BAC Information

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BAC

Clone NameB6Ng01-154E24
Chromosome16 (Build37)
Map Location 87,360,985 - 87,361,397
singlet/doubletsinglet
Overlap geneN6amt1
Upstream genenone
Downstream geneZfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154E24.bB6Ng01-154E24.g
ACCDH949390DH949391
length1,263407
definitionDH949390|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E24, 5' end.DH949391|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacacaccactttcaccaatggacagatcatggaaacagaaact
aaacagggacacactgaaactaacagaagtgatgaaacaaatggatctga
cagatatctacagaacattttatcctaaaacaaaaggatataccttcttc
tcagcacctcatggtaccttctccaaaattgaccacataataggtcacaa
aacaggcctcaacagattcaaaaatattgaaattgtcccatgtatcccat
cagatcaccatgcactaaggctgatcttcaataacaaaaaaaataacaga
aagcctacactcacgtggaaactgaacaacactcttctcaatgatacctt
ggtcaaggaaggaataaagaaagaaattaaagactttttagagtttaatg
aaaatgaagccacaacgtacccaaacctttgggacacaatgaaagcattt
ctaagagggaaactcatagctctgagtgcctccatgaagaaacgggagag
agcacatactagtagcttgacaacacatctaaaagctctagaaaaaaagg
aagcaaattcacccaagaggagtagacggcaggaaataatcaaactcagg
ggtgaaatcaaccaagtggaaacaagaagaactattcaaagaattaacca
aacgaggagttggttctttgagaaaatcaacaagatagataaacccttag
ctagactcactagagggcacagagacaaaatcctaattaacaaaatcaga
actgaaaagggagacataacaacagatcctgaagaaatccaaaacaccat
cagatccttctacaaaaggctatactcaacaaaactggaaaacctggacg
aaatggacaaatttctggacagataccaggtaccaaagttgaatcacgat
caagttgaccttctaaacagtcccatatcccctaaagaaatagaagcaat
tataaatagtctcccagccaaaaaagcccaggaccagacgggtttagtgc
agagttctatcagaccttcaagaagatctaattccagttctgcacaaact
ttttcacaatagaagtagaaagtactcctacccacctcatttatgagcca
ctatactctgatatctaaaccagaaagatccaacaagataagacttcgac
aatttctcttatgaatttcgaagcaaaatcctcaataattctctaaccga
atccagaacatttagcaatcatcatctgtgatcagtaggtgtattcacgg
caaagtcagcgta
ttaagacctatttttgaggatatgcttatagaagtatttttttcttctct
aattaaaaaaaaaatagtaatcattttaagtatacgagggctctggctgc
atgaatgcctgaaggccagaagatagaatcagattccattatccatggtt
gtgagacaacatgtggttgctaggaattgaactcaggacctctgaaagag
cagccagtggtcctaactgctgaaccatccatccagccccctttctgctc
ctttaaaagggaaacaataattactccttaaaaatatatatatatatata
tatatatatatatatatatatgaatgatataacttggcctgcaaaccaaa
agaagattagttttttccttcaccagtgcaagaatgagggattcactggt
gtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87360985_87361397
seq2: B6Ng01-154E24.g_67_479 (reverse)

seq1  CACACACACCAGTGAATCCCTCATTCTTGCACTGGTGAAGGAAAAAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACCAGTGAATCCCTCATTCTTGCACTGGTGAAGGAAAAAACTA  50

seq1  ATCTTCTTTTGGTTTGCAGGCCAAGTTATATCATTCATATATATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTTTGGTTTGCAGGCCAAGTTATATCATTCATATATATATATAT  100

seq1  ATATATATATATATATATATATATTTTTAAGGAGTAATTATTGTTTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATTTTTAAGGAGTAATTATTGTTTCCCT  150

seq1  TTTAAAGGAGCAGAAAGGGGGCTGGATGGATGGTTCAGCAGTTAGGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGAGCAGAAAGGGGGCTGGATGGATGGTTCAGCAGTTAGGACCA  200

seq1  CTGGCTGCTCTTTCAGAGGTCCTGAGTTCAATTCCTAGCAACCACATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCTCTTTCAGAGGTCCTGAGTTCAATTCCTAGCAACCACATGTT  250

seq1  GTCTCACAACCATGGATAATGGAATCTGATTCTATCTTCTGGCCTTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACAACCATGGATAATGGAATCTGATTCTATCTTCTGGCCTTCAGG  300

seq1  CATTCATGCAGCCAGAGCCCTCGTATACTTAAAATGATTACTATTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATGCAGCCAGAGCCCTCGTATACTTAAAATGATTACTATTTTTTT  350

seq1  TTTAATTAGAGAAGAAAAAAATACTTCTATAAGCATATCCTCAAAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAGAGAAGAAAAAAATACTTCTATAAGCATATCCTCAAAAATAG  400

seq1  GTCTTAAGAATTC  413
      |||||||||||||
seq2  GTCTTAAGAATTC  413