BAC Information

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BAC

Clone NameB6Ng01-158B07
Chromosome16 (Build37)
Map Location 93,390,150 - 93,491,066
singlet/doubletdoublet
Overlap genenone
Upstream geneDscr1, 2410124H12Rik, Clic6, Runx1, EG666023, LOC100040747
Downstream geneSetd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2, Hlcs, LOC622832
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158B07.bB6Ng01-158B07.g
ACCDH952137DH952138
length1,087795
definitionDH952137|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B07, 5' end.DH952138|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,489,979 - 93,491,066)(93,390,150 - 93,390,933)
sequence
gaattcctctctctctccagatatcccgtcttctaaatatgcttcaattt
attggctgtcagatttttattgacaggtgatgcttccacacaatactgaa
gagattgtcccgacaagtaatagactcagagaggaaatgtcttgctacaa
agatgctatagagatgtttcaatgttttatctttttgaaattttatttac
aaatacatatgtacatattcctggggtatcaagggatgttttgatatgtg
tgtgtatgtgctatgtcatgttcagtacaggacacacacatatgatttga
tatgtgttatatcatgttcaatacagaacacacacgcatgttttgatgtc
ttcatatgcattctgtcatgtgcagatcagtatacacaggtgtatttttt
acacatcaatcattccctcgaggtgagtgtatcttcctctgcagtcaccc
cacactgtggtccatcaccagaacttaactggtccatctcagtgtaattt
gactggcttctttctccccctccctcatctgctctcctcagcctctggtc
accactgttcaatttccgacaaaatccactcttttggatcccacatgtga
caggatccctcagtgtttgtctctgtgtgcctggattattttcttcggca
caaagtcctccgggtccgtccatgttgtgacaaacgatgagaatcaccca
ttccttaaggctgaagaacatttaagtttgtacacacaccatgttttctt
catccgctggctgttcatctccagcttttggctgttgtgaatagtgccac
aaagaaaatgagctcacagaggacttacggtgaaccgaatccatttctga
cagcagctgcttgattgtaacgtacttcttacttagaagttttggcagac
ttgccacattgtttccgtgatggccgtgtaaatcacagtgtgcgcagcat
cagtggtcggctccgttcttcaccgtgtgcgcagcatcagtgggtggctc
cgttcttcacccgtgtgcgcagcatcagtggacgcttccgttctctcacc
gtgtgcgcagcatcatggacggctttgttttccacgg
gaattctcatgctgagctctgcatctccctggatgtccacagagcatcct
gagataggaaccagtggaaaatagggtttgggatttgggaatttggtcgt
gggtgtactattctttcagaaacctggtaagcctgtacttgctgctttaa
gaatcttgccaccgtgtgaatacaccagctaatgggcagtggggcagctt
tgtcaaagccaccccatagctaggcggatgtgagttttggtggggctttc
tgatagctttctggaagctagcaggcttagtcctcaaatacagattgctg
gtaacttccagtgcagcagcaagggcagaaacatgtgtctgcactgaaca
tggtggggaaggcagagccaggagccaacggaagcatttcagggttagat
atccatggagatgggccagggtcctgactaagactgtttggtgagctttt
ggtgaactcaaggttctttacgtccccagtcggatcgcccactcatccca
gagtggtcttattttgcatcctgtcagcatgtccacatttggctaaagac
ttggcaccatataaatgtgggcttccgagctcaggggacgttagaattca
acgggaggtggagaggaagcttcctccaagactctctggagatggagtcg
gttgatggagatggaggaggccccttgagtgtgaaatttctgccactatt
gcaagttcaatctactaccttggctacagtccacaggcatgagtcttgtc
tctgatctctgatgcagacatttctggctgtgggtaaaataaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_93489979_93491066
seq2: B6Ng01-158B07.b_47_1133 (reverse)

seq1  CCGTGGAGAACAGAGCCGTCCACTGATGCTGCGCACACCGTG-GAGAACG  49
      ||||||| |||| ||||||||| ||||||||||||||| ||| |||||||
seq2  CCGTGGAAAACAAAGCCGTCCA-TGATGCTGCGCACACGGTGAGAGAACG  49

seq1  GAGCCGTCCACTGATGCTGCGCACAC-GGTGAAGAACGGAGCCACCCACT  98
      ||  |||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAGCGTCCACTGATGCTGCGCACACGGGTGAAGAACGGAGCCACCCACT  99

seq1  GATGCTGCGCACACGGTGAAGAACGGAGCCGACCACTGATGCTGCGCACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCGCACACGGTGAAGAACGGAGCCGACCACTGATGCTGCGCACA  149

seq1  CTGTGATTTACACGGCCATCACGGAAAACAATGTGGCAAGTCTGCCAAAA  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGTGATTTACACGGCCATCACGG-AAACAATGTGGCAAGTCTGCCAAAA  198

seq1  CTTCTAAGTAAGAAGTACGTTACAATCAAGCAGCCTGCTGTCAGAAATGG  248
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTCTAAGTAAGAAGTACGTTACAATCAAGCAG-CTGCTGTCAGAAATGG  247

seq1  ATTCGGTTCACCGTAAGTCCTCTGTGAGCTCATTTTCTTTGTGGCACTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGTTCACCGTAAGTCCTCTGTGAGCTCATTTTCTTTGTGGCACTAT  297

seq1  TCACAACAGCCAAAAGCTGGAGATGAACAGCCAGCGGATGAAGAAAACAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACAGCCAAAAGCTGGAGATGAACAGCCAGCGGATGAAGAAAACAT  347

seq1  GGTGTGTGTACAAACTTAAATGTTCTTCAGCCTTAAGGAATGGGTGATTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGTACAAACTTAAATGTTCTTCAGCCTTAAGGAATGGGTGATTC  397

seq1  TCATCGTTTGTCACAACATGGACGGACCCGGAGGACTTTGTGCCGAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGTTTGTCACAACATGGACGGACCCGGAGGACTTTGTGCCGAAGAA  447

seq1  AATAATCCAGGCACACAGAGACAAACACTGAGGGATCCTGTCACATGTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCCAGGCACACAGAGACAAACACTGAGGGATCCTGTCACATGTGG  497

seq1  GATCCAAAAGAGTGGATTTTGTCGGAAATTGAACAGTGGTGACCAGAGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAAAGAGTGGATTTTGTCGGAAATTGAACAGTGGTGACCAGAGGC  547

seq1  TGAGGAGAGCAGATGAGGGAGGGGGAGAAAGAAGCCAGTCAAATTACACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAGCAGATGAGGGAGGGGGAGAAAGAAGCCAGTCAAATTACACT  597

seq1  GAGATGGACCAGTTAAGTTCTGGTGATGGACCACAGTGTGGGGTGACTGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGACCAGTTAAGTTCTGGTGATGGACCACAGTGTGGGGTGACTGC  647

seq1  AGAGGAAGATACACTCACCTCGAGGGAATGATTGATGTGTAAAAAATACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGATACACTCACCTCGAGGGAATGATTGATGTGTAAAAAATACA  697

seq1  CCTGTGTATACTGATCTGCACATGACAGAATGCATATGAAGACATCAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATACTGATCTGCACATGACAGAATGCATATGAAGACATCAAAA  747

seq1  CATGCGTGTGTGTTCTGTATTGAACATGATATAACACATATCAAATCATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTGTGTGTTCTGTATTGAACATGATATAACACATATCAAATCATA  797

seq1  TGTGTGTGTCCTGTACTGAACATGACATAGCACATACACACACATATCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCCTGTACTGAACATGACATAGCACATACACACACATATCAA  847

seq1  AACATCCCTTGATACCCCAGGAATATGTACATATGTATTTGTAAATAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCTTGATACCCCAGGAATATGTACATATGTATTTGTAAATAAAA  897

seq1  TTTCAAAAAGATAAAACATTGAAACATCTCTATAGCATCTTTGTAGCAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAAGATAAAACATTGAAACATCTCTATAGCATCTTTGTAGCAAG  947

seq1  ACATTTCCTCTCTGAGTCTATTACTTGTCGGGACAATCTCTTCAGTATTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTCTCTGAGTCTATTACTTGTCGGGACAATCTCTTCAGTATTG  997

seq1  TGTGGAAGCATCACCTGTCAATAAAAATCTGACAGCCAATAAATTGAAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGCATCACCTGTCAATAAAAATCTGACAGCCAATAAATTGAAGC  1047

seq1  ATATTTAGAAGACGGGATATCTGGAGAGAGAGAGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGAAGACGGGATATCTGGAGAGAGAGAGGAATTC  1087

seq1: chr16_93390150_93390933
seq2: B6Ng01-158B07.g_68_851

seq1  GAATTCTCATGCTGAGCTCTGCATCTCCCTGGATGTCCACAGAGCATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGCTGAGCTCTGCATCTCCCTGGATGTCCACAGAGCATCCT  50

seq1  GAGATAGGAACCAGTGGAAAATAGGGTTTGGGATTTGGGAATTTGGTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGGAACCAGTGGAAAATAGGGTTTGGGATTTGGGAATTTGGTCGT  100

seq1  GGGTGTACTATTCTTTCAGAAACCTGGTAAGCCTGTACTTGCTGCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTACTATTCTTTCAGAAACCTGGTAAGCCTGTACTTGCTGCTTTAA  150

seq1  GAATCTTGCCACCGTGTGAATACACCAGCTAATGGGCAGTGGGGCAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGCCACCGTGTGAATACACCAGCTAATGGGCAGTGGGGCAGCTT  200

seq1  TGTCAAAGCCACCCCATAGCTAGGCGGATGTGAGTTTTGGTGGGGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGCCACCCCATAGCTAGGCGGATGTGAGTTTTGGTGGGGCTTTC  250

seq1  TGATAGCTTTCTGGAAGCTAGCAGGCTTAGTCCTCAAATACAGATTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCTTTCTGGAAGCTAGCAGGCTTAGTCCTCAAATACAGATTGCTG  300

seq1  GTAACTTCCAGTGCAGCAGCAAGGGCAGAAACATGTGTCTGCACTGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTCCAGTGCAGCAGCAAGGGCAGAAACATGTGTCTGCACTGAACA  350

seq1  TGGTGGGGAAGGCAGAGCCAGGAGCCAACGGAAGCATTTCAGGGTTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGGAAGGCAGAGCCAGGAGCCAACGGAAGCATTTCAGGGTTAGAT  400

seq1  ATCCATGGAGATGGGCCAGGGTCCTGACTAAGACTGTTTGGTGAGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGGAGATGGGCCAGGGTCCTGACTAAGACTGTTTGGTGAGCTTTT  450

seq1  GGTGAACTCAAGGTTCTTTACGTCCCCAGTCGGATCGCCCACTCATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACTCAAGGTTCTTTACGTCCCCAGTCGGATCGCCCACTCATCCCA  500

seq1  GAGTGGTCTTATTTTGCATCCTGTCAGCATGTCCACATTTGGCTAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTCTTATTTTGCATCCTGTCAGCATGTCCACATTTGGCTAAAGAC  550

seq1  TTGGCACCATATAAATGTGGGCTTCCGAGCTCAGGGGACGTTAGAATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACCATATAAATGTGGGCTTCCGAGCTCAGGGGACGTTAGAATTCA  600

seq1  ACGGGAGGTGGAGAGGAAGCTTCCTCCAAGACTCTCTGGAGATGGAGTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAGGTGGAGAGGAAGCTTCCTCCAAGACTCTCTGGAGATGGAGTCG  650

seq1  GTTGATGGAGATGGAGGAGGCCCC-TGGGTGTGAAATTTCTGCCACCATT  699
      |||||||||||||||||||||||| || |||||||||||||||||| |||
seq2  GTTGATGGAGATGGAGGAGGCCCCTTGAGTGTGAAATTTCTGCCACTATT  700

seq1  GCGAGCTCACTCTACTACCAGTGGCTACAGGCCAAGGGCACTGAGTCTTG  749
      || || ||| |||||||||  ||||||||| |||  |||| |||||||||
seq2  GCAAGTTCAATCTACTACC-TTGGCTACAGTCCACAGGCA-TGAGTCTTG  748

seq1  TCTCTGATCTCTGATGCTGACATTT-TGGCTGTGGG  784
      ||||||||||||||||| ||||||| ||||||||||
seq2  TCTCTGATCTCTGATGCAGACATTTCTGGCTGTGGG  784