BAC Information

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BAC

Clone NameB6Ng01-151N21
Chromosome16 (Build37)
Map Location 47,486,804 - 47,487,948
singlet/doubletsinglet
Overlap genenone
Upstream genePvrl3, LOC628757
Downstream geneLOC628776, EG667741, EG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151N21.bB6Ng01-151N21.g
ACCDH947581DH947582
length1,1441,148
definitionDH947581|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N21, 5' end.DH947582|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattcactctgcaggaaggaactcacaccacgtactagaagc
caaaggattaaggagatcctaggtcctagtgggaggcaaattttttttag
aacttattaaatggataaaatatgactgctaaaatgctttttaaaatatt
ttatgctagacccctgtaatgctactgctatgggtctgtattgaaagaaa
acatgtttgttttttggttttgtttttttttcagtaaacactatttatta
caaaaaagtaactgatagtgtggtatctcagacatatagttattcataaa
cgaaagcaaataattagaaatcaacaacaacctgtccacaaggagaagta
atatatcagaacatgaggaagaagaatataattgctccagaaagggttgg
tgtgctttccccccaagttttaacattctttcctggagtgagaaggaaga
ctcataaaacttaggaaatactaagttcaggaaactgtagatggaagaca
tcctcaaggcccatctccatagtcagaaaaatagtatataattattagaa
gagaaactgcctataagttgggtaatggctcctactgatagaattttcat
gtaaagcataaactcaggtagccacacaagaaaaccaagagggtaagtca
atgacttctaaagtattttctaagaatcaagataaagctttaaaattccc
ataataataagtcactgatatattaataatcaataactattatgagtaat
aattaaatatttaatgagatgataaattagataactaaccactattttct
ctataaatttattttattatatatatcttacatgttttaattagtatgcc
atatgcatactacaatattatatatacaccatatttaataaaatagtcca
taatactacatatattataatataatatttatgacaattttgagagaatt
tatctttagtaaataaaatagatgtattctctatatattaaagttagcag
tttatgttttttatatatatgcataggtgaatgatactaatatcatgcca
ttgaagtatttaatccacttacagaggttaggtatttttttggaggtaaa
aggaaccagaaggtcgctgtttcaaaaattctagaatgcatcaa
gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaaag
gttcaacatccttaatcatcagggaaatgcaaatcaaagcaaccttgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcagttgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcggtctggcggttcctc
agaaaattggacatagtggatcctgcaatacctctccggggcacatatcc
agaagatgttccaaccggtaagaaggacacatgctccactatgttcatag
cagccttatttataatagccagaagctggaaagaacccagatacccctca
acagagggatggatacagaaaatgtggtacagttacacaatggagtacta
ctcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatgg
acctggagggcatcatcctgaatgaagtaacccaagcacaaaggaactca
cacaatatgtcctcactaataagttggtattagcccagaaccttaggata
cccaagatataagatacaatttgcaaaacacatgatactcaagaagaatg
aagaccaaaatgtggatactttgccccttcttagaattgggaacaaaaca
cccatggaaggcgttacagagacaaagtttggagctgtgacaaaaggatg
gaccatctagagactgccatatctgggaatccatcccataatcagcttcc
aaatgctgacaccattgtatacactagcaagattttgctgaaaggaccaa
gatagagctctcttttttgagactatgctggggcctagcacacacagaag
tggatgctcacagtcagctatggatggactacagcccccccatggaggag
ctagagaagtacccagagctaagggatctgcatcctataggtgggacaca
taagactaccagtactcacttggagctgtgtctctagctgcatatgatca
gaatgacctagtcagacatcatggaaggaaggtccaatcatcatgcaact
tatatgctcagtacagggcaacgacaggtcagaaatgtggatgtagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_47486804_47487948
seq2: B6Ng01-151N21.b_48_1191 (reverse)

seq1  TTGATTGCATTCTAAGAATTTTTTAAAACAGCGA-CTTCTTGGTGCTTTT  49
      |||| |||||||| |||| ||||| ||||||||| ||||| | | |||||
seq2  TTGA-TGCATTCT-AGAA-TTTTTGAAACAGCGACCTTCTGGTTCCTTTT  47

seq1  ACTTC--AAAAAATAACTAA-CTCTGTAAAGTGATT-AATACTTCAATGG  95
      || ||  |||||||| |||| ||||||||   |||| |||||||||||||
seq2  ACCTCCAAAAAAATACCTAACCTCTGTAAGTGGATTAAATACTTCAATGG  97

seq1  CATGATA-TAGTAATCATTTCACTATGCATATATAT-AAAAACATAAACT  143
      ||||||| |||| ||||||   |||||||||||||| |||||||||||||
seq2  CATGATATTAGT-ATCATTCACCTATGCATATATATAAAAAACATAAACT  146

seq1  GCTAACTTTAAATATATAAGAGAAAATACATCTATTTTATTTACTAAAGA  193
      ||||||||| |||||||   ||| ||||||||||||||||||||||||||
seq2  GCTAACTTT-AATATAT---AGAGAATACATCTATTTTATTTACTAAAGA  192

seq1  TAAATTCTCTCAAAATTGTCATAAATATTATATTATAATATATGTAGTAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTCTCAAAATTGTCATAAATATTATATTATAATATATGTAGTAT  242

seq1  TATGGACTATTTTATTAAATATGGTGTATATATAATATTGTAGTATGCAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACTATTTTATTAAATATGGTGTATATATAATATTGTAGTATGCAT  292

seq1  ATGGCATACTAATTAAAACATGTAAGATATATATAATAAAATAAATTTAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATACTAATTAAAACATGTAAGATATATATAATAAAATAAATTTAT  342

seq1  AGAGAAAATAGTGGTTAGTTATCTAATTTATCATCTCATTAAATATTTAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATAGTGGTTAGTTATCTAATTTATCATCTCATTAAATATTTAA  392

seq1  TTATTACTCATAATAGTTATTGATTATTAATATATCAGTGACTTATTATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTCATAATAGTTATTGATTATTAATATATCAGTGACTTATTATT  442

seq1  ATGGGAATTTTAAAGCTTTATCTTGATTCTTAGAAAATACTTTAGAAGTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAATTTTAAAGCTTTATCTTGATTCTTAGAAAATACTTTAGAAGTC  492

seq1  ATTGACTTACCCTCTTGGTTTTCTTGTGTGGCTACCTGAGTTTATGCTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTTACCCTCTTGGTTTTCTTGTGTGGCTACCTGAGTTTATGCTTT  542

seq1  ACATGAAAATTCTATCAGTAGGAGCCATTACCCAACTTATAGGCAGTTTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAATTCTATCAGTAGGAGCCATTACCCAACTTATAGGCAGTTTC  592

seq1  TCTTCTAATAATTATATACTATTTTTCTGACTATGGAGATGGGCCTTGAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAATAATTATATACTATTTTTCTGACTATGGAGATGGGCCTTGAG  642

seq1  GATGTCTTCCATCTACAGTTTCCTGAACTTAGTATTTCCTAAGTTTTATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTCCATCTACAGTTTCCTGAACTTAGTATTTCCTAAGTTTTATG  692

seq1  AGTCTTCCTTCTCACTCCAGGAAAGAATGTTAAAACTTGGGGGGAAAGCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCTTCTCACTCCAGGAAAGAATGTTAAAACTTGGGGGGAAAGCA  742

seq1  CACCAACCCTTTCTGGAGCAATTATATTCTTCTTCCTCATGTTCTGATAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCCTTTCTGGAGCAATTATATTCTTCTTCCTCATGTTCTGATAT  792

seq1  ATTACTTCTCCTTGTGGACAGGTTGTTGTTGATTTCTAATTATTTGCTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCTCCTTGTGGACAGGTTGTTGTTGATTTCTAATTATTTGCTTT  842

seq1  CGTTTATGAATAACTATATGTCTGAGATACCACACTATCAGTTACTTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTATGAATAACTATATGTCTGAGATACCACACTATCAGTTACTTTTT  892

seq1  TGTAATAAATAGTGTTTACTGAAAAAAAAACAAAACCAAAAAACAAACAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAATAGTGTTTACTGAAAAAAAAACAAAACCAAAAAACAAACAT  942

seq1  GTTTTCTTTCAATACAGACCCATAGCAGTAGCATTACAGGGGTCTAGCAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTCAATACAGACCCATAGCAGTAGCATTACAGGGGTCTAGCAT  992

seq1  AAAATATTTTAAAAAGCATTTTAGCAGTCATATTTTATCCATTTAATAAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTAAAAAGCATTTTAGCAGTCATATTTTATCCATTTAATAAG  1042

seq1  TTCTAAAAAAAATTTGCCTCCCACTAGGACCTAGGATCTCCTTAATCCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAAAAATTTGCCTCCCACTAGGACCTAGGATCTCCTTAATCCTT  1092

seq1  TGGCTTCTAGTACGTGGTGTGAGTTCCTTCCTGCAGAGTGAATTTTGAAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTAGTACGTGGTGTGAGTTCCTTCCTGCAGAGTGAATTTTGAAT  1142

seq1  TC  1145
      ||
seq2  TC  1144