BAC Information

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BAC

Clone NameB6Ng01-155A21
Chromosome7 (Build37)16 (Build37)
Map Location 97,691,422 - 97,691,48046,388,268 - 46,389,422
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik
Downstream geneLOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155A21.bB6Ng01-155A21.g
ACCDH949936DH949937
length8231,131
definitionDH949936|Mus musculus domesticus DNA, BAC clone: B6Ng01-155A21, 5' end.DH949937|Mus musculus domesticus DNA, BAC clone: B6Ng01-155A21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(97,691,422 - 97,691,480)(46,388,268 - 46,389,422)
sequence
gaattcagtaagaagtccaagagacctgggatgagggaggctcccagaag
ccaatggaggtgaccttagcagaaatactcaacatttgggatatggaacc
tgaagagactacctccagtagccagatagggtccacagtagagggatgga
gacaccaacccacctacaaaacttttgagccaaaattggtcctgtctaaa
agaaatgcagggacaaagatggagcagagagtaaaggagtagctgactag
taatcggcccattttgagacccatcccatgggcaggcaccaaactatctc
attattaatgatgctgtgttgtgcttgcctactggagcctagcatagcaa
ccttctgagaggctcaacccagcagctaactgagacacatgcagataccc
acagacaaactggatgaaggtcagggaaccctgtagaagggttaggggaa
gaattgaaggccctcaaggagatggcaaccccacaggaagaccaaaagtg
tcaactaacctggacccctgggagctcccagagattgagccaccaaccca
agagcatacatgggctggtccatggccctcagaacatatgtagcagagtg
atgccgcatctggtctctgtgggagagcatgcacctaatcctgaagagac
ttgatgcacctggatggggggaggtggagctgctctcgcagaggtgaagt
ggatgggggaggaatttgtcaaggggagactaggaaaggggcaacatttg
gtatgtaaataaatgaatatgaaagatagaaagatagaaagaaagaaaga
aagaaagagagagagagggaggg
gaattctctgtcttcctcagaggttaatttcccttaatagcactcagtag
atctatgaagcccagggttacacacagtttttcaactgaatggacaccat
tgttttggttttcagtgctttttttcaaggaacaataaggattttaaatc
cactcgagtgtattgatgaaactaaattaaattcctctctgaaatcgtac
aaacagccccagcattcattatattttaactagaggcagcagaggtttgt
tctgcaagtactagtttactccagggcacagtacagctcagccacacctc
tgtactctcacatattctcgacataagtgcaaaattcccttaaattccct
cgcttcagtgcccagacgactgtccagcatcttgggtttcactgaatact
aaaaaaatcccaattcctttgtaaaagacctatattaagcagcaggtatt
gccgctagatcccctattgttccatttgtctctaaaggttcctatcaccc
ctctcccttctgctcctagctctaagctagtgctatccaacattccatct
ccagcccatttgctcagtctccatgtggtcctcgcctcttaacatgtctg
cttggcagctctgcccttcgagccagcggttctctgtctcacaaggctgc
actgatgggggtggggaataagatggctaagggctagcttcaagtgagat
ccctctttcaaagtggtttctgcaaaagcccctggacttagaaatcagaa
actctatagctattatatttttctattcttgttttgctatttttacttct
gaaacatgatctctgtctgaaaagacgctttctccgggttctcactctct
ccctattgaccccctcacactgaaagttccaccttatgctctgaacttcc
tacgctgacccaaaactaagtctctcagtgggaccccactctggtacttc
tatttaaaatagtagatctgcttcggagaaactctagctgtcccaggaaa
ccagtgaggcccaccactggctctgtcagtctcacagcaggctgctctga
aatctaactgaatttaatgtagtccctcacgtactgggtgttgatcctgg
tatggatgcgagtattttgcagccttgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97691422_97691480
seq2: B6Ng01-155A21.b_812_864 (reverse)

seq1  CCCTCCCTTCCTTCCCCCCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50
      ||||||||      | | |||||||||||||||||||||||||| |||||
seq2  CCCTCCCT------CTCTCTCTCTTTCTTTCTTTCTTTCTTTCTATCTTT  44

seq1  CTTTCTTTC  59
      || ||||||
seq2  CTATCTTTC  53

seq1: chr16_46388268_46389422
seq2: B6Ng01-155A21.g_62_1192 (reverse)

seq1  AATACAAGCTGTGCAAAATACTTCTGCCATTCATTACCCAGGATTCAACA  50
      ||||||||   |||||||||   ||  ||| |||   |||||| ||||||
seq2  AATACAAG-GCTGCAAAATA---CTCGCATCCAT--ACCAGGA-TCAACA  43

seq1  CCCAGGTACCGTGAAGGGACTACATTAAA-TCAGTTTAGATTTCAAGAAG  99
      |||| ||| |||| ||||||||||||||| |||| ||||||||||   ||
seq2  CCCA-GTA-CGTG-AGGGACTACATTAAATTCAG-TTAGATTTCA--GAG  87

seq1  CAAGGCTTGCTGTGAGACCTGGACAGAGCCAGTGTGGGGCCTCACTGGTT  149
      ||  || |||||||||||   |||||||||||||  |||||||||||| |
seq2  CA--GCCTGCTGTGAGAC--TGACAGAGCCAGTGGTGGGCCTCACTGG-T  132

seq1  TTCCTGGGGAACAGCTAGAGTTTCCTCCGAAGCAGATCTTACTATTTTTA  199
      ||||||||  ||||||||||||| |||||||||||||| ||||| |||||
seq2  TTCCTGGG--ACAGCTAGAGTTT-CTCCGAAGCAGATC-TACTA-TTTTA  177

seq1  AATAGAAGTACCAGAGTTGGGGTTCCCACTGAGAGACTTAGTTTTGGGTC  249
      |||||||||||||||||  ||| |||||||||||||||||||||||||||
seq2  AATAGAAGTACCAGAGT--GGGGTCCCACTGAGAGACTTAGTTTTGGGTC  225

seq1  AGCGTAGGAAGTTCAGAGCATAAGGTGGAACTTTCAGTGTGAGGGGGTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTAGGAAGTTCAGAGCATAAGGTGGAACTTTCAGTGTGAGGGGGTCA  275

seq1  ATAGGGAGAGAGTGAGAACCCGGAGAAAGCGTCTTTTCAGACAGAGATCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAGAGAGTGAGAACCCGGAGAAAGCGTCTTTTCAGACAGAGATCA  325

seq1  TGTTTCAGAAGTAAAAATAGCAAAACAAGAATAGAAAAATATAATAGCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGAAGTAAAAATAGCAAAACAAGAATAGAAAAATATAATAGCTA  375

seq1  TAGAGTTTCTGATTTCTAAGTCCAGGGGCTTTTGCAGAAACCACTTTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTTCTGATTTCTAAGTCCAGGGGCTTTTGCAGAAACCACTTTGAA  425

seq1  AGAGGGATCTCACTTGAAGCTAGCCCTTAGCCATCTTATTCCCCACCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGATCTCACTTGAAGCTAGCCCTTAGCCATCTTATTCCCCACCCCC  475

seq1  ATCAGTGCAGCCTTGTGAGACAGAGAACCGCTGGCTCGAAGGGCAGAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGCAGCCTTGTGAGACAGAGAACCGCTGGCTCGAAGGGCAGAGCT  525

seq1  GCCAAGCAGACATGTTAAGAGGCGAGGACCACATGGAGACTGAGCAAATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCAGACATGTTAAGAGGCGAGGACCACATGGAGACTGAGCAAATG  575

seq1  GGCTGGAGATGGAATGTTGGATAGCACTAGCTTAGAGCTAGGAGCAGAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGATGGAATGTTGGATAGCACTAGCTTAGAGCTAGGAGCAGAAG  625

seq1  GGAGAGGGGTGATAGGAACCTTTAGAGACAAATGGAACAATAGGGGATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGGTGATAGGAACCTTTAGAGACAAATGGAACAATAGGGGATCT  675

seq1  AGCGGCAATACCTGCTGCTTAATATAGGTCTTTTACAAAGGAATTGGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCAATACCTGCTGCTTAATATAGGTCTTTTACAAAGGAATTGGGAT  725

seq1  TTTTTTAGTATTCAGTGAAACCCAAGATGCTGGACAGTCGTCTGGGCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGTATTCAGTGAAACCCAAGATGCTGGACAGTCGTCTGGGCACT  775

seq1  GAAGCGAGGGAATTTAAGGGAATTTTGCACTTATGTCGAGAATATGTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGAGGGAATTTAAGGGAATTTTGCACTTATGTCGAGAATATGTGAG  825

seq1  AGTACAGAGGTGTGGCTGAGCTGTACTGTGCCCTGGAGTAAACTAGTACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGAGGTGTGGCTGAGCTGTACTGTGCCCTGGAGTAAACTAGTACT  875

seq1  TGCAGAACAAACCTCTGCTGCCTCTAGTTAAAATATAATGAATGCTGGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACAAACCTCTGCTGCCTCTAGTTAAAATATAATGAATGCTGGGG  925

seq1  CTGTTTGTACGATTTCAGAGAGGAATTTAATTTAGTTTCATCAATACACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTACGATTTCAGAGAGGAATTTAATTTAGTTTCATCAATACACT  975

seq1  CGAGTGGATTTAAAATCCTTATTGTTCCTTGAAAAAAAGCACTGAAAACC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGGATTTAAAATCCTTATTGTTCCTTGAAAAAAAGCACTGAAAACC  1025

seq1  AAAACAATGGTGTCCATTCAGTTGAAAAACTGTGTGTAACCCTGGGCTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATGGTGTCCATTCAGTTGAAAAACTGTGTGTAACCCTGGGCTTC  1075

seq1  ATAGATCTACTGAGTGCTATTAAGGGAAATTAACCTCTGAGGAAGACAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCTACTGAGTGCTATTAAGGGAAATTAACCTCTGAGGAAGACAGA  1125

seq1  GAATTC  1155
      ||||||
seq2  GAATTC  1131