BAC Information

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BAC

Clone NameB6Ng01-156B11
Chromosome16 (Build37)
Map Location 12,426,299 - 12,619,712
singlet/doubletdoublet
Overlap genenone
Upstream gene4933437K13Rik, LOC100043171, C530044N13Rik, 2700045P11Rik
Downstream geneEG622509, LOC622553, Ercc4, Gt4-1, Mkl2, Parn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156B11.bB6Ng01-156B11.g
ACCDH950688DH950689
length1,045764
definitionDH950688|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B11, 5' end.DH950689|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,618,661 - 12,619,712)(12,426,299 - 12,427,061)
sequence
gaattctgttcttgcctccactagacattcttccatttggatttcccgtg
agttactgctggaccctggaacactagccttcctccacatatcttcctgt
ggacataacagaagggcatgttggcactacagttggacagattgaggctc
tgcagtcactgatgatgtgaccttgaaattctcttggctcccttagactt
aatgttctccatttaaaatgtaaatgtgaagccctctcctccagaaaact
gttgagagaagaacagggcgaggaaacagtcaggctgggactgtagccag
gtgttagagtacttgcctagtctaagtgaagccctgggttctaaactcag
cacagcataaactgggtgtggtggcccatgcctataattccagcaccctg
gaggaggtagagggggatgaggtcatgcttaattatagaggttcccttgg
gttacaagagacctagtcttaataaaaacaactggaggaaatgaagaaac
caagaagacgagacaaatgatgttagatgtgacaggatgtggtgtcaact
acaagcctcaggagatggggagaaggcagttctgacacccaatggaaagc
agatgtttggagaggttgcaggttccaggtcaatcttcagcaggaggaca
gacacatccatggtgagttggcttggagggagcttgtggaccaaagagaa
actctcactgtcatctttgcctctgtcttccagtggtacctcctactcac
tggatccatccaagaagatctagacagtcaatacaggtgaagatcccagc
accagacttgattgtccggtggaggccagtgggaggcaggaagctcaagt
tacacacagcaggatgcacgtgaatgctgtgtcacactgcttggcgggtg
ccatgtgcttaataaatattggccctgcttatttattcacacgaagggaa
ttggagatcttgcaatggtgattcatttccattcaaacttggcaatcaat
tttaagaaacttggaacaagggtgctcctgctcctagtgttatgg
gaattcaaagtagaaagactcataaaggcatcaagtaagaagctggagag
atgtatcagcacttaagatcatttgctgctctagaaggggacccaacaca
tacatgctcacacacacacatgcacacacacagacacacacagacacaca
cacacagacagacagacagacacacacacacacagacagacagacacaca
cacacagacacacacacacacacacacacacacacagacacacacacaca
cacacacacagacacacacacacaccaccccagtggctcacaacctccta
tacctcgagctccacagttctggatgcccttgtctgcctctgtgggcatg
tgacatgctcatagagacattcattacaaatcctaaaatggcagttacta
ggataggaactcagtggggaggaaattgcagagctctttgttttgcatca
agtttcagtcataaaatgactggattctggagatctgttgcttagcattg
tgcctgcaattaattatgctgtttggtacttttacagaaccacgagggag
taaaccttacagtaatcttccttaccacaactgcttgttcttggcaccat
ggcctacaattcaaattccaaacttgcttggttgtcttgaaatagtatat
gaatacaccaatgtcaaatagaacatttacagtcacaggttgtaatgaag
aaagcaggagttgaaattatagagatttgccactcatttcttttttttgg
ggggggggggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12618661_12619712
seq2: B6Ng01-156B11.b_47_1091 (reverse)

seq1  CCATAAACACTGAGAGCAGGAGCCACCTTGGTCCAAGTTTTCTATAAAAT  50
      |||| ||||||  ||||||||||  ||||| |||||| ||||| ||||||
seq2  CCAT-AACACTAGGAGCAGGAGCACCCTTGTTCCAAG-TTTCT-TAAAAT  47

seq1  TGAATGCCAAGTTTGAAATGGAAATGAATCACCAATTGCAAGATTCTCCA  100
      ||| ||||||||||| ||||||||||||||||| ||||||||| ||||||
seq2  TGATTGCCAAGTTTG-AATGGAAATGAATCACC-ATTGCAAGA-TCTCCA  94

seq1  ATTCCCTTCGTGTTGATTAAATAAGCAGGGCCAATATTTATTAAGCACAT  150
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  ATTCCCTTCGTG-TGAATAAATAAGCAGGGCCAATATTTATTAAGCACAT  143

seq1  GGCACCCGCCAAGCAGTGTGACACAGCATTCACGTGCATCCTGCTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCGCCAAGCAGTGTGACACAGCATTCACGTGCATCCTGCTGTGTG  193

seq1  TAACTTGAGCTTCCTGCCT-CCACTGGCCCTCCACCGGACAATCAAGTCT  249
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  TAACTTGAGCTTCCTGCCTCCCACTGG-CCTCCACCGGACAATCAAGTCT  242

seq1  GGTGCTGGGATCTTCACCTGTATTGACTGTCTAGATCTTCTTGGATGGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGATCTTCACCTGTATTGACTGTCTAGATCTTCTTGGATGGAT  292

seq1  CCAGTGAGTAGGAGGTACCACTGGAAGACAGAGGCAAAGATGACAGTGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGTAGGAGGTACCACTGGAAGACAGAGGCAAAGATGACAGTGAG  342

seq1  AGTTTCTCTTTGGTCCACAAGCTCCCTCCAAGCCAACTCACCATGGATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCTTTGGTCCACAAGCTCCCTCCAAGCCAACTCACCATGGATGT  392

seq1  GTCTGTCCTCCTGCTGAAGATTGACCTGGAACCTGCAACCTCTCCAAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCCTCCTGCTGAAGATTGACCTGGAACCTGCAACCTCTCCAAACA  442

seq1  TCTGCTTTCCATTGGGTGTCAGAACTGCCTTCTCCCCATCTCCTGAGGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTCCATTGGGTGTCAGAACTGCCTTCTCCCCATCTCCTGAGGCT  492

seq1  TGTAGTTGACACCACATCCTGTCACATCTAACATCATTTGTCTCGTCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTGACACCACATCCTGTCACATCTAACATCATTTGTCTCGTCTTC  542

seq1  TTGGTTTCTTCATTTCCTCCAGTTGTTTTTATTAAGACTAGGTCTCTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTTCATTTCCTCCAGTTGTTTTTATTAAGACTAGGTCTCTTGT  592

seq1  AACCCAAGGGAACCTCTATAATTAAGCATGACCTCATCCCCCTCTACCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGGGAACCTCTATAATTAAGCATGACCTCATCCCCCTCTACCTC  642

seq1  CTCCAGGGTGCTGGAATTATAGGCATGGGCCACCACACCCAGTTTATGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGTGCTGGAATTATAGGCATGGGCCACCACACCCAGTTTATGCT  692

seq1  GTGCTGAGTTTAGAACCCAGGGCTTCACTTAGACTAGGCAAGTACTCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAGTTTAGAACCCAGGGCTTCACTTAGACTAGGCAAGTACTCTAA  742

seq1  CACCTGGCTACAGTCCCAGCCTGACTGTTTCCTCGCCCTGTTCTTCTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCTACAGTCCCAGCCTGACTGTTTCCTCGCCCTGTTCTTCTCTC  792

seq1  AACAGTTTTCTGGAGGAGAGGGCTTCACATTTACATTTTAAATGGAGAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTGGAGGAGAGGGCTTCACATTTACATTTTAAATGGAGAAC  842

seq1  ATTAAGTCTAAGGGAGCCAAGAGAATTTCAAGGTCACATCATCAGTGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTCTAAGGGAGCCAAGAGAATTTCAAGGTCACATCATCAGTGACT  892

seq1  GCAGAGCCTCAATCTGTCCAACTGTAGTGCCAACATGCCCTTCTGTTATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCTCAATCTGTCCAACTGTAGTGCCAACATGCCCTTCTGTTATG  942

seq1  TCCACAGGAAGATATGTGGAGGAAGGCTAGTGTTCCAGGGTCCAGCAGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGGAAGATATGTGGAGGAAGGCTAGTGTTCCAGGGTCCAGCAGTA  992

seq1  ACTCACGGGAAATCCAAATGGAAGAATGTCTAGTGGAGGCAAGAACAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGGGAAATCCAAATGGAAGAATGTCTAGTGGAGGCAAGAACAGAA  1042

seq1  TTC  1052
      |||
seq2  TTC  1045

seq1: chr16_12426299_12427061
seq2: B6Ng01-156B11.g_69_832

seq1  GAATTCAAAGTAGAAAGACTCATAAAGGCATCAAGTAAGAAGCTGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTAGAAAGACTCATAAAGGCATCAAGTAAGAAGCTGGAGAG  50

seq1  ATGTATCAGCACTTAAGATCATTTGCTGCTCTAGAAGGGGACCCAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAGCACTTAAGATCATTTGCTGCTCTAGAAGGGGACCCAACACA  100

seq1  TACATGCTCACACACACACATGCACACACACAGACACACACAGACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCTCACACACACACATGCACACACACAGACACACACAGACACACA  150

seq1  CACACAGACAGACAGACAGACACACACACACACAGACAGACAGACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACAGACAGACAGACACACACACACACAGACAGACAGACACACA  200

seq1  CACACAGACACACACACACACACACACACACACACAGACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACACACACACACACACACACACACACACAGACACACACACACA  250

seq1  CACACACACAGACACACACACACACCACCCCAGTGGCTCACAACCTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAGACACACACACACACCACCCCAGTGGCTCACAACCTCCTA  300

seq1  TACCTCGAGCTCCACAGTTCTGGATGCCCTTGTCTGCCTCTGTGGGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCGAGCTCCACAGTTCTGGATGCCCTTGTCTGCCTCTGTGGGCATG  350

seq1  TGACATGCTCATAGAGACATTCATTACAAATCCTAAAATGGCAGTTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCTCATAGAGACATTCATTACAAATCCTAAAATGGCAGTTACTA  400

seq1  GGATAGGAACTCAGTGGGGAGGAAATTGCAGAGCTCTTTGTTTTGCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGAACTCAGTGGGGAGGAAATTGCAGAGCTCTTTGTTTTGCATCA  450

seq1  AGTTTCAGTCATAAAATGACTGGATTCTGGAGATCTGTTGCTTAGCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGTCATAAAATGACTGGATTCTGGAGATCTGTTGCTTAGCATTG  500

seq1  TGCCTGCAATTAATTATGCTGTTTGGTACTTTTACAGAACCACGAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCAATTAATTATGCTGTTTGGTACTTTTACAGAACCACGAGGGAG  550

seq1  TAAACCTTACAGTAATCTTCCTTACCACAACTGCTTGTTCTTGGCACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTACAGTAATCTTCCTTACCACAACTGCTTGTTCTTGGCACCAT  600

seq1  GGCCTACAATTCAAATTCCAAACTTGCTTGGTTGTCTTGAAATAGTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTACAATTCAAATTCCAAACTTGCTTGGTTGTCTTGAAATAGTATAT  650

seq1  GAATACACCAATGTCAAATAGAACATTTACAGTCACAGGTTGTAATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACACCAATGTCAAATAGAACATTTACAGTCACAGGTTGTAATGAAG  700

seq1  AAAGCAGGAGTTG-AATTATAGAGATTTGCCACTCATTTCTTTTTTTTGG  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGAGTTGAAATTATAGAGATTTGCCACTCATTTCTTTTTTTTGG  750

seq1  GGGGGGGGGGGGAA  763
      ||||||||||||||
seq2  GGGGGGGGGGGGAA  764