BAC Information

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BAC

Clone NameB6Ng01-150G21
Chromosome16 (Build37)
Map Location 35,381,604 - 35,550,268
singlet/doubletdoublet
Overlap genePdia5, Sema5b
Upstream geneKalrn, Ropn1, Ccdc14, Mylk, Ptplb, Adcy5, Sec22a
Downstream geneEG546663, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150G21.bB6Ng01-150G21.g
ACCDH946511DH946512
length1,132794
definitionDH946511|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G21, 5' end.DH946512|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,549,129 - 35,550,268)(35,381,604 - 35,382,397)
sequence
gaattcaagagcctattattgctataggaaatcagtcagaaatggtctta
atggaccatgttaaaaagaagcataaagattccactccaggaaatctttt
cggaggaaatactcatcaatagcacaaagatttatgtgtgaggatgctcg
ctgcagcgttatttataatggtgaaaaatggcttacagtctacatgtcca
accgcagagcgtttgctaaataaattatagtgcatccgaatgatggaata
caggcatccattaagaagtccattttataaaaacacttaagacatgggaa
aattatcacaatatgttaagtgaaaagagctgatgcaaaatagtgcagac
gtctgagcacgactggctacatacctctctgcaaggaaatatgccaacct
ggtgaataaatgcatcgtttttataaacactttttaaagaacaaatgccc
ccaaaattatattaggaagagctcccataatcagtttgtaataaaaggtc
atgaaattcagaatacaggaacatcagcagcggttatgatctgaaggccg
gagctggtactggtggaaagggagcagaccatttggaagagagctgagag
atgctgtatgccattggcatgaggccagggggaatctaggaaagatttag
gtcagtggctcccaaccagggctgcatatgacacacacacacacacacac
acacacacacacacacacacacacacacaggctctatcttcaggaattct
aactcagttgaagtctaggataggacagttgtgtgtaattatcatattca
aatacatggtcaaatgcatatagtattcaggtttctgttttgttttgggg
gacatatagccttggtctgtctgtaatcggttatgtaaatgggtggcagg
ctacccttgagctcagagatccacctgcttcttccttcctcatgttgggg
ttaaaggcatgtgctaccatgccctatatattttactttaccatgtgtat
gtatgtttgtgagtgtaagcataatatgctcttgcatgtacgagaggtca
aaggacatttttcagagctgctgcctcaggtctacacagcatagcatact
cccagctagctgtccatgaactcaagtggttt
gaattccagatttcattcatttgccacttctatttgtggcattggctcat
ccatttcttgttcttgatgatcttgattttttttttgaagcagggtctta
ctatgtggtcctacccagcctagaatttgctctttagaccagactagcct
cagactcacagagatctgcctacagagtgctgggattaaggcgtgagcca
ctgctctcgacgtagtcttgatacatctgaaaagtactggtaactcactt
tgtaagtttgaggtttcagtggtttcctatggttctatagatgttgtaca
tctggggaaaagtaaagaatactgttttatattcttggtgcatccaacac
agagaaggaacatgatgtcaaggtatttgagctatctatagctatacatg
cttttaatgccagcactctggatgcaagggtttacctatctctgtgagtt
caagtctacatattgagatccagtctagctaggactatatatgagagaga
ccgtgtctcaaaaaatatttattactttcaaaatggataccttgggaagt
cattctgtttgggctctgtcctaatatcagaggggagcacagggctctgc
ccaatgatatataggccctttctacaacattgaaaatgaaactgagttct
gagtctgtgtctgtatactcctctgatttccaagggtctgtgggcaatga
ctaaggagacaagatatgcaggaagcattccaagaaggaggagaagagga
aggggaagagaaagaggaggaggaagaaagaaggaggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35549129_35550268
seq2: B6Ng01-150G21.b_46_1177 (reverse)

seq1  AAACCACCTGGAAGTTCATGGGCCAGCTAGCTTGGAGTATGCTATGCTGT  50
      ||||||| ||  ||||||| || ||||||||| |||||||||||||||||
seq2  AAACCACTTG--AGTTCAT-GGACAGCTAGCTGGGAGTATGCTATGCTGT  47

