BAC Information

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BAC

Clone NameB6Ng01-158M08
Chromosome16 (Build37)
Map Location 29,848,138 - 29,896,890
singlet/doubletdoublet
Overlap genenone
Upstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4, Opa1
Downstream geneGm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158M08.bB6Ng01-158M08.g
ACCDH952633DH952634
length1,0861,051
definitionDH952633|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M08, 5' end.DH952634|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,848,138 - 29,849,238)(29,895,833 - 29,896,890)
sequence
gaattcttcttgacagacaacagtggtccttccactctgacacttcctca
tgctagtccaggctctttattcttagtaggcttctgacccaacatgttct
tatacaccagcctcgctgaattcttcatttaaaagatttttaaatttttt
ttttttacatttatttagtgtgtttgaatatcacacatgcaaaggttaaa
agacgactcagggcaaccagatctctctttctactatgtgggttcctgtt
gtcaggcttggtggaaagtgcccttacctgctgagccatcttgtgagtcc
ctgcttttgatttttttgacagtgtctctttatacagcccaggctagctt
aaaacccactatatagccaggctagcctgctcctgcctcgggttctgaag
tactgagattataggctttctttactgcaccaatatttgtgtcatttatt
tgtttgttttