BAC Information

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BAC

Clone NameB6Ng01-153J10
Chromosome16 (Build37)
Map Location 33,976,919 - 34,064,739
singlet/doubletdoublet
Overlap geneKalrn, LOC100043670
Upstream geneLrch3, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps
Downstream geneRopn1, Ccdc14, Mylk, Ptplb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153J10.bB6Ng01-153J10.g
ACCDH948859DH948860
length9351,098
definitionDH948859|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J10, 5' end.DH948860|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,063,801 - 34,064,739)(33,976,919 - 33,978,022)
sequence
gaattcaggagactcccatgaagatagaaccaaaggctttgactcttcct
ttctgtgaagactgttggcaaagactgtcctatgaagagctgacattacc
aagggccaggagctagaaagattcctgtcctgtgtggccactgcatatga
ctcagttctgtggcttggatctgtgttctacaggccagagcatcagcaaa
ggaagaaagcaaagaagggaccactgagtggaagtgagctaagacagcta
ctaccaaagttgcaaggttcacagaggcccaagaatttatacttcagtga
gaaaaatcaaacaccagtgttaagtgcagagaaattcagatatacaacat
ttataaagatactgagtctctgtaaagagccgtagtctggtagaggactc
attagagaagggtgtttgtttgtttgcttgcttgcttgcttgcttgcttg
attttgtttatgtttttttgtttttgtttttgtttttgagacagtatttt
gtgtagccctgcctatcctggaacccactctgtagaccaggctggcctcg
aactcagagatttatctgcctctgcctctgcctctgcctctgcctctgcc
tctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctc
tgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctg
cctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcc
tctgcctctgcctcctgagtgctggggattaaaggtgtacaccatcactg
cccagcaagaagagagtcttgaagctggcacaataactttggtgcaacca
caggagcagggcttgcaacgtgtgtttgagattgagaatgactacaaggg
agagaagactatcctgtgctacactgagtgtgcca
gaattccagcatagacagggctacacagagaaaccctttcttggaaaaaa
attttttttctttatgtgtacgtatctatatgagtgtattccatgttcgt
gcaggtgctgttagaggccgtaagaaaacactgggtctactacagttgga
gttgcaggtggttgtgagccaagcaatatgagtgctggcaagagaacttg
ggtcttaagcactgagtcatctctccagccctccgaagctcctttttctt
acagaatgaatgggaacaggacattaagtgatgtctataaagttagactg
cttggttaaagctttcccttaccccgtgtgccaccatctctctggtgtgt
ttccttcattcctgaacaatgcacttaggtagagtgaaagtctagttcta
gtttaatagtcacatgacatcacaggaaagacaaaagaaatgtaaatctt
ccccctagcagtagtgatgcatgtctttaatcccagcacttgggagtcag
aggcaggcagatctctgagtttgaggccagcctagtcagcagaatgagtt
ccaggacagagaaaccctgtctttataaaaacaaaacaacaacaataaaa
agaaattcaattttgtattttgtattcctcaaggaaatgtctgggaagct
gaacccgtctatttcactgtaacaggcactgactttttattaccttttat
gtccaaatgtgcgaccctacagttgtgcaggtactgcagagcttccatga
tgtctcgaattgtagaaagctaccttttcttccatcagctcatcatgatt
cataatggaagtccaagagtcggccgtctcccatctgacagcaaagaggg
gtggggggagaaatagagaaatgacccatgcacttgctaaaaattctaag
atgtctcttataaataagcttggtattgaaccacatgtattttagagccc
aagtaagtgccccttcagactcagatgaatcaagttcaatgagtacacgg
aggagaatcctatcgtcttcacaacaccgtttgtcgactctaggtcaatc
tggctttagaggttagggttgatgagcaaaagataagaaaagaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_34063801_34064739
seq2: B6Ng01-153J10.b_43_977 (reverse)

seq1  TGGCACACTCAGTGTAGCACAGGATAGTCTTTCTCTCCCTTTGTAGTCAT  50
      ||||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  TGGCACACTCAGTGTAGCACAGGATAGTC-TTCTCTCCC-TTGTAGTCAT  48

seq1  TCTCAAGTCTCAAACACACGTTGCAAGGCCCTGCTCCTGCTGGTTGCACC  100
      |||||| ||||||||||||||||||| |||||||||||| ||||||||||
seq2  TCTCAA-TCTCAAACACACGTTGCAA-GCCCTGCTCCTG-TGGTTGCACC  95

seq1  AAAGTTCTTGTGCCAGCTTCAAGACTCTCTTCTTGCTGGGCAGTGATGGT  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATTGTGCCAGCTTCAAGACTCTCTTCTTGCTGGGCAGTGATGGT  145

seq1  GTACACCTTTAAT-CCCAGCACTCAGGAGGCAGAGGCAGAGGCAGAGGCA  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTACACCTTTAATCCCCAGCACTCAGGAGGCAGAGGCAGAGGCAGAGGCA  195

seq1  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  245

seq1  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  295

seq1  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  345

seq1  GAGGCAGAGGCAGAGGCAGAGGCAGATAAATCTCTGAGTTCGAGGCCAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAGAGGCAGATAAATCTCTGAGTTCGAGGCCAGC  395

seq1  CTGGTCTACAGAGTGGGTTCCAGGATAGGCAGGGCTACACAAAATACTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGGGTTCCAGGATAGGCAGGGCTACACAAAATACTGT  445

seq1  CTCAAAAACAAAAACAAAAACAAAAAAACATAAACAAAATCAAGCAAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAACAAAAACAAAAACAAAAAAACATAAACAAAATCAAGCAAGCA  495

seq1  AGCAAGCAAGCAAGCAAACAAACAAACACCCTTCTCTAATGAGTCCTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAAGCAAGCAAACAAACAAACACCCTTCTCTAATGAGTCCTCTA  545

seq1  CCAGACTACGGCTCTTTACAGAGACTCAGTATCTTTATAAATGTTGTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTACGGCTCTTTACAGAGACTCAGTATCTTTATAAATGTTGTATA  595

seq1  TCTGAATTTCTCTGCACTTAACACTGGTGTTTGATTTTTCTCACTGAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTCTCTGCACTTAACACTGGTGTTTGATTTTTCTCACTGAAGT  645

seq1  ATAAATTCTTGGGCCTCTGTGAACCTTGCAACTTTGGTAGTAGCTGTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCTTGGGCCTCTGTGAACCTTGCAACTTTGGTAGTAGCTGTCTT  695

seq1  AGCTCACTTCCACTCAGTGGTCCCTTCTTTGCTTTCTTCCTTTGCTGATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTTCCACTCAGTGGTCCCTTCTTTGCTTTCTTCCTTTGCTGATG  745

seq1  CTCTGGCCTGTAGAACACAGATCCAAGCCACAGAACTGAGTCATATGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCCTGTAGAACACAGATCCAAGCCACAGAACTGAGTCATATGCAG  795

seq1  TGGCCACACAGGACAGGAATCTTTCTAGCTCCTGGCCCTTGGTAATGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACACAGGACAGGAATCTTTCTAGCTCCTGGCCCTTGGTAATGTCA  845

seq1  GCTCTTCATAGGACAGTCTTTGCCAACAGTCTTCACAGAAAGGAAGAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCATAGGACAGTCTTTGCCAACAGTCTTCACAGAAAGGAAGAGTC  895

seq1  AAAGCCTTTGGTTCTATCTTCATGGGAGTCTCCTGAATTC  939
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTGGTTCTATCTTCATGGGAGTCTCCTGAATTC  935

seq1: chr16_33976919_33978022
seq2: B6Ng01-153J10.g_68_1165

seq1  GAATTCCAGCATAGACAGGGCTACACAGAGAAACCCTTTCTTGGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATAGACAGGGCTACACAGAGAAACCCTTTCTTGGAAAAAA  50

seq1  ATTTTTTTTCTTTATGTGTACGTATCTATATGAGTGTATTCCATGTTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCTTTATGTGTACGTATCTATATGAGTGTATTCCATGTTCGT  100

seq1  GCAGGTGCTGTTAGAGGCCGTAAGAAAACACTGGGTCTACTACAGTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGCTGTTAGAGGCCGTAAGAAAACACTGGGTCTACTACAGTTGGA  150

seq1  GTTGCAGGTGGTTGTGAGCCAAGCAATATGAGTGCTGGCAAGAGAACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGGTGGTTGTGAGCCAAGCAATATGAGTGCTGGCAAGAGAACTTG  200

seq1  GGTCTTAAGCACTGAGTCATCTCTCCAGCCCTCCGAAGCTCCTTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTAAGCACTGAGTCATCTCTCCAGCCCTCCGAAGCTCCTTTTTCTT  250

seq1  ACAGAATGAATGGGAACAGGACATTAAGTGATGTCTATAAAGTTAGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATGAATGGGAACAGGACATTAAGTGATGTCTATAAAGTTAGACTG  300

seq1  CTTGGTTAAAGCTTTCCCTTACCCCGTGTGCCACCATCTCTCTGGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTAAAGCTTTCCCTTACCCCGTGTGCCACCATCTCTCTGGTGTGT  350

seq1  TTCCTTCATTCCTGAACAATGCACTTAGGTAGAGTGAAAGTCTAGTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCATTCCTGAACAATGCACTTAGGTAGAGTGAAAGTCTAGTTCTA  400

seq1  GTTTAATAGTCACATGACATCACAGGAAAGACAAAAGAAATGTAAATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATAGTCACATGACATCACAGGAAAGACAAAAGAAATGTAAATCTT  450

seq1  CCCCCTAGCAGTAGTGATGCATGTCTTTAATCCCAGCACTTGGGAGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTAGCAGTAGTGATGCATGTCTTTAATCCCAGCACTTGGGAGTCAG  500

seq1  AGGCAGGCAGATCTCTGAGTTTGAGGCCAGCCTAGTCAGCAGAATGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAGATCTCTGAGTTTGAGGCCAGCCTAGTCAGCAGAATGAGTT  550

seq1  CCAGGACAGAGAAACCCTGTCTTTATAAAAACAAAACAACAACAATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGAGAAACCCTGTCTTTATAAAAACAAAACAACAACAATAAAA  600

seq1  AGAAATTCAATTTTGTATTTTGTATTCCTCAAGGAAATGTCTGGGAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCAATTTTGTATTTTGTATTCCTCAAGGAAATGTCTGGGAAGCT  650

seq1  GAACCCGTCTATTTCACTGTAACAGGCACTGACTTTTTATTACC-TTTAT  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAACCCGTCTATTTCACTGTAACAGGCACTGACTTTTTATTACCTTTTAT  700

seq1  GTCCAAATGTGCGACCCTACAGTTGTGCAGGTACTGCAGAGCTTCCATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAATGTGCGACCCTACAGTTGTGCAGGTACTGCAGAGCTTCCATGA  750

seq1  TGTCTCGAA-TGTAGAAAGCTACCTTTTCTTCCATCAGCTCATCATGATT  798
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGAATTGTAGAAAGCTACCTTTTCTTCCATCAGCTCATCATGATT  800

seq1  CATAA-GGTAGTCCAAGAGTCGGCCGTCATCCATCCTGACAGCAAAGAGG  847
      ||||| || |||||||||||||||||||  |||| |||||||||||||||
seq2  CATAATGGAAGTCCAAGAGTCGGCCGTCTCCCAT-CTGACAGCAAAGAGG  849

seq1  GGTGGGGGGAGAAATAGAGAAATGACCCATGCACATAGCTTAAAAAGTTC  897
      |||||||||||||||||||||||||||||||||| | |||  |||| |||
seq2  GGTGGGGGGAGAAATAGAGAAATGACCCATGCAC-TTGCT--AAAAATTC  896

seq1  TAGGAGGTCTCTTATTAATAAAGCTTGGTATTGCAACACACATGTATTTT  947
      || || ||||||||| ||| ||||||||||||| ||| ||||||||||||
seq2  TAAGATGTCTCTTATAAAT-AAGCTTGGTATTG-AAC-CACATGTATTTT  943

seq1  AGAGCCCAAAGTAAGTGCCACATTCAGAACTAGAATGAATCAAGTTACAA  997
      ||||||| ||||||||||| | ||||| |||   ||||||||||||   |
seq2  AGAGCCC-AAGTAAGTGCC-CCTTCAG-ACTCAGATGAATCAAGTT--CA  988

seq1  ATGAGTTACACGGCAGGAGAAATCCTTACAGCCTTACACAACACCGTTTT  1047
      ||||| ||||||| ||||| ||||| ||  | ||| |||||||||| |||
seq2  ATGAG-TACACGG-AGGAG-AATCC-TATCGTCTT-CACAACACCG-TTT  1032

seq1  GTTGACTCTAAGGTCTAACCTGGCTTTAAGAGGTTA-GGTTGAAG-----  1091
      || |||||| ||||| || |||||||| |||||||| |||||| |     
seq2  GTCGACTCT-AGGTC-AATCTGGCTTT-AGAGGTTAGGGTTGATGAGCAA  1079

seq1  ------AGAAAAGAAAAGG  1104
            |||||||||||||
seq2  AAGATAAGAAAAGAAAAGG  1098