BAC Information

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BAC

Clone NameB6Ng01-153I18
Chromosome16 (Build37)
Map Location 80,297,221 - 80,298,243
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik
Downstream geneLOC621365, LOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153I18.b
ACCDH948829
length1,023
definitionDH948829|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccatacctaaacatgaaaagtctcaatttgaacaaagaa
aaatacaaggggatttcttttctcttagtttttagtttatattagtttta
tgtttgtgtactgttttttaaactaattcttctgtagaaaatgtatcttg
ttattcagtgtaatatacaagcaattagtaagctcggaatcaaatccatt
tgtgaggcagtaagattacttaagttctaatagtgttctatccttaagtt
cttgacaccaaatgaaatcaatgttatgtagcccaaatccctttgtgttt
gacattccttcaagttcccagtacactatattattgttcttaagcattca
ttccataaccctcaggagctctattcatagccaatgaacttttctgtgct
ttcaataaatagttagacttcttattccctatataatatctcagccttgt
gatttacctgacaacacttaagccaatacatatatatatatacatatata
catatataatattgaatattatatgtatatgttatatatgtatatgtcat
tctgaatatttcattggaattatttgactaatgtctctttattttttact
catatcatttttccccaacagttttctccttcagaagaaattcagaaagg
gtacaacctgaaataatttgtgctcagatatttttttcagatattcctct
acaataagactaggaggcttaagagttctctgttatatggcacatgataa
aattttaacatataagacagagaaactatgactgctttcccagtcagtct
aatatgagaatatgagagcatcacccacacattgctcaagtttttatgta
ttgtaatagaatcacttttggtttatagcatatgtatgtgcaagctgtat
gtatgaatattcagttttggatgggtacatgtctctgcatgacttcacgt
atgcatgtgtatagaggtcagagtttacagagtcttcctcagtctctctc
tacttaactggtaaagcaggggc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80297221_80298243
seq2: B6Ng01-153I18.b_44_1066

seq1  GAATTCAAGGCCCATACCTAAACATGAAAAGTCTCAATTTGAACAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCCATACCTAAACATGAAAAGTCTCAATTTGAACAAAGAA  50

seq1  AAATACAAGGGGATTTCTTTTCTCTTAGTTTTTAGTTTATATTAGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAGGGGATTTCTTTTCTCTTAGTTTTTAGTTTATATTAGTTTTA  100

seq1  TGTTTGTGTACTGTTTTTTAAACTAATTCTTCTGTAGAAAATGTATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTACTGTTTTTTAAACTAATTCTTCTGTAGAAAATGTATCTTG  150

seq1  TTATTCAGTGTAATATACAAGCAATTAGTAAGCTCGGAATCAAATCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAGTGTAATATACAAGCAATTAGTAAGCTCGGAATCAAATCCATT  200

seq1  TGTGAGGCAGTAAGATTACTTAAGTTCTAATAGTGTTCTATCCTTAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCAGTAAGATTACTTAAGTTCTAATAGTGTTCTATCCTTAAGTT  250

seq1  CTTGACACCAAATGAAATCAATGTTATGTAGCCCAAATCCCTTTGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACACCAAATGAAATCAATGTTATGTAGCCCAAATCCCTTTGTGTTT  300

seq1  GACATTCCTTCAAGTTCCCAGTACACTATATTATTGTTCTTAAGCATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCCTTCAAGTTCCCAGTACACTATATTATTGTTCTTAAGCATTCA  350

seq1  TTCCATAACCCTCAGGAGCTCTATTCATAGCCAATGAACTTTTCTGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAACCCTCAGGAGCTCTATTCATAGCCAATGAACTTTTCTGTGCT  400

seq1  TTCAATAAATAGTTAGACTTCTTATTCCCTATATAATATCTCAGCCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAATAGTTAGACTTCTTATTCCCTATATAATATCTCAGCCTTGT  450

seq1  GATTTACCTGACAACACTTAAGCCAATACATATATATATATACATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCTGACAACACTTAAGCCAATACATATATATATATACATATATA  500

seq1  CATATATAATATTGAATATTATATGTATATGTTATATATGTATATGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAATATTGAATATTATATGTATATGTTATATATGTATATGTCAT  550

seq1  TCTGAATATTTCATTGGAATTATTTGACTAATGTCTCTTTATTTTTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATTTCATTGGAATTATTTGACTAATGTCTCTTTATTTTTTACT  600

seq1  CATATCATTTTTCCCCAACAG-TTTCTCCTTCAGAAGAAATTCAGAAAGG  649
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATATCATTTTTCCCCAACAGTTTTCTCCTTCAGAAGAAATTCAGAAAGG  650

seq1  GTACAACCTGAAATAATTTGTGCTCAGATATTTTTTTCAGATATTCCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACCTGAAATAATTTGTGCTCAGATATTTTTTTCAGATATTCCTCT  700

seq1  ACAATAAGACTAGGAGGCTTAAGAGTTCTCTGTTATATGGCACATGATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGACTAGGAGGCTTAAGAGTTCTCTGTTATATGGCACATGATAA  750

seq1  AACTTTAACATATAAGACAGAGAAACTATGACTGCTTTCCCAGTCAGTCT  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAACATATAAGACAGAGAAACTATGACTGCTTTCCCAGTCAGTCT  800

seq1  AATATGAGAATATGAGAGCATCACCCACACATTGCTCAAGTTTTTATGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGAATATGAGAGCATCACCCACACATTGCTCAAGTTTTTATGTA  850

seq1  TTGTAATAGAATCACTTTTGGTTTATAGCATATGTATGTGCAAGCTGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATAGAATCACTTTTGGTTTATAGCATATGTATGTGCAAGCTGTAT  900

seq1  GTATGAATATTCAGTTTTGTATGGGTACATGTCTCTGCATGACTTCACGT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTATGAATATTCAGTTTTGGATGGGTACATGTCTCTGCATGACTTCACGT  950

seq1  ATGCATGTGTATAGAGGTCAGAGTTTACAGAGTCTTCTTCAGTCTCTCTC  999
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGCATGTGTATAGAGGTCAGAGTTTACAGAGTCTTCCTCAGTCTCTCTC  1000

seq1  TACCTTACATGTTAAAGCAGGGGC  1023
      || ||||  || ||||||||||||
seq2  TA-CTTAACTGGTAAAGCAGGGGC  1023


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