BAC Information

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BAC

Clone NameB6Ng01-152F10
Chromosome16 (Build37)
Map Location 79,096,515 - 79,240,709
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F10.bB6Ng01-152F10.g
ACCDH947937DH947938
length1,2051,080
definitionDH947937|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F10, 5' end.DH947938|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,239,472 - 79,240,709)(79,096,515 - 79,097,607)
sequence
gaattctcatatggaaacagagaggggtccggtataccaggtggagattt
gtgctcagttagaccattaacgcatattaaattactacaaagccttgtcc
ccaccacatgaagaataatattcctagtgtggactaattataccaatgac
tacactgaaatgacatccttaatcagcaatcatatttatgaaggtgacat
ttctcacttgttttgatctctagacttagaatttgaaaaggagaataaat
tagcgtatagcagagtcttaatctacagcattatttggcagttaactgaa
atagctttatttccctcaacagcaataaaagagaaagaactaattgcccc
tttttataggtgcagttggaacttaaagctccagagacagtatgagcact
gaaccactcttagagtctattacaccatctgcaccttgaaattacagaca
ccaaatcgacaaacaacagaacttccactcatgctaaatattttattcta
ggttctcaaattgtttattaacattctttggggattctcaggagtgaaaa
caaattcacacctaaaagaatcaggtcttcaagttatatgttgtcagata
gaatcttaagcaaaatgtgaagtaagttttcagaattttaaataagtttg
gaattttaaagaatggcctgtaatattgttgtctttctaagaacctcatc
ttgtgatttacaaaataataataatctgcaaatatctacttagaaatcat
cctttgtccaaagagcatgggccacagtgtagtaaaccttcagacattca
ttttgtcaaaaatgcatccatcagcccaaatataaatctcaaagaatgcc
tttgtatgatgtagcaattgtcagaataaatatcaatataaaactacatt
cgacaaagaggtgtttgggtttccgaacataaccattcaacaattgagtc
aattaaatatagatttttatatttaattcaccaagaacatctgaaattgg
aaaaaaaacatgagtctatgagatgagacaatacatatgacatgctgaag
aaaactcacatcttgacgaaatattttttcatatcataaataaactaagt
tcagtaatcatcaaatggttgttattcctaattacattaaatataggggt
gttggtaatttcgaagtctttttccaacttaaaaataaaagtgtattctc
tgtac
gaattcactggagcaatcatgacatgaagcttttgtgtgtaacaaagcga
gttctgctttgtttaaggcccattccatgacatggaacccatacccagta
ctgtttgggtggccaaaaatctgagactaaatagaccagagacctaggga
aaaaggaaacactgctgttctactaaaacagtgattctcaactagtgggt
cacaggtcacatattgaatattctgcataacagatgtttttacattatga
tttatgacagtaacaatattacagttataaagtagcaacaaaaataattt
tatgcttagggtcaccacaacatgaagaacaacattaaagggtcatagca
taaggatggttgagaaccagcattcatgaaaggaagttagcaataaaatg
actcctaagaccattctgttatactcatagattggtatcttgctcagcca
ccatcagggagactttctcctctagagatgctcagccagacaatatgcaa
aacataaaggaccctgggatgcttttccacaaagggatgtttccttcgaa
tcccatcccttgagagctcaaggaactctgtggaagaggatttagaaaga
atgtaagtggcatagaggatagaagaggggtttctagatctctcatcttt
taatcccaaagctatctccagttcacagatactcatagattggtatcttg
ctcagccaccatcagggagacttttctcctctagagatgctcagccagac
aatatgcaaaacataaaggaccctgggatgctttccataaagggatgttt
ccttcgaatcccatcccttgagagctcaaggaactctgtggaagaggatt
tagaaagaatgtaagtggcatagaggatagaagaagggtttctagatctc
tcatcttaatcccaaagctatctccagttcacagacattaaagtgtaagc
gcaatgtccaacattttataaaataaactccatagttctttggagttctt
tgtttcattcatcacaggatgttctcagatttgtgacttatttttctact
atggtatttgagctttatttgaagtatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79239472_79240709
seq2: B6Ng01-152F10.b_46_1250 (reverse)

seq1  GTACA-TGAATACATTTTTATTTTTAAAGTTTGGAGAAAGAATTTTCTAG  49
      |||||  ||||||| ||||||||||||   ||||| ||||| |    | |
seq2  GTACAGAGAATACACTTTTATTTTTAA--GTTGGAAAAAGACT----TCG  44

seq1  AAATTTAACAACACACCTTATATTTAAATGGTTAAATAAGGAAATAACAA  99
      ||| ||| |||||| || |||||||||    |  ||| ||| ||||||||
seq2  AAA-TTACCAACAC-CCCTATATTTAA----TGTAATTAGG-AATAACAA  87

seq1  ACATATGATGATTACTGGAAAACTTTAGTTTATTTATGAATATGAAAAAA  149
       ||| ||||||||||||   ||| |||||||||||||| |||||||||||
seq2  CCATTTGATGATTACTG---AAC-TTAGTTTATTTATG-ATATGAAAAAA  132

seq1  TATTTTCGTCAAGATGGTGAAGTATTTCTTTCAGCATGTCATAATGTATT  199
      || |||||||||||| ||| ||| |||| ||||||||||||| ||||| |
seq2  TA-TTTCGTCAAGAT-GTG-AGT-TTTC-TTCAGCATGTCAT-ATGTA-T  175

seq1  TGTCTCATCTCATAGACCTCATGTTTTTTTTTTCCAATTTTCAGATGTTC  249
      |||||||||||||||| ||||||  |||||||||||| ||||||||||||
seq2  TGTCTCATCTCATAGA-CTCATG--TTTTTTTTCCAA-TTTCAGATGTTC  221

seq1  TTTGGTTGAATTAAATATAAAAATCTATATTTTAATTTGACTCAATTTGT  299
      ||  | ||||||||||||||||||||||||||  | ||||||||| ||||
seq2  TT--GGTGAATTAAATATAAAAATCTATATTT--AATTGACTCAA-TTGT  266

seq1  TGAATGGTTATGTTCGGAAAACCCAAACACCTCTTTGTCGAATGTAGTTT  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAATGGTTATGTTCGG-AAACCCAAACACCTCTTTGTCGAATGTAGTTT  315

seq1  TATATTGATATTTATTCTGACAATTGCTACATCATACAAAGGCATTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGATATTTATTCTGACAATTGCTACATCATACAAAGGCATTCTTT  365

seq1  GAGATTTATATTTGGGCTGATGGATGCATTTTTGACAAAATGAATGTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTATATTTGGGCTGATGGATGCATTTTTGACAAAATGAATGTCTG  415

seq1  AAGGTTTACTACACTGTGGCCCATGCTCTTTGGACAAAGGATGATTTCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTACTACACTGTGGCCCATGCTCTTTGGACAAAGGATGATTTCTA  465

seq1  AGTAGATATTTGCAGATTATTATTATTTTGTAAATCACAAGATGAGGTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATATTTGCAGATTATTATTATTTTGTAAATCACAAGATGAGGTTC  515

seq1  TTAGAAAGACAACAATATTACAGGCCATTCTTTAAAATTCCAAACTTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGACAACAATATTACAGGCCATTCTTTAAAATTCCAAACTTATT  565

seq1  TAAAATTCTGAAAACTTACTTCACATTTTGCTTAAGATTCTATCTGACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTGAAAACTTACTTCACATTTTGCTTAAGATTCTATCTGACAA  615

seq1  CATATAACTTGAAGACCTGATTCTTTTAGGTGTGAATTTGTTTTCACTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAACTTGAAGACCTGATTCTTTTAGGTGTGAATTTGTTTTCACTCC  665

seq1  TGAGAATCCCCAAAGAATGTTAATAAACAATTTGAGAACCTAGAATAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCCCCAAAGAATGTTAATAAACAATTTGAGAACCTAGAATAAAA  715

seq1  TATTTAGCATGAGTGGAAGTTCTGTTGTTTGTCGATTTGGTGTCTGTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCATGAGTGGAAGTTCTGTTGTTTGTCGATTTGGTGTCTGTAAT  765

seq1  TTCAAGGTGCAGATGGTGTAATAGACTCTAAGAGTGGTTCAGTGCTCATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTGCAGATGGTGTAATAGACTCTAAGAGTGGTTCAGTGCTCATA  815

seq1  CTGTCTCTGGAGCTTTAAGTTCCAACTGCACCTATAAAAAGGGGCAATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGGAGCTTTAAGTTCCAACTGCACCTATAAAAAGGGGCAATTA  865

seq1  GTTCTTTCTCTTTTATTGCTGTTGAGGGAAATAAAGCTATTTCAGTTAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCTCTTTTATTGCTGTTGAGGGAAATAAAGCTATTTCAGTTAAC  915

seq1  TGCCAAATAATGCTGTAGATTAAGACTCTGCTATACGCTAATTTATTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAATAATGCTGTAGATTAAGACTCTGCTATACGCTAATTTATTCTC  965

seq1  CTTTTCAAATTCTAAGTCTAGAGATCAAAACAAGTGAGAAATGTCACCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAAATTCTAAGTCTAGAGATCAAAACAAGTGAGAAATGTCACCTT  1015

seq1  CATAAATATGATTGCTGATTAAGGATGTCATTTCAGTGTAGTCATTGGTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATATGATTGCTGATTAAGGATGTCATTTCAGTGTAGTCATTGGTA  1065

seq1  TAATTAGTCCACACTAGGAATATTATTCTTCATGTGGTGGGGACAAGGCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTCCACACTAGGAATATTATTCTTCATGTGGTGGGGACAAGGCT  1115

seq1  TTGTAGTAATTTAATATGCGTTAATGGTCTAACTGAGCACAAATCTCCAC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTAATTTAATATGCGTTAATGGTCTAACTGAGCACAAATCTCCAC  1165

seq1  CTGGTATACC-AACCCCTCTCTGTTTCCATATGAGAATTC  1238
      ||||||||||  ||||||||||||||||||||||||||||
seq2  CTGGTATACCGGACCCCTCTCTGTTTCCATATGAGAATTC  1205

seq1: chr16_79096515_79097607
seq2: B6Ng01-152F10.g_69_1148

seq1  GAATTCACTGGAGCAATCATGACATGAAGCTTTTGTGTGTAACAAAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAGCAATCATGACATGAAGCTTTTGTGTGTAACAAAGCGA  50

seq1  GTTCTGCTTTGTTTAAGGCCCATTCCATGACATGGAACCCATACCCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTTTGTTTAAGGCCCATTCCATGACATGGAACCCATACCCAGTA  100

seq1  CTGTTTGGGTGGCCAAAAATCTGAGACTAAATAGACCAGAGACCTAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGGGTGGCCAAAAATCTGAGACTAAATAGACCAGAGACCTAGGGA  150

seq1  AAAAGGAAACACTGCTGTTCTACTAAAACAGTGATTCTCAACTAGTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAACACTGCTGTTCTACTAAAACAGTGATTCTCAACTAGTGGGT  200

seq1  CACAGGTCACATATTGAATATTCTGCATAACAGATGTTTTTACATTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTCACATATTGAATATTCTGCATAACAGATGTTTTTACATTATGA  250

seq1  TTTATGACAGTAACAATATTACAGTTATAAAGTAGCAACAAAAATAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACAGTAACAATATTACAGTTATAAAGTAGCAACAAAAATAATTT  300

seq1  TATGCTTAGGGTCACCACAACATGAAGAACAACATTAAAGGGTCATAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTAGGGTCACCACAACATGAAGAACAACATTAAAGGGTCATAGCA  350

seq1  TAAGGATGGTTGAGAACCAGCATTCATGAAAGGAAGTTAGCAATAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATGGTTGAGAACCAGCATTCATGAAAGGAAGTTAGCAATAAAATG  400

seq1  ACTCCTAAGACCATTCTGTTATACTCATAGATTGGTATCTTGCTCAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAAGACCATTCTGTTATACTCATAGATTGGTATCTTGCTCAGCCA  450

seq1  CCATCAGGGAGACTTTCTCCTCTAGAGATGCTCAGCCAGACAATATGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGGAGACTTTCTCCTCTAGAGATGCTCAGCCAGACAATATGCAA  500

seq1  AACATAAAGGACCCTGGGATGCTTTTCCACAAAGGGATGTTTCCTTCGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAGGACCCTGGGATGCTTTTCCACAAAGGGATGTTTCCTTCGAA  550

seq1  TCCCATCCCTTGAGAGCTCAAGGAACTCTGTGGAAGAGGATTTAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCTTGAGAGCTCAAGGAACTCTGTGGAAGAGGATTTAGAAAGA  600

seq1  ATGTAAGTGGCATAGAGGATAGAAGAGGGGTTTCTAGATCTCTCATC-TT  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGTAAGTGGCATAGAGGATAGAAGAGGGGTTTCTAGATCTCTCATCTTT  650

seq1  TAATCCCAAAGCTATCTCCAGTTCACAGATACTCATAGATTGGTATCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAAAGCTATCTCCAGTTCACAGATACTCATAGATTGGTATCTTG  700

seq1  CTCAGCCACCATCAGGGAGAC-TTTCTCCTCTAGAGATGCTCAGCCAGAC  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCAGCCACCATCAGGGAGACTTTTCTCCTCTAGAGATGCTCAGCCAGAC  750

seq1  AATATGCAAAACATAAAGGACCCTGGGATGCTTTTCCATAAAGGGATGTT  798
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATATGCAAAACATAAAGGACCCTGGGATGC-TTTCCATAAAGGGATGTT  799

seq1  TCCTTCGAATCCCATCCCTTGAGAGCTCAAGGAACTCTGTGGAAGAGGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCGAATCCCATCCCTTGAGAGCTCAAGGAACTCTGTGGAAGAGGAT  849

seq1  TTAGAAAGAATGTAAGTGGCATAGAGGATAGAAGAGGGGTTTCTAGATCT  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTAGAAAGAATGTAAGTGGCATAGAGGATAGAAGAAGGGTTTCTAGATCT  899

seq1  CTCATCTTTAATCCCAAAGCTATCTCCAGTTCACAGACATTAAAGTGTAA  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATC-TTAATCCCAAAGCTATCTCCAGTTCACAGACATTAAAGTGTAA  948

seq1  GCGCAATGTCCAACATTTTATAAAATAAACTCAATAGTTTCTTTGGAGGT  998
      |||||||||||||||||||||||||||||||| |||| ||||||||| ||
seq2  GCGCAATGTCCAACATTTTATAAAATAAACTCCATAG-TTCTTTGGA-GT  996

seq1  TCTTTGTTTCATTCATCACAGAATGTTCTCAGGAATTTGTTGACTTATTT  1048
      ||||||||||||||||||||| ||||||||||  ||||| ||||||||||
seq2  TCTTTGTTTCATTCATCACAGGATGTTCTCAG--ATTTG-TGACTTATTT  1043

seq1  TTCTACCTTATGGGTTATTTGTAGCTTTATATTGAAGGTTATTTT  1093
      ||||||  |||||  |||||| |||||||| ||||||  ||||||
seq2  TTCTAC--TATGG--TATTTG-AGCTTTAT-TTGAAG--TATTTT  1080