BAC Information

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BAC

Clone NameB6Ng01-152J04
Chromosome16 (Build37)
Map Location 15,220,836 - 15,221,913
singlet/doubletsinglet
Overlap geneLOC385748
Upstream geneMyh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653
Downstream geneLOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152J04.b
ACCDH948115
length1,065
definitionDH948115|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J04, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcccagggtcttgctcaaggacgttctagggctgttggaac
actggcagaaggctttagagagcacgtggatccatacactagactaacgc
gggaatggagaattaatgtatgggttagagagaacgtcagactccaggag
gagagcttccttgaaactctttttgcctcatgagcagcttttaggcatcc
ctacctgacaagctgactcgaccagagtgccatggtaaggcaggagacct
caaggctttcaaggaatgccaagtgctctgctgcagtctgggccttcttc
agctcttctatatctagctccaactggtaatactgtggcctctcctgacc
tttctactactgctcagtccctacagctgtgccaaaacttgcacctcttg
ctacagttgctgccactgctcccagggctgtggctccatacaagtatgcc
tccagtgtctgaagccctcaccctaccattcatctgctgcaggacaccta
gtctgcagtccatgcccagggtcagaagcacatgattgcctccatgctgg
ctgcagcgcccctcccctcccccatcccccaggagcagaagcagatgctg
ggggagcatctgtttccacttatccaaacaatgcattcaaacctggctgg
aaaaattactgagatgctgctggaaatcgacaactctgaactgctgcaca
tgctggagtccctccattccaaggtggatgaagctgtggcagtcctgcag
gctcatcatgccacgtaagaaactgcccagaaggtgggcactgttgcttc
tgctacctcttagacaagaaaaaagaataaaaaaccaaataacccctcat
ggcatctagctaaggtatgaagatgacctagtttgtctgtggacttccat
accaagaacccagatgcaaattcaatagtcattttgaatcaaagtcaatg
atgaagcacctagaaatttcaattatagatatattctctggcttctgttg
tgcacagatgatacttttttttttttcattgtgggtctgtattcccgatc
tcagaattggctttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15220836_15221913
seq2: B6Ng01-152J04.b_44_1108

seq1  GAATTCCAAGCCCAGGGTCTTGCTCAAGGACGTTCTAGGGCTGTTGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCCAGGGTCTTGCTCAAGGACGTTCTAGGGCTGTTGGAAC  50

seq1  ACTGGCAGAAGGCTTTAGAGAGCACGTGGATCCATACACTAGACTAACGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGAAGGCTTTAGAGAGCACGTGGATCCATACACTAGACTAACGC  100

seq1  GGGAATGGAGAATTAATGTATGGGTTAGAGAGAACGTCAGACTCCAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGAGAATTAATGTATGGGTTAGAGAGAACGTCAGACTCCAGGAG  150

seq1  GAGAGCTTCCTTGAAACTCTTTTTGCCTCATGAGCAGCTTTTAGGCATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTTCCTTGAAACTCTTTTTGCCTCATGAGCAGCTTTTAGGCATCC  200

seq1  CTACCTGACAAGCTGACTCGACCAGAGTGCCATGGTAAGGCAGGAGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGACAAGCTGACTCGACCAGAGTGCCATGGTAAGGCAGGAGACCT  250

seq1  CAAGGCTTTCAAGGAATGCCAAGTGCTCTGCTGCAGTCTGGGCCTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTTCAAGGAATGCCAAGTGCTCTGCTGCAGTCTGGGCCTTCTTC  300

seq1  AGCTCTTCTATATCTAGCTCCAACTGGTAATACTGTGGCCTCTCCTGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCTATATCTAGCTCCAACTGGTAATACTGTGGCCTCTCCTGACC  350

seq1  TTTCTACTACTGCTCAGTCCCTACAGCTGTGCCAAAACTTGCACCTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTACTGCTCAGTCCCTACAGCTGTGCCAAAACTTGCACCTCTTG  400

seq1  CTACAGTTGCTGCCACTGCTCCCAGGGCTGTGGCTCCATACAAGTATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTGCTGCCACTGCTCCCAGGGCTGTGGCTCCATACAAGTATGCC  450

seq1  TCCAGTGTCTGAAGCCCTCACCCTACCATTCATCTGCTGCAGGACACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTCTGAAGCCCTCACCCTACCATTCATCTGCTGCAGGACACCTA  500

seq1  GTCTGCAGTCCATGCCCAGGGTCAGAAGCACATGATTGCCTCCATGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGTCCATGCCCAGGGTCAGAAGCACATGATTGCCTCCATGCTGG  550

seq1  CTGCAGCGCCCCTCCCCTCCCCCATCCCCCAGGAGCAGAAGCAGATGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCGCCCCTCCCCTCCCCCATCCCCCAGGAGCAGAAGCAGATGCTG  600

seq1  GGGGAGCATCTGTTTCCACTTATCCAAACAATGCATTCAAACCTGGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCATCTGTTTCCACTTATCCAAACAATGCATTCAAACCTGGCTGG  650

seq1  AAAAATTACTGAGATGCTGCTGGAAATCGACAACTCTGAACTGCTGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACTGAGATGCTGCTGGAAATCGACAACTCTGAACTGCTGCACA  700

seq1  TGCTGGAGTCCCTCCATTCCAAGGTGGATGAAGCTGTGGCAGTCCTGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGTCCCTCCATTCCAAGGTGGATGAAGCTGTGGCAGTCCTGCAG  750

seq1  GCTCATCATGCCACGAAAGAAACTGCCCAGAAGGTGGGCACTGTTGCTGC  800
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  GCTCATCATGCCACGTAAGAAACTGCCCAGAAGGTGGGCACTGTTGCTTC  800

seq1  TGCTACCTCTTAGACAAGAAAAAAGAATAAAAAACCAAATAACCCCTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTCTTAGACAAGAAAAAAGAATAAAAAACCAAATAACCCCTCAT  850

seq1  GGCATCTAGCTAAGGTATGAAGATGACCTAGTTTGTCTGTGGACTTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTAGCTAAGGTATGAAGATGACCTAGTTTGTCTGTGGACTTCCAT  900

seq1  ACCAAGAACCAAGATGCAAATTCAATAGGTCATTTTGAATCAAAAGGTCA  950
      |||||||||| |||||||||||||||| ||||||||||||||||  ||||
seq2  ACCAAGAACCCAGATGCAAATTCAATA-GTCATTTTGAATCAAA--GTCA  947

seq1  ATGATGAAGCACCTAGAAATTTTCAATTATAAGAATATATTCTCTGGCTT  1000
      ||||||||||||||||||| |||||||||||   ||||||||||||||||
seq2  ATGATGAAGCACCTAGAAA-TTTCAATTATA--GATATATTCTCTGGCTT  994

seq1  CTGTTGTGGCACAGATGATAACTTTTTTTTTTTCTATGTGGGTTCTGTTT  1050
      ||||||| ||||||||||||  ||||||||||||  |||||| ||||   
seq2  CTGTTGT-GCACAGATGATACTTTTTTTTTTTTCATTGTGGG-TCTG---  1039

seq1  ATTTTCCCGATCTCAGGAATTGGCTTTG  1078
       | |||||||||||| ||||||||||||
seq2  -TATTCCCGATCTCA-GAATTGGCTTTG  1065