BAC Information

Click to search

BAC

Clone NameB6Ng01-156I24
Chromosome16 (Build37)
Map Location 60,082,802 - 60,274,852
singlet/doubletdoublet
Overlap geneEpha6
Upstream geneOlfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170, LOC100043524
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156I24.bB6Ng01-156I24.g
ACCDH951034DH951035
length3471,085
definitionDH951034|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I24, 5' end.DH951035|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,274,506 - 60,274,852)(60,082,802 - 60,083,887)
sequence
aaaccagaaaatactcgaaagtgagcttcaaattcctgactgaaattgaa
attggttacagatatcctatgctaatttttgtttgttttttttttgattt
ttgttttgttgttgttgttgttgttgttgttgttgttgttttgttttttt
tcgagaaagggtttctctgtatagccctggctgtcctggaactcactttg
tagaccaggctggcctcaaactcataaatctgcctgcctctgtgtcccaa
gtgctgggattaaaggtgtgtgccaccaccgcccggctatcctatggtaa
tttgccagtgggatgatgtctttattatatcaatttcctgtttataa
gaattcctctcgtgtgatgaggcttccttgaaaggcagataaataaatag
tatttaaaaaattcaaatctgaaggtaggctttcttgattctagattctg
ttttaccagcacagctcttggcaattcagttacaattttagttaattttc
acgtttaagacttggacttctttgatcttccaaagagtaagttgttgacc
atcatttagctagataatctctatataaagtgactggttcttggaatatt
ttaaacagatttaaattactgggtatttttctcgatattgtgttgcatag
tctcagaaaatttatatatgttcataatggaagtttttatattttgtttt
ttagttagctcacatattaataacatgtccactaaaatttattttctctg
tttcacttagtagctatcagttagctaaaagttttgtgttataggagagg
tggtatacacctattggtttatattaaaaatagttttagagatgtagatt
tcctgtgccaagttaaaagtgacctcccttaatattaactacaaagagga
aaatgtcacagtcttgaaacaattgaataaattgaagagtcaaacatcta
tatgaagaagtaacttttccatcatgattataaatatgattctaaaatta
ttctaatgcatcttggctggcaatctttgaagatgtggcattatgaagca
gatgttgcttaatgactacagaatggaaattaaatttttacaattgcaat
aaatgtgtacatggataatttaaaattatttctttattatgtcttcttaa
attatacttttaaatactctgtgactagagtattaagttttcagatttgc
ttcactcaatacttgaactatatcaggaaatactgtttttatttagtggt
aaatgattaaagtgcatctcatggctgtctcatgtacaccctcatgatgt
gtctcgtgcagctcatgtttctcaaactgtttttttttttggtgtgagaa
ggccccttgtatgagcttaaaagtcctatgaaattagaatcatagacttc
tttctgtgatgttaccagaccaggagaaaatcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60274506_60274852
seq2: B6Ng01-156I24.b_54_400 (reverse)

seq1  TTATAAACTGGAAATTGATATAATAAAGACCTCATCCCACTGGCAAATTA  50
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TTATAAACAGGAAATTGATATAATAAAGACATCATCCCACTGGCAAATTA  50

seq1  CCATAGGATAGCCGGGCGGTGGTGGCACACACCTTTAATCCCAGCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGATAGCCGGGCGGTGGTGGCACACACCTTTAATCCCAGCACTTG  100

seq1  GGACACAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAA  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGACACAGAGGCAGGCAGATTTATGAGTTTGAGGCCAGCCTGGTCTACAA  150

seq1  AGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTTTCTCGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTTTCTCGAAAA  200

seq1  AAAACAAAACAACAACAACAACAACAACAACAACAACAACAAAACAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAACAACAACAACAACAACAACAACAACAACAAAACAAAAA  250

seq1  TCAAAAAAAAAACAAACAAAAATTAGCATAGGATATCTGTAACCAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAAAACAAACAAAAATTAGCATAGGATATCTGTAACCAATTTC  300

seq1  AATTTCAGTCAGGAATTTGAAGCTCACTTTCGAGTATTTTCTGGTTT  347
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTCAGGAATTTGAAGCTCACTTTCGAGTATTTTCTGGTTT  347

seq1: chr16_60082802_60083887
seq2: B6Ng01-156I24.g_68_1152

seq1  GAATTCCTCTCGTGTGATGAGGCTTCCTTGAAAGGCAGATAAATAAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCGTGTGATGAGGCTTCCTTGAAAGGCAGATAAATAAATAG  50

seq1  TATTTAAAAAATTCAAATCTGAAGGTAGGCTTTCTTGATTCTAGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAAATTCAAATCTGAAGGTAGGCTTTCTTGATTCTAGATTCTG  100

seq1  TTTTACCAGCACAGCTCTTGGCAATTCAGTTACAATTTTAGTTAATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCAGCACAGCTCTTGGCAATTCAGTTACAATTTTAGTTAATTTTC  150

seq1  ACGTTTAAGACTTGGACTTCTTTGATCTTCCAAAGAGTAAGTTGTTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTAAGACTTGGACTTCTTTGATCTTCCAAAGAGTAAGTTGTTGACC  200

seq1  ATCATTTAGCTAGATAATCTCTATATAAAGTGACTGGTTCTTGGAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAGCTAGATAATCTCTATATAAAGTGACTGGTTCTTGGAATATT  250

seq1  TTAAACAGATTTAAATTACTGGGTATTTTTCTCGATATTGTGTTGCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGATTTAAATTACTGGGTATTTTTCTCGATATTGTGTTGCATAG  300

seq1  TCTCAGAAAATTTATATATGTTCATAATGGAAGTTTTTATATTTTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAAATTTATATATGTTCATAATGGAAGTTTTTATATTTTGTTTT  350

seq1  TTAGTTAGCTCACATATTAATAACATGTCCACTAAAATTTATTTTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGCTCACATATTAATAACATGTCCACTAAAATTTATTTTCTCTG  400

seq1  TTTCACTTAGTAGCTATCAGTTAGCTAAAAGTTTTGTGTTATAGGAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTAGTAGCTATCAGTTAGCTAAAAGTTTTGTGTTATAGGAGAGG  450

seq1  TGGTATACACCTATTGGTTTATATTAAAAATAGTTTTAGAGATGTAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATACACCTATTGGTTTATATTAAAAATAGTTTTAGAGATGTAGATT  500

seq1  TCCTGTGCCAAGTTAAAAGTGACCTCCCTTAATATTAACTACAAAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCCAAGTTAAAAGTGACCTCCCTTAATATTAACTACAAAGAGGA  550

seq1  AAATGTCACAGTCTTGAAACAATTGAATAAATTGAAGAGTCAAACATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCACAGTCTTGAAACAATTGAATAAATTGAAGAGTCAAACATCTA  600

seq1  TATGAAGAAGTAACTTTTCCATCATGATTATAAATATGATTCTAAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAGTAACTTTTCCATCATGATTATAAATATGATTCTAAAATTA  650

seq1  TTCTAATGCATCTTGGCTGGCAATCTTTGAAGATGTGGCATTATGAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGCATCTTGGCTGGCAATCTTTGAAGATGTGGCATTATGAAGCA  700

seq1  GATGTTGCTTAATGACTACAGAATGGAAATTAAATTTTTACAATTGCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGCTTAATGACTACAGAATGGAAATTAAATTTTTACAATTGCAAT  750

seq1  AAATGTGTACATGGATAATTTAAAATTATTTCTTTATTATGTCTTCTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTACATGGATAATTTAAAATTATTTCTTTATTATGTCTTCTTAA  800

seq1  ATTATACTTTTAAATACTCTGTGACTAGAGTATTAAGTTTTCAGATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTTTTAAATACTCTGTGACTAGAGTATTAAGTTTTCAGATTTGC  850

seq1  TTCACTCAATACTTGAACTATATCAGGAAATACTGTTTTTATTTAGTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAATACTTGAACTATATCAGGAAATACTGTTTTTATTTAGTGGT  900

seq1  AAATGATTAAAGTGCATCTCATGGCTGTCTCATGTACACCCTCATGATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTAAAGTGCATCTCATGGCTGTCTCATGTACACCCTCATGATGT  950

seq1  GTCTCGTTGCAGGCTCATGTATCTCAAACTGTTTTTATTTT--GTGTGAG  998
      |||||| |||| |||||||| ||||||||||||||| ||||  |||||||
seq2  GTCTCG-TGCA-GCTCATGTTTCTCAAACTGTTTTTTTTTTTGGTGTGAG  998

seq1  -ATGCCACTTGTATGAGCTTAAAAGTCCTATGACATAAGATCCATAGACT  1047
       | ||| |||||||||||||||||||||||||| || |||  ||||||||
seq2  AAGGCCCCTTGTATGAGCTTAAAAGTCCTATGAAATTAGAATCATAGACT  1048

seq1  TCCTTTCTGTGATGTTACCAGACACAGTAGAAAATCACC  1086
      | ||||||||||||||||||||| ||| |||||||||||
seq2  T-CTTTCTGTGATGTTACCAGAC-CAGGAGAAAATCACC  1085