seq1  GGTAGACACTGA-GCAGCAGCTCCTGAAAATTGTCCTCTGACCTCTGCGT  99
       |||||| |||| ||||||||| ||||||| |||||| |||||||| |||
seq2  -GTAGAC-CTGAGGCAGCAGCT-CTGAAAAATGTCCTTTGACCTCT-CGT  93

seq1  ACATGCAAGAGCATATTAATGCCTACACTCACATACATACATACACATGG  149
      ||||||||||||||||| |||| |||||||||| ||||||||||||||||
seq2  ACATGCAAGAGCATATT-ATGCTTACACTCACAAACATACATACACATGG  142

seq1  TAAAGTAAAATATATAAGGGCATGGTAGCACATGCCTTTAACCCCAACAT  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAAAGTAAAATATAT-AGGGCATGGTAGCACATGCCTTTAACCCCAACAT  191

seq1  GAGGAAGGCAGAAGCAGGTGGATCTCTGAGCTCAAGGGTAGCCTGCCACC  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAAGAAGCAGGTGGATCTCTGAGCTCAAGGGTAGCCTGCCACC  241

seq1  CATTTACATAACCGATTACAGACAGACCAAGGCTATATGTCCCCCAAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATAACCGATTACAGACAGACCAAGGCTATATGTCCCCCAAAAC  291

seq1  AAAACAGAAACCTGAATACTATATGCATTTGACCATGTATTTGAATATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAACCTGAATACTATATGCATTTGACCATGTATTTGAATATGA  341

seq1  TAATTACACACAACTGTCCTATCCTAGACTTCAACTGAGTTAGAATTCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACACACAACTGTCCTATCCTAGACTTCAACTGAGTTAGAATTCCT  391

seq1  GAAGATAGAGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGAGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  441

seq1  TGTGTGTGTGTCATATGCAGCCCTGGTTGGGAGCCACTGACCTAAATCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTCATATGCAGCCCTGGTTGGGAGCCACTGACCTAAATCTT  491

seq1  TCCTAGATTCCCCCTGGCCTCATGCCAATGGCATACAGCATCTCTCAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATTCCCCCTGGCCTCATGCCAATGGCATACAGCATCTCTCAGCT  541

seq1  CTCTTCCAAATGGTCTGCTCCCTTTCCACCAGTACCAGCTCCGGCCTTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCAAATGGTCTGCTCCCTTTCCACCAGTACCAGCTCCGGCCTTCA  591

seq1  GATCATAACCGCTGCTGATGTTCCTGTATTCTGAATTTCATGACCTTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAACCGCTGCTGATGTTCCTGTATTCTGAATTTCATGACCTTTTA  641

seq1  TTACAAACTGATTATGGGAGCTCTTCCTAATATAATTTTGGGGGCATTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACTGATTATGGGAGCTCTTCCTAATATAATTTTGGGGGCATTTG  691

seq1  TTCTTTAAAAAGTGTTTATAAAAACGATGCATTTATTCACCAGGTTGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAAAAGTGTTTATAAAAACGATGCATTTATTCACCAGGTTGGCA  741

seq1  TATTTCCTTGCAGAGAGGTATGTAGCCAGTCGTGCTCAGACGTCTGCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTTGCAGAGAGGTATGTAGCCAGTCGTGCTCAGACGTCTGCACT  791

seq1  ATTTTGCATCAGCTCTTTTCACTTAACATATTGTGATAATTTTCCCATGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATCAGCTCTTTTCACTTAACATATTGTGATAATTTTCCCATGT  841

seq1  CTTAAGTGTTTTTATAAAATGGACTTCTTAATGGATGCCTGTATTCCATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTGTTTTTATAAAATGGACTTCTTAATGGATGCCTGTATTCCATC  891

seq1  ATTCGGATGCACTATAATTTATTTAGCAAACGCTCTGCGGTTGGACATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGATGCACTATAATTTATTTAGCAAACGCTCTGCGGTTGGACATGT  941

seq1  AGACTGTAAGCCATTTTTCACCATTATAAATAACGCTGCAGCGAGCATCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAAGCCATTTTTCACCATTATAAATAACGCTGCAGCGAGCATCC  991

