BAC Information

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BAC

Clone NameB6Ng01-152H12
Chromosome16 (Build37)
Map Location 36,863,729 - 36,997,560
singlet/doubletdoublet
Overlap geneEaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252
Upstream geneParp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023
Downstream genePolq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58, Gpr156, LOC100043271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152H12.bB6Ng01-152H12.g
ACCDH948035DH948036
length1,1161,069
definitionDH948035|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H12, 5' end.DH948036|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,863,729 - 36,864,847)(36,996,500 - 36,997,560)
sequence
gaattcacatgaaggaaaaaaaagttaaagttgttgcctttgggatttgt
aaaactggtcctttaaacaacagaattaggctagccaactttctctggaa
aggaccagataaggaaatattttaggctttgcaagctatagcctgtaata
gctacttaacagttgaagcacaaaagcagctgtagataacggttagacta
acagtagttaagcaagtatagctgtatgccaataaaaatttgtagacatt
tgagttttgacttatacatacgtttacatgtcgtaaagtatccttttaaa
tttttagccatgtaaagtgaaataaacaggtatttactatacagaaacaa
cttactgtttttgacctgtaagctatgacttgccaatcagtgcttttaaa
actgtatataattttagtgaaaataaaaacatgggagaaaaatgaagaat
tgaaaagaataatttcatatatgtaccaaaatgtataagtctattatgga
agacttgagaaaacattcagaaaatttgcttttatcagtagtctcatagc
ttaaaatgttaaaatgttttatctttaccaagccttttcttactatctct
tttatatttggaatactgtaaaacatgtaaaattagggtccttgtttctt
attggcatagagcatgtcctatagaaaccattggtttgcccagaattgta
gagtttataaggaattagaattgagattagaactcaatgtttatttcctt
ttatatactcatttcttactgcaaacataatgagtgcttaatatgaactc
agagactatggcagcactcataggacctctacaagttcaagccagatgaa
atccccagcactgagagtggaaagtaaacatagtccccatccctaaccat
ggaattgctacctgctgataaagtgaaaatcagtgagtgtcactgggtta
ttcatgcccaggtgttagctggccaatacaaaactccattggttttggtt
tttgtttgtgttttatttttgtgggcctcttatatattttgtttgtttgg
caatttctaactttttgttaatgtttggttttgtttttgagaattaagtt
gaaaacatgaagttag
gaattcactctattgtccaggctggccttgaactcatagatctgcctgcc
tctggctccccaagtgccaagactaaagatatgcactaccaccaccaagc
tctgttgtccatttttaagtgggacatctgtcttcttaattttgacatgt
agtagtttgatattgttctgctttgcttttctgttgctgtgacaaaacac
tgacctaaaataactaggatagaggcaggagagggtttgttagcttacag
gctacagtgcatcagcaggaaagccaggctaggaaccaaagcagaaacca
tggagaaatgttgcttactgcatttcttgtctagcttattcagctatctc
tttttcttaatggagaaaatgtgtattgaaaattagccagctggactcag
tatagctgatttcagtctctgacatccagagatccagagcatcatcatca
ggaggcagctaagcatgtcttcttctccccaccaggtctcatcagggtat
tgaccttggctacatcaatgtcacagagtctcttcatagcctgtttgatc
tggtggcatgttggccttgacatccacaatgaacagaagtgtgttgtctt
ttgtctcattcacggctgacttgctggctggagggacttcctgtctttct
cctgggttccataatgtctgggtatttgcctctagagcagcaggttctga
agctacaggaagatgggtgacaggtgaggtccttctgtggctgtgggaca
gctctgccttcttgggtttccaatgcctttgcttcaacttttggctttgg
ctttggctttggctctgacaggacaggaggtttctttcttttatgggtac
catcttagggaaagcttcatctaccttttcttaatagaaccaagcatacc
tgcccatgaatagtctggaatccttccttcattcgattaagagtaagaaa
aagcctccacagacaatatcccaggctcattgttatggaagcattctgga
attccccttcccaggtgtcaaactgacaaccagaataaccaccacaggtt
tgcattttagattcaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36863729_36864847
seq2: B6Ng01-152H12.b_44_1159

seq1  GAATTCACATGAAGGAAAAAAAAGTTAAAGTTGTTGCCTTTGGGATTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGAAGGAAAAAAAAGTTAAAGTTGTTGCCTTTGGGATTTGT  50

seq1  AAAACTGGTCCTTTAAACAACAGAATTAGGCTAGCCAACTTTCTCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGTCCTTTAAACAACAGAATTAGGCTAGCCAACTTTCTCTGGAA  100

seq1  AGGACCAGATAAGGAAATATTTTAGGCTTTGCAAGCTATAGCCTGTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGATAAGGAAATATTTTAGGCTTTGCAAGCTATAGCCTGTAATA  150

seq1  GCTACTTAACAGTTGAAGCACAAAAGCAGCTGTAGATAACGGTTAGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTAACAGTTGAAGCACAAAAGCAGCTGTAGATAACGGTTAGACTA  200

