BAC Information

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BAC

Clone NameB6Ng01-153H10
Chromosome16 (Build37)
Map Location 27,022,731 - 27,023,838
singlet/doubletsinglet
Overlap genenone
Upstream geneLeprel1, Cldn1, Cldn16, LOC100043057, Il1rap, Gm606
Downstream geneOstn, Uts2d, Ccdc50
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153H10.bB6Ng01-153H10.g
ACCDH948770DH948771
length1,103893
definitionDH948770|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H10, 5' end.DH948771|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgggagtccatttaggcctggacattgttggttgaaagatt
tttttattattctttcaatctcttcctttgttatggctttacattcctcg
tctcttttttatttaacattggatggatcatgaaattaatacatttattt
tatatgttcaagcataatagagtatatataagttcttaatgtttttagtt
acaatattctgtatttctttggtgtctgttgtgataattccctgttcatc
tgttcatttgtattatctctttcatttttctggttgtttgtgccaaggaa
ctgttaactttagtttaccttggcaaagaaccagctctgtcatctgcaaa
tccacaagcaagattctaggcacaaggatggcccctatttgtgtgcaagc
aatcttttctgactaaattacttcttgccttggcttcgcattctccaaac
aactataatctaccagcttgcaaacctaatttcagatctacatcgataaa
ccttttttctaggtaaactcctttgcctagcctagctttagacctaaagt
ttaggagcatcattcccggatctagttaaacagctcacctacaaacgtta
tctgctttacctcagatcatacatctgtcttggcttaatctaaggaaggt
cagattatcacatcagatatatggccaaggaaagaagtccatgtggggaa
gccaaatcatagaagcaaaaccactgtaactgctccaaagaacatgtctt
ccaatcaaatgtgatctagataactcaggatacagcattctaatgagata
gataactgagggtccagaattaaaacaaaccatcatgaatttcatctaag
aattcaagaaattttaaacaggacagaacacatacttcattgaactctaa
gaagacaacaataaatacttgagtgatattctagaaagtacaaataataa
agataatttacttgaatttatttatttatttgaaactgaattgaataagg
tatagaaacaagaaatgaatacagttgaattaaaggtggattgaacactc
tgttatcatatttggaaaactcaggagaaaatctttcagtggaatgaatc
aaa

gaattctttgtttaactctgtaccccatttttaatagggttaaactgaag
tccaacttctcgattctttatatatattgaatattatcttcctatcagat
ttaggatgggtgaagatcatttttcaatatgttggttgctttttttgttt
tattgacagtgtcctttggcttacagaagctttgcaatttcttgagatcc
catttgtccactcttgatcttacagtacaagccattggtattctgttcag
gaatctttctgctgtgcccgtatcttcgaggttcttccccactttctctt
ttataagtttcagtgtctctggttttatgtagagttatttgatccactta
gacttgagttttgtacacaaatataagaatggatcaattcactaaccacc
agttgacccagcaccatttgttgaagatgctgtcctctttccactggatg
gttttagcttctttgtcaaagatcaagtgaccataggtgtgtgggttcat
ttctgggtcttcaattctgttccattgatctacctgtctgtcactgtacc
agtaccatgaagtctttatcacaattggtctgtagtgcagcttgaggtca
ggggagactatctttttacagcatgcattttggtgaacttgtgtacctat
aagtggacagctgtgccagtgcaggtttgattttgggtctctatttcatt
ggaacacatggctagattatgtcaatattgtgatgcttttgccattattg
tttatacagcataatgggagatccatatggtgatacttcagcatcgtacc
tatacttaaaaattattttggctattcacatcttttgttgttactcataa
cattaggatttctctcccattctgtggagatttttgacgaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27022731_27023838
seq2: B6Ng01-153H10.b_45_1147

seq1  GAATTCTTCTGGGAGTCCATTTAGGCCTGGACATTGTTGGTTGAAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGGAGTCCATTTAGGCCTGGACATTGTTGGTTGAAAGATT  50

seq1  TTTTTATTATTCTTTCAATCTCTTCCTTTGTTATGGCTTTACATTCCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATTCTTTCAATCTCTTCCTTTGTTATGGCTTTACATTCCTCG  100

seq1  TCTCTTTTTTATTTAACATTGGATGGATCATGAAATTAATACATTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTTATTTAACATTGGATGGATCATGAAATTAATACATTTATTT  150