seq1  TCACACATAAATCTTTGTGCTATTGATGAGTATTTCCTCCGAAAAGATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATAAATCTTTGTGCTATTGATGAGTATTTCCTCCGAAAAGATTT  1041

seq1  CCTGGAGTGGAATCTTTATGCTTCTTTTTAACATGGTCCATTAAGACCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTGGAATCTTTATGCTTCTTTTTAACATGGTCCATTAAGACCAT  1091

seq1  TTCTGACTGATTTCCTATAGCAATAATAGGCTCTTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGATTTCCTATAGCAATAATAGGCTCTTGAATTC  1132

seq1: chr16_35381604_35382397
seq2: B6Ng01-150G21.g_64_857

seq1  GAATTCCAGATTTCATTCATTTGCCACTTCTATTTGTGGCATTGGCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTTCATTCATTTGCCACTTCTATTTGTGGCATTGGCTCAT  50

seq1  CCATTTCTTGTTCTTGATGATCTTGATTTTTTTTTTGAAGCAGGGTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTTGTTCTTGATGATCTTGATTTTTTTTTTGAAGCAGGGTCTTA  100

seq1  CTATGTGGTCCTACCCAGCCTAGAATTTGCTCTTTAGACCAGACTAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGGTCCTACCCAGCCTAGAATTTGCTCTTTAGACCAGACTAGCCT  150

seq1  CAGACTCACAGAGATCTGCCTACAGAGTGCTGGGATTAAGGCGTGAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCACAGAGATCTGCCTACAGAGTGCTGGGATTAAGGCGTGAGCCA  200

seq1  CTGCTCTCGACGTAGTCTTGATACATCTGAAAAGTACTGGTAACTCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCGACGTAGTCTTGATACATCTGAAAAGTACTGGTAACTCACTT  250

seq1  TGTAAGTTTGAGGTTTCAGTGGTTTCCTATGGTTCTATAGATGTTGTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTTGAGGTTTCAGTGGTTTCCTATGGTTCTATAGATGTTGTACA  300

seq1  TCTGGGGAAAAGTAAAGAATACTGTTTTATATTCTTGGTGCATCCAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAAAAGTAAAGAATACTGTTTTATATTCTTGGTGCATCCAACAC  350

seq1  AGAGAAGGAACATGATGTCAAGGTATTTGAGCTATCTATAGCTATACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGAACATGATGTCAAGGTATTTGAGCTATCTATAGCTATACATG  400

seq1  CTTTTAATGCCAGCACTCTGGATGCAAGGGTTTACCTATCTCTGTGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATGCCAGCACTCTGGATGCAAGGGTTTACCTATCTCTGTGAGTT  450

seq1  CAAGTCTACATATTGAGATCCAGTCTAGCTAGGACTATATATGAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTACATATTGAGATCCAGTCTAGCTAGGACTATATATGAGAGAGA  500

seq1  CCGTGTCTCAAAAAATATTTATTACTTTCAAAATGGATACCTTGGGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTCTCAAAAAATATTTATTACTTTCAAAATGGATACCTTGGGAAGT  550

seq1  CATTCTGTTTGGGCTCTGTCCTAATATCAGAGGGGAGCACAGGGCTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTTTGGGCTCTGTCCTAATATCAGAGGGGAGCACAGGGCTCTGC  600

seq1  CCAATGATATATAGGCCCTTTCTACAACATTGAAAATGAAACTGAGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGATATATAGGCCCTTTCTACAACATTGAAAATGAAACTGAGTTCT  650

seq1  GAGTCTGTGTCTGTATACTCCTCTGATTTCCAAGGGTCTGTGGGCAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGTGTCTGTATACTCCTCTGATTTCCAAGGGTCTGTGGGCAATGA  700

seq1  CTAAGGAGACAAGATATGCAGGAAGCATTCCAAGAAGGAGGAGAAGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGACAAGATATGCAGGAAGCATTCCAAGAAGGAGGAGAAGAGGA  750

seq1  AGGGGAAGAGAAAGAGGAGGAGGAAGAAAGAAGGAGGAGGAGGA  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGAAAGAGGAGGAGGAAGAAAGAAGGAGGAGGAGGA  794