BAC Information

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BAC

Clone NameB6Ng01-153D21
Chromosome16 (Build37)
Map Location 36,589,786 - 36,778,660
singlet/doubletdoublet
Overlap geneEG667232, Cd86, Ildr1, LOC667246, Slc15a2
Upstream geneSema5b, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr
Downstream geneLOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153D21.bB6Ng01-153D21.g
ACCDH948612DH948613
length1,092881
definitionDH948612|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D21, 5' end.DH948613|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,777,567 - 36,778,660)(36,589,786 - 36,590,580)
sequence
gaattcttttcctattttctttctctctcaaccactgccacggttttcag
aaagcatctatatattagccattttctctctatcatcatttcttatgaca
gagaagtatacttcaatgaaaaagaactgtttgattcagtctgatccaaa
tttaagtgtttattcaccatctcttatttgtccaaataatcacaagcata
aggagataaattatacgtaatatgttttcacattgtattatgttttcaca
ttgttagagttcaaatagctttaatgagagcaaatcatggtagtttcaac
aggaaattctacaaatcaccttttacctctactgaaatttgtcaggatag
tagtgatgactctgttaacaaatgacatgtccctgtctagattcttaccc
actcactcagtaattcatcctgttcatcttccctgccttctctaattcta
tattttcctcattctcttactgttgtatttctgggttgggcctcaacttt
tgctttttgtctagttagctctttcctaactgtcatatttctaccaagtg
ataattctcccctttccctttccacagacttgactgtcccttagcaagtc
tggaggtgtcaagttcagctataggcagacagccactcggagtgttggaa
cctggagtttaagtgccagtatgcatttataattgcatatttctgttcac
gttggctgttctttatcctagcttcatgtccccacgttgaatcaactatg
ccatcctccgagttctgagtgtgcagcagcagcatgcacgtttgtcctcc
tcaatcctaactccagctgccatcagttgccaccactttggctttatatg
catcgtcgctaaactgaaaagggacaccttaaatgttttcactgtgtctt
tctctatattgagccttctaggtactatgatctaaactaaagcatcatca
gcctgagaacaggggtacacagtaatgagaagattttttattttgctttg
gaccttgtttttgttttaaacagcagactctggggaatgacttgatgtct
ccctttagttagggatggattaaaccacttggctcattttcc
gaattccaggatagcccagagctacacagagaaaccctgtccccaaaacc
aactctcccaaatgttttttacaaagagataactatgtaagcaagagaaa
gcagaaggcaatggaattgctactaagtagtgcacctgttgtttgttgct
gtgatagacctatgagttttaggcctttggaaagggtggaatagcttgga
acttcagctagaacagaccaattcagagagacaatgcctaaaagagagat
ccagcttgtggggtttcagagaggagcaagggacccattggcgagatttg
tatcatggtttctgctttccactcttagtgagaggagcagtggatggagc
agaaagaggaaaactacagtttgtgggctgaggggggtgagtttaaagtt
ccatttagtacaggaactgaggaagtagttgcaattgctcaagacctggg
ccctgggaacagaaaggtctcattttgcactggggcaatagaaaaggggg
cttaagggcaagatcccacccattaaagtttccatcttgtgcagctgcac
atgcctttaaaggaagagtttaagggaacagtgctgttggagggacttcc
tccaaaaccctctaagaaaagatctcagaagatggaacgatctcccatgc
tcatggattggcaggatcaacatttgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagagcaatctgcaaattcatctgggataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaagctctggtggaatca
ccatgcctgacctaaagctttactacagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36777567_36778660
seq2: B6Ng01-153D21.b_45_1136 (reverse)

seq1  GGAAAATTAGCCAAGTGTTTAAATCATCCCCTATCTAAA-GGAGACATCA  49
      ||||||| ||||||||| || ||||   ||||| ||||| ||||||||||
seq2  GGAAAATGAGCCAAGTGGTTTAATCCATCCCTAACTAAAGGGAGACATCA  50

seq1  AGTCACTCCCCAGAGTCTGCTGTTTAAAACAAAAACAAGGTCCAAAGCAA  99
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCCCCAGAGTCTGCTGTTTAAAACAAAAACAAGGTCCAAAGCAA  100

seq1  A--TAAAAATCTTCTTCATTACTGTGTACCCCTGTTCTCAGGCTTGATGA  147
      |   |||||||||| |||||||||||||||||||||||||||| ||||||
seq2  AATAAAAAATCTTC-TCATTACTGTGTACCCCTGTTCTCAGGC-TGATGA  148

seq1  TGCTTTAGTTTAGATCATAGTACCTAGAAGGCTCAATTATAGAGAAAAGA  197
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TGCTTTAGTTTAGATCATAGTACCTAGAAGGCTCAA-TATAGAG-AAAGA  196

seq1  CAACAGTGAAAACATTTTAGGTGTCCCTTTTCAGTTTAGCGACGATGCAT  247
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  C-ACAGTGAAAACATTTAAGGTGTCCCTTTTCAGTTTAGCGACGATGCAT  245

seq1  ATAAAGCCAAAGTGGTGGCAACTGATGGCAGCTGGAGTTAGGATTGAGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCAAAGTGGTGGCAACTGATGGCAGCTGGAGTTAGGATTGAGGA  295

seq1  GGACAAACGTGCATGCTGCTGCTGCACACTCAGAACTCGGAGGATGGCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACGTGCATGCTGCTGCTGCACACTCAGAACTCGGAGGATGGCAT  345

seq1  AGTTGATTCAACGTGGGGACATGAAGCTAGGATAAAGAACAGCCAACGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTCAACGTGGGGACATGAAGCTAGGATAAAGAACAGCCAACGTG  395

seq1  AACAGAAATATGCAATTATAAATGCATACTGGCACTTAAACTCCAGGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATATGCAATTATAAATGCATACTGGCACTTAAACTCCAGGTTC  445

seq1  CAACACTCCGAGTGGCTGTCTGCCTATAGCTGAACTTGACACCTCCAGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTCCGAGTGGCTGTCTGCCTATAGCTGAACTTGACACCTCCAGAC  495

seq1  TTGCTAAGGGACAGTCAAGTCTGTGGAAAGGGAAAGGGGAGAATTATCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAGGGACAGTCAAGTCTGTGGAAAGGGAAAGGGGAGAATTATCAC  545

seq1  TTGGTAGAAATATGACAGTTAGGAAAGAGCTAACTAGACAAAAAGCAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGAAATATGACAGTTAGGAAAGAGCTAACTAGACAAAAAGCAAAA  595

seq1  GTTGAGGCCCAACCCAGAAATACAACAGTAAGAGAATGAGGAAAATATAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCCCAACCCAGAAATACAACAGTAAGAGAATGAGGAAAATATAG  645

seq1  AATTAGAGAAGGCAGGGAAGATGAACAGGATGAATTACTGAGTGAGTGGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGAAGGCAGGGAAGATGAACAGGATGAATTACTGAGTGAGTGGG  695

seq1  TAAGAATCTAGACAGGGACATGTCATTTGTTAACAGAGTCATCACTACTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATCTAGACAGGGACATGTCATTTGTTAACAGAGTCATCACTACTA  745

seq1  TCCTGACAAATTTCAGTAGAGGTAAAAGGTGATTTGTAGAATTTCCTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAAATTTCAGTAGAGGTAAAAGGTGATTTGTAGAATTTCCTGTT  795

seq1  GAAACTACCATGATTTGCTCTCATTAAAGCTATTTGAACTCTAACAATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTACCATGATTTGCTCTCATTAAAGCTATTTGAACTCTAACAATGT  845

seq1  GAAAACATAATACAATGTGAAAACATATTACGTATAATTTATCTCCTTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATAATACAATGTGAAAACATATTACGTATAATTTATCTCCTTAT  895

seq1  GCTTGTGATTATTTGGACAAATAAGAGATGGTGAATAAACACTTAAATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGATTATTTGGACAAATAAGAGATGGTGAATAAACACTTAAATTT  945

seq1  GGATCAGACTGAATCAAACAGTTCTTTTTCATTGAAGTATACTTCTCTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGACTGAATCAAACAGTTCTTTTTCATTGAAGTATACTTCTCTGT  995

seq1  CATAAGAAATGATGATAGAGAGAAAATGGCTAATATATAGATGCTTTCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAATGATGATAGAGAGAAAATGGCTAATATATAGATGCTTTCTG  1045

seq1  AAAACCGTGGCAGTGGTTGAGAGAGAAAGAAAATAGGAAAAGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCGTGGCAGTGGTTGAGAGAGAAAGAAAATAGGAAAAGAATTC  1092

seq1: chr16_36589786_36590580
seq2: B6Ng01-153D21.g_69_864

seq1  GAATTCCAGGATAGCCCAGAGCTACACAGAGAAACCCTGTCCCCAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCCAGAGCTACACAGAGAAACCCTGTCCCCAAAACC  50

seq1  AACTCTCCCAAATGTTTTTTACAAAGAGATAACTATGTAAGCAAGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCCAAATGTTTTTTACAAAGAGATAACTATGTAAGCAAGAGAAA  100

seq1  GCAGAAGGCAATGGAATTGCTACTAAGTAGTGCACCTGTTGTTTGTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGCAATGGAATTGCTACTAAGTAGTGCACCTGTTGTTTGTTGCT  150

seq1  GTGATAGACCTATGAGTTTTAGGCCTTTGGAAAGGGTGGAATAGCTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGACCTATGAGTTTTAGGCCTTTGGAAAGGGTGGAATAGCTTGGA  200

seq1  ACTTCAGCTAGAACAGACCAATTCAGAGAGACAATGCCTAAAAGAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCTAGAACAGACCAATTCAGAGAGACAATGCCTAAAAGAGAGAT  250

seq1  CCAGCTTGTGGGGTTTCAGAGAGGAGCAAGGGACCCATTGGCGAGATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGTGGGGTTTCAGAGAGGAGCAAGGGACCCATTGGCGAGATTTG  300

seq1  TATCATGGTTTCTGCTTTCCACTCTTAGTGAGAGGAGCAGTGGATGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGGTTTCTGCTTTCCACTCTTAGTGAGAGGAGCAGTGGATGGAGC  350

seq1  AGAAAGAGGAAAACTACAGTTTGTGGGCTGAGGGGGGTGAGTTTAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGAAAACTACAGTTTGTGGGCTGAGGGGGGTGAGTTTAAAGTT  400

seq1  CCATTTAGTACAGGAACTGAGGAAGTAGTTGCAATTGCTCAAGACCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGTACAGGAACTGAGGAAGTAGTTGCAATTGCTCAAGACCTGGG  450

seq1  CCCTGGGAACAGAAAGGTCTCATTTTGCACTGGGGCAATAGAAAAGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAACAGAAAGGTCTCATTTTGCACTGGGGCAATAGAAAAGGGGG  500

seq1  CTTAAGGGCAAGATCCCACCCATTAAAGTTTCCATCTTGTGCAGCTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGGCAAGATCCCACCCATTAAAGTTTCCATCTTGTGCAGCTGCAC  550

seq1  ATGCCTTTAAAGGAAGAGTTTAAGGGAACAGTGCTGTTGGAGGGACTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTAAAGGAAGAGTTTAAGGGAACAGTGCTGTTGGAGGGACTTCC  600

seq1  TCCAAAACCCTCTAAGAAAAGATCTCAGAAGATGGAACGATCTCCCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACCCTCTAAGAAAAGATCTCAGAAGATGGAACGATCTCCCATGC  650

seq1  TCATGGATTGGCAGGATCAACA-TTGTAAAAATGGCTATCTTGCCAAAAG  699
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATGGATTGGCAGGATCAACATTTGTAAAAATGGCTATCTTGCCAAAAG  700

seq1  CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC  750

seq1  AACGAATTAGAAAGAGCAATCTGCAAATTCATCTGGAATAACAAAA  795
      |||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACGAATTAGAAAGAGCAATCTGCAAATTCATCTGGGATAACAAAA  796