seq1  ACAGTAGTTAAGCAAGTATAGCTGTATGCCAATAAAAATTTGTAGACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTTAAGCAAGTATAGCTGTATGCCAATAAAAATTTGTAGACATT  250

seq1  TGAGTTTTGACTTATACATACGTTTACATGTCGTAAAGTATCCTTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTGACTTATACATACGTTTACATGTCGTAAAGTATCCTTTTAAA  300

seq1  TTTTTAGCCATGTAAAGTGAAATAAACAGGTATTTACTATACAGAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCCATGTAAAGTGAAATAAACAGGTATTTACTATACAGAAACAA  350

seq1  CTTACTGTTTTTGACCTGTAAGCTATGACTTGCCAATCAGTGCTTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTTTTTGACCTGTAAGCTATGACTTGCCAATCAGTGCTTTTAAA  400

seq1  ACTGTATATAATTTTAGTGAAAATAAAAACATGGGAGAAAAATGAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATATAATTTTAGTGAAAATAAAAACATGGGAGAAAAATGAAGAAT  450

seq1  TGAAAAGAATAATTTCATATATGTACCAAAATGTATAAGTCTATTATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAATAATTTCATATATGTACCAAAATGTATAAGTCTATTATGGA  500

seq1  AGACTTGAGAAAACATTCAGAAAATTTGCTTTTATCAGTAGTCTCATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAGAAAACATTCAGAAAATTTGCTTTTATCAGTAGTCTCATAGC  550

seq1  TTAAAATGTTAAAATGTTTTATCTTTACCAAGCCTTTTCTTACTATCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTTAAAATGTTTTATCTTTACCAAGCCTTTTCTTACTATCTCT  600

seq1  TTTATATTTGGAATACTGTAAAACATGTAAAATTAGGGTCCTTGTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTGGAATACTGTAAAACATGTAAAATTAGGGTCCTTGTTTCTT  650

seq1  ATTGGCATAGAGCATGTCCTATAGAAACCATTGGTTTGCCCAGAATTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCATAGAGCATGTCCTATAGAAACCATTGGTTTGCCCAGAATTGTA  700

seq1  GAGTTTATAAGGAATTAGAATTGAGATTAGAACTCAATGTTTATTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATAAGGAATTAGAATTGAGATTAGAACTCAATGTTTATTTCCTT  750

seq1  TTATATACTCATTTCTTACTGCAAACATAATGAGTGCTTAATATGAACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACTCATTTCTTACTGCAAACATAATGAGTGCTTAATATGAACTC  800

seq1  AGAGACTATGGCAGCACTCATAGGACCTCTACAAGTTCAAGCCAGATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTATGGCAGCACTCATAGGACCTCTACAAGTTCAAGCCAGATGAA  850

seq1  AT-CCCAGCACTGAGAGTGGAAAGTAAACATAGTCCCCATCCCTAACCAT  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGCACTGAGAGTGGAAAGTAAACATAGTCCCCATCCCTAACCAT  900

seq1  GGAATTGCTACCTGCTGATAAAGTGAAAATCAGTGAGTGTCACTGGG-TA  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGAATTGCTACCTGCTGATAAAGTGAAAATCAGTGAGTGTCACTGGGTTA  950

seq1  TCCATGCCCAGGTG-TAGCTGGCCAATACAAAACTCCATTGGTTTTGGTT  997
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCATGCCCAGGTGTTAGCTGGCCAATACAAAACTCCATTGGTTTTGGTT  1000

seq1  TT--GTTGTGTTTTA-TTTTGTGGGCTCTTTATTATATTTTGTTTTGTTT  1044
      ||   |||||||||| |||||||||| || |  ||||||||| |||||||
seq2  TTTGTTTGTGTTTTATTTTTGTGGGC-CTCTTATATATTTTG-TTTGTTT  1048

seq1  GGGCATTTTTCTAACTTTTTGTTATTGTTTTGGTTTTTGGTTTTTGAGAG  1094
      ||  |  ||||||||||||||||| || |||||||||  |||||||||| 
seq2  GGCAA--TTTCTAACTTTTTGTTAATG-TTTGGTTTT--GTTTTTGAGA-  1092

seq1  ATTAAGTATGAGAACATGAAGTTAG  1119
      ||||||| ||| |||||||||||||
seq2  ATTAAGT-TGAAAACATGAAGTTAG  1116

seq1: chr16_36996500_36997560
seq2: B6Ng01-152H12.g_68_1136 (reverse)

seq1  GACTTGGATCTAAAATGCAAACCTGTGGTGGTTATCTTGGTTGTCAGTTT  50
      |||||| ||||||||||||||||||||||||||||  |||||||||||||
seq2  GACTTGAATCTAAAATGCAAACCTGTGGTGGTTATTCTGGTTGTCAGTTT  50

seq1  GACACCTGGGAAGGGGGAATCCCAGAAATTGCTTCCATTACACTG-GCCT  99
      |||||||||||| ||||||| ||||||  ||||||||| ||| || ||||
seq2  GACACCTGGGAA-GGGGAATTCCAGAA--TGCTTCCATAACAATGAGCCT  97

seq1  GTGGATA-TGTCTGT-GAGGCCTTTTCTTACTCCTAATCG-ATGGAGGAG  146
      | ||||| ||||||| ||||| ||||||||||| |||||| ||| |||| 
seq2  G-GGATATTGTCTGTGGAGGCTTTTTCTTACTCTTAATCGAATGAAGGAA  146

seq1  GTAT--CCGACTGTTCTTGGGCAGGTATGCCTTGGTTCTA-TAAG-AAAG  192
      | ||  | |||| ||| |||||||||||| |||||||||| |||| ||||
seq2  GGATTCCAGACTATTCATGGGCAGGTATG-CTTGGTTCTATTAAGAAAAG  195

seq1  GTAGCTG-AGCTTTCCCTAAGATGGTA-CCATAAAAAGAAGGAACCTCCT  240
      |||| || ||||||||||||||||||| ||||||||  ||| ||||||||
seq2  GTAGATGAAGCTTTCCCTAAGATGGTACCCATAAAAGAAAGAAACCTCCT  245

seq1  GTCCTGTCAGAGCCAAAGCCAAAGCCAAAGCC-AAAGTTGAAGCAAAGGC  289
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTCCTGTCAGAGCCAAAGCCAAAGCCAAAGCCAAAAGTTGAAGCAAAGGC  295

seq1  ATTGGAAA-CCAAGAAGGCAGAGCTGT-CCACAGCCACAGAAGGACCTCA  337
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  ATTGGAAACCCAAGAAGGCAGAGCTGTCCCACAGCCACAGAAGGACCTCA  345

seq1  CCTGTCACCCATCTTCCTGTAGCTTCAGAACCTGCTGCTCTAGAGGCAAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCACCCATCTTCCTGTAGCTTCAGAACCTGCTGCTCTAGAGGCAAA  395

seq1  TACCCAGACATTATGGAACCCAGGAGAAAGACAGGAAGTCCCTCCAGCCA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGACATTATGGAACCCAGGAGAAAGACAGGAAGTCCCTCCAGCCA  445

seq1  GCAAGTCAGCCGTGAATGAGACAAAAGACAACACACTTCTGTTCATTGTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCAGCCGTGAATGAGACAAAAGACAACACACTTCTGTTCATTGTG  495

seq1  GATGTCAAGGCCAACATGCCACCAGATCAAACAGGCTATGAAGAGACTCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAAGGCCAACATGCCACCAGATCAAACAGGCTATGAAGAGACTCT  545

seq1  GTGACATTGATGTAGCCAAGGTCAATACCCTGATGAGACCTGGTGGGGAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTGATGTAGCCAAGGTCAATACCCTGATGAGACCTGGTGGGGAG  595

seq1  AAGAAGACATGCTTAGCTGCCTCCTGATGATGATGCTCTGGATCTCTGGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACATGCTTAGCTGCCTCCTGATGATGATGCTCTGGATCTCTGGA  645

seq1  TGTCAGAGACTGAAATCAGCTATACTGAGTCCAGCTGGCTAATTTTCAAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGACTGAAATCAGCTATACTGAGTCCAGCTGGCTAATTTTCAAT  695

seq1  ACACATTTTCTCCATTAAGAAAAAGAGATAGCTGAATAAGCTAGACAAGA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTCTCCATTAAGAAAAAGAGATAGCTGAATAAGCTAGACAAGA  745

seq1  AATGCAGTAAGCAACATTTCTCCATGGTTTCTGCTTTGGTTCCTAGCCTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGTAAGCAACATTTCTCCATGGTTTCTGCTTTGGTTCCTAGCCTG  795

seq1  GCTTTCCTGCTGATGCACTGTAGCCTGTAAGCTAACAAACCCTCTCCTGC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTGCTGATGCACTGTAGCCTGTAAGCTAACAAACCCTCTCCTGC  845

seq1  CTCTATCCTAGTTATTTTAGGTCAGTGTTTTGTCACAGCAACAGAAAAGC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCCTAGTTATTTTAGGTCAGTGTTTTGTCACAGCAACAGAAAAGC  895

seq1  AAAGCAGAACAATATCAAACTACTACATGTCAAAATTAAGAAGACAGATG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAACAATATCAAACTACTACATGTCAAAATTAAGAAGACAGATG  945

seq1  TCCCACTTAAAAATGGACAACAGAGCTTGGTGGTGGTAGTGCATATCTTT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTAAAAATGGACAACAGAGCTTGGTGGTGGTAGTGCATATCTTT  995

seq1  AGTCTTGGCACTTGGGGAGCCAGAGGCAGGCAGATCTATGAGTTCAAGGC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGGCACTTGGGGAGCCAGAGGCAGGCAGATCTATGAGTTCAAGGC  1045

seq1  CAGCCTGGACAATAGAGTGAATTC  1061
      ||||||||||||||||||||||||
seq2  CAGCCTGGACAATAGAGTGAATTC  1069