGCCCTTATAGTTTT-ATACCTTTAAATAAAATATTTTTTTC  230

seq1  TTCTAAAAAATTGATGA-TTTTCACCCATTTGAAATC-TTCCTTCCAGAA  294
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  TTCTAAAAAATTGATGATTTTTCACCCATTTGAAATCTTTCCTTCCAGAA  280

seq1  GAATA-TTGATATGATAGCTTTTAGCAAGATGTGAGTTGATGTCTGTGAG  343
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTGATATGATAGCTTTTAGCAAGATGTGAGTTGATGTCTGTGAG  330

seq1  CCAGTCATGGTGGTGATGCAGGTAATACTAGAATTTAAGGTTAGCTGCAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCATGGTGGTGATGCAGGTAATACTAGAATTTAAGGTTAGCTGCAT  380

seq1  AAGCATTTCCAGTTTGAACCTATTCAGCCCACACAATTATACCCTGTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTCCAGTTTGAACCTATTCAGCCCACACAATTATACCCTGTCTT  430

seq1  AAAAACAGGAAATGGAAAAAAACAGCTAAAAAGATTAAAATAGATTTATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGGAAATGGAAAAAAACAGCTAAAAAGATTAAAATAGATTTATG  480

seq1  TACTCTGTTTTTAAAACTTTTGAATATCTCCAAAATTAAGCAAAAAACTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTTTTTAAAACTTTTGAATATCTCCAAAATTAAGCAAAAAACTT  530

seq1  ACTTTTTCAATGTAGTAGCTTAAAACAATATTAGTTCTTAGAAATCTAGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCAATGTAGTAGCTTAAAACAATATTAGTTCTTAGAAATCTAGG  580

seq1  GGGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGA  630

seq1  TAATATCTAATAAAAAAAAAGGAAAAGAAATTTCACACGAAAAAAAAAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTAATAAAAAAAAAGGAAAAGAAATTTCACACGAAAAAAAAAAA  680

seq1  AAAGAATTAGTTCCATATTTATTGTAGGTAGGGTTTCTATTGCTGTGAAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTAGTTCCATATTTATTGTAGGTAGGGTTTCTATTGCTGTGAAG  730

seq1  CATCTCCATGATCACATCAACTTTTTTTGTTTGTTTTTTGTTTTTTGTTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCATGATCACATCAACTTTTTTTGTTTGTTTTTTGTTTTTTGTTT  780

seq1  TTTGTTTTTTTTTTTTTTCCGAGATAGGGTTTCTCTGTGTAGCCCTGGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTTTTTTTTTCCGAGATAGGGTTTCTCTGTGTAGCCCTGGCT  830

seq1  GTCCTGGAACTCGCTCTGTAGACCAGGCTGGTCGTGAACTCAGAAATTTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCGCTCTGTAGACCAGGCTGGTCGTGAACTCAGAAATTTG  880

seq1  CCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATATACCACCACTGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATATACCACCACTGC  930

seq1  CCAGCCCACATCAACTCTTATAAAGGAAAGCATCTGGTTACTTCTGGATT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCACATCAACTCTTATAAAGGAAAGCATCTGGTTACTTCTGGATT  980

seq1  ACAGTTCAAATGTCTAGTCCATTGTCATTATGGCAGTGAGCATGGCAACA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCAAATGTCTAGTCCATTGTCATTATGGCAGTGAGCATGGCAACA  1030

seq1  GCCAGCAGACATGGTATTGGAGAGGCAGCTGAGAGTTCTACAATCAGGAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGACATGGTATTGGAGAGGCAGCTGAGAGTTCTACAATCAGGAT  1080

seq1  CGGCAGGCAGCAGGAAGGCAGTGTGGCACTGGGCCTGTCTTGAGCATATG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGGCAGCAGGAAGGCAGTGTGGCACTGGGCCTGTCTTGAGCATATG  1130

seq1  AGACCTTAAAGTCCACCTCTAACAAAGCCATAAGAATTC  1182
      |||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTAAAGTCCACCTCTAACAAAGCCATAAGAATTC  1169