BAC Information

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BAC

Clone NameB6Ng01-155D09
Chromosome16 (Build37)
Map Location 31,112,024 - 31,242,409
singlet/doubletdoublet
Overlap geneCentb2
Upstream geneEG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122, AI480653
Downstream genePpp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D09.bB6Ng01-155D09.g
ACCDH950056DH950057
length3241,083
definitionDH950056|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D09, 5' end.DH950057|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,242,086 - 31,242,409)(31,112,024 - 31,113,119)
sequence
agcagtcaaagcaaggtgtccaaagggagtctgagaaaaaaacaggtctt
gggttcacattctcctatttaacagtgtgtacaaaactcctgaatttccc
cagtcaacaatgctgacccaaggaaaatggctccctgtcctcgtgctaca
gagcaactgcctgatgctctcccttaaccctaccacctacaacctcaggt
aaaccgccagttcctcttaaagtctcacccgagagcccatcgagatggcc
cgtcaataaagatgcctccgtatgcacactccggcatgtgcctatagaga
caggggtttggggggagggtggga
gaattcccaaggcgtgggaggagagaaaggagagcacccacttagagaac
acagccttgtgtgggccactgagtcctacacagggtcagaaaggtgcctg
cgtgggacacacgagttgattccagacacaaaaacaatggcagtaatgga
ttatgacatattgaataagagaaaagcacataggaacacagctaaaaata
tgtcacaaattcaaattcaactgggcaaggaacagaatatttacaatttc
aaagtacaccccctcccccccgaaatacttattccccacaggttagagga
gcacctcacaacggaaagatgggacagataaaactacgtgccacttcaaa
gggtggcctgagaacacagtagttacacaaaatgttcttcccaaatatgt
aaaacccagctaaataactagtctgtgattttcaaaccttttgaagtcaa
aggtcagactaagcctgaagccctaactaccctgaccgagggagacatga
cgaccacagcagtttcgcagtaactgcaaaatgtaaagagcattcccggg
gcaatctttaaacacaaggcatttggggtttgaacagtggagacatatca
aggaccatgtctccactgtgaagtcggtcccatgactatgcaagagagag
ctagctcatcctaggctcatggaaagtgctcattaaagtaggaactggag
gctgacaacttactctcaagcagtgcaaggggaagaacttagctgtattg
tatgcagaaatttacagatatttgaggtttcaatttttaaaaaatatatc
tggttatcagaagatgtttgaacatcttgttaaagttaacaaacagaatt
atcatctatggaaaagatctcagtactttaaggcagaaatcatattcatt
cccaatgtctttgaaatgctaatggttttgttcccaataagaaaggctga
gagctaaaaaggcaaggacatcccagggtctctccccaccccaggtcagt
aggactatctccacacatactaaatgatgaaactctttctctagagtaat
gacagtcaatagatgggattcagctgaaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31242086_31242409
seq2: B6Ng01-155D09.b_52_375 (reverse)

seq1  TCCCACCCTCCCCCCAAACCCCTGTCTCTATAGGCACATGCCGGAGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCTCCCCCCAAACCCCTGTCTCTATAGGCACATGCCGGAGTGTG  50

seq1  CATACGGAGGCATCTTTATTGACGGGCCATCTCGATGGGCTCTCGGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGGAGGCATCTTTATTGACGGGCCATCTCGATGGGCTCTCGGGTGA  100

seq1  GACTTTAAGAGGAACTGGCGGTTTACCTGAGGTTGTAGGTGGTAGGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAAGAGGAACTGGCGGTTTACCTGAGGTTGTAGGTGGTAGGGTTA  150

seq1  AGGGAGAGCATCAGGCAGTTGCTCTGTAGCACGAGGACAGGGAGCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCATCAGGCAGTTGCTCTGTAGCACGAGGACAGGGAGCCATTT  200

seq1  TCCTTGGGTCAGCATTGTTGACTGGGGAAATTCAGGAGTTTTGTACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGGTCAGCATTGTTGACTGGGGAAATTCAGGAGTTTTGTACACAC  250

seq1  TGTTAAATAGGAGAATGTGAACCCAAGACCTGTTTTTTTCTCAGACTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATAGGAGAATGTGAACCCAAGACCTGTTTTTTTCTCAGACTCCC  300

seq1  TTTGGACACCTTGCTTTGACTGCT  324
      ||||||||||||||||||||||||
seq2  TTTGGACACCTTGCTTTGACTGCT  324

seq1: chr16_31112024_31113119
seq2: B6Ng01-155D09.g_68_1150

seq1  GAATTCCCAAGGCGTGGGAGGAGAGAAAGGAGAGCACCCACTTAGAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGGCGTGGGAGGAGAGAAAGGAGAGCACCCACTTAGAGAAC  50

seq1  ACAGCCTTGTGTGGGCCACTGAGTCCTACACAGGGTCAGAAAGGTGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTGTGTGGGCCACTGAGTCCTACACAGGGTCAGAAAGGTGCCTG  100

seq1  CGTGGGACACACGAGTTGATTCCAGACACAAAAACAATGGCAGTAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGACACACGAGTTGATTCCAGACACAAAAACAATGGCAGTAATGGA  150

seq1  TTATGACATATTGAATAAGAGAAAAGCACATAGGAACACAGCTAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACATATTGAATAAGAGAAAAGCACATAGGAACACAGCTAAAAATA  200

seq1  TGTCACAAATTCAAATTCAACTGGGCAAGGAACAGAATATTTACAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAATTCAAATTCAACTGGGCAAGGAACAGAATATTTACAATTTC  250

seq1  AAAGTACACCCCCTCCCCCCCGAAATACTTATTCCCCACAGGTTAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACACCCCCTCCCCCCCGAAATACTTATTCCCCACAGGTTAGAGGA  300

seq1  GCACCTCACAACGGAAAGATGGGACAGATAAAACTACGTGCCACTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCACAACGGAAAGATGGGACAGATAAAACTACGTGCCACTTCAAA  350

seq1  GGGTGGCCTGAGAACACAGTAGTTACACAAAATGTTCTTCCCAAATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCCTGAGAACACAGTAGTTACACAAAATGTTCTTCCCAAATATGT  400

seq1  AAAACCCAGCTAAATAACTAGTCTGTGATTTTCAAACCTTTTGAAGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAGCTAAATAACTAGTCTGTGATTTTCAAACCTTTTGAAGTCAA  450

seq1  AGGTCAGACTAAGCCTGAAGCCCTAACTACCCTGACCGAGGGAGACATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGACTAAGCCTGAAGCCCTAACTACCCTGACCGAGGGAGACATGA  500

seq1  CGACCACAGCAGTTTCGCAGTAACTGCAAAATGTAAAGAGCATTCCCGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCACAGCAGTTTCGCAGTAACTGCAAAATGTAAAGAGCATTCCCGGG  550

seq1  GCAATCTTTAAACACAAGGCATTTGGGGTTTGAACAGTGGAGACATATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTTTAAACACAAGGCATTTGGGGTTTGAACAGTGGAGACATATCA  600

seq1  AGGACCATGTCTCCACTGTGAAGTCGGTCCCATGACTATGCAAGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCATGTCTCCACTGTGAAGTCGGTCCCATGACTATGCAAGAGAGAG  650

seq1  CTAGCTCATCCTAGGCTCATGGAAAGTGCTCATTAAAGTAGGAACTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCATCCTAGGCTCATGGAAAGTGCTCATTAAAGTAGGAACTGGAG  700

seq1  GCTGACAACTTACTCTCAAGCAGTGCAAGGGGAAGAACTTAGCTGTATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAACTTACTCTCAAGCAGTGCAAGGGGAAGAACTTAGCTGTATTG  750

seq1  TATGCAGAAATTTACAGATATTTGAGGTTTCAAATTTTTAAAAAATATAT  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATGCAGAAATTTACAGATATTTGAGGTTTC-AATTTTTAAAAAATATAT  799

seq1  CTGGTTATCAGAAGATGTTTGAACATCTTGTTAAAGTTAACAAACAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTATCAGAAGATGTTTGAACATCTTGTTAAAGTTAACAAACAGAAT  849

seq1  TATCATCTATGGAAAAGATCTCAGTAC-TTAAGGCAGAAATCATATTCAT  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATCATCTATGGAAAAGATCTCAGTACTTTAAGGCAGAAATCATATTCAT  899

seq1  TCCCAATGTCTTTGAAATGCTAATGGTTTTGTTCCCAATAAGAAAGGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGTCTTTGAAATGCTAATGGTTTTGTTCCCAATAAGAAAGGCTG  949

seq1  AGAGCTAAAAAGGCAGGGACATCCCAGGGTTCTCTCCCCAACCCCAGGCC  999
      ||||||||||||||| ||||||||||||| ||||||||| |||||||| |
seq2  AGAGCTAAAAAGGCAAGGACATCCCAGGG-TCTCTCCCC-ACCCCAGGTC  997

seq1  AGTAAGGGACTATCTCCACACATAACTAAAAATGAATGGAAACTCTTTCT  1049
      ||||  ||||||||||||||||| |||  ||||||   ||||||||||||
seq2  AGTA--GGACTATCTCCACACAT-ACT--AAATGA--TGAAACTCTTTCT  1040

seq1  CTAAAGGAGTAAATGACAGTCCATAGATGGGGATCAGCTGAGAAATC  1096
      |||   |||| |||||||||| |||||||||  |||||||| |||||
seq2  CTA---GAGT-AATGACAGTCAATAGATGGGATTCAGCTGAAAAATC  1083