seq1  TATATGTTCAAGCATAATAGAGTATATATAAGTTCTTAATGTTTTTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTCAAGCATAATAGAGTATATATAAGTTCTTAATGTTTTTAGTT  200

seq1  ACAATATTCTGTATTTCTTTGGTGTCTGTTGTGATAATTCCCTGTTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTCTGTATTTCTTTGGTGTCTGTTGTGATAATTCCCTGTTCATC  250

seq1  TGTTCATTTGTATTATCTCTTTCATTTTTCTGGTTGTTTGTGCCAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTGTATTATCTCTTTCATTTTTCTGGTTGTTTGTGCCAAGGAA  300

seq1  CTGTTAACTTTAGTTTACCTTGGCAAAGAACCAGCTCTGTCATCTGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACTTTAGTTTACCTTGGCAAAGAACCAGCTCTGTCATCTGCAAA  350

seq1  TCCACAAGCAAGATTCTAGGCACAAGGATGGCCCCTATTTGTGTGCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAGCAAGATTCTAGGCACAAGGATGGCCCCTATTTGTGTGCAAGC  400

seq1  AATCTTTTCTGACTAAATTACTTCTTGCCTTGGCTTCGCATTCTCCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTCTGACTAAATTACTTCTTGCCTTGGCTTCGCATTCTCCAAAC  450

seq1  AACTATAATCTACCAGCTTGCAAACCTAATTTCAGATCTACATCGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAATCTACCAGCTTGCAAACCTAATTTCAGATCTACATCGATAAA  500

seq1  CCTTTTTTCTAGGTAAACTCCTTTGCCTAGCCTAGCTTTAGACCTAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTCTAGGTAAACTCCTTTGCCTAGCCTAGCTTTAGACCTAAAGT  550

seq1  TTAGGAGCATCATTCCCGGATCTAGTTAAACAGCTCACCTACAAACGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGCATCATTCCCGGATCTAGTTAAACAGCTCACCTACAAACGTTA  600

seq1  TCTGCTTTACCTCAGATCATACATCTGTCTTGGCTTAATCTAAGGAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTACCTCAGATCATACATCTGTCTTGGCTTAATCTAAGGAAGGT  650

seq1  CAGATTATCACATCAGATATATGGCCAAGGAAAGAAGTCCATGTGGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATCACATCAGATATATGGCCAAGGAAAGAAGTCCATGTGGGGAA  700

seq1  GCCAAATCATAGAAGCAAAACCACTGTAACTGCTCCAAAGAACATGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATCATAGAAGCAAAACCACTGTAACTGCTCCAAAGAACATGTCTT  750

seq1  CCAATCAAATGTGATCTAGATAACTCAGGATACAGCATTCTAATGAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAAATGTGATCTAGATAACTCAGGATACAGCATTCTAATGAGATA  800

seq1  GATAACTGAGGGTCCAGAATTAAAACAAACCATCATGAATTTCATCTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGAGGGTCCAGAATTAAAACAAACCATCATGAATTTCATCTAAG  850

seq1  AATTCAAGAAA-TTTAAACAGGACAGAACACATACTTCATTGAACTCTAA  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAGAAATTTTAAACAGGACAGAACACATACTTCATTGAACTCTAA  900

seq1  GAAGACAACAATAAATACTTGAGTGATATTCTAGAAAGTACAAATAATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAACAATAAATACTTGAGTGATATTCTAGAAAGTACAAATAATAA  950

seq1  AGATAATTTACTTGAATTTATTTATTTATTTGAAAACTGAATTGAATAAA  999
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  AGATAATTTACTTGAATTTATTTATTTATTTG-AAACTGAATTGAAT-AA  998

seq1  GATATAGAAACAAAGAAATGAATACAAGTTGAATTAAAGGTGGAATTGAA  1049
      | ||||||||| ||||||||||||| ||||||||||||||||| ||||||
seq2  GGTATAGAAAC-AAGAAATGAATAC-AGTTGAATTAAAGGTGG-ATTGAA  1045

seq1  CAACTCTGTAATCAAATTT-GAAAACCCAGGAGAAAATCTTACAAGTGGA  1098
      | ||||||| |||| |||| |||||| |||||||||||||| | ||||||
seq2  C-ACTCTGTTATCATATTTGGAAAACTCAGGAGAAAATCTTTC-AGTGGA  1093

seq1  ATGAATCAAA  1108
      ||||||||||
seq2  ATGAATCAAA  1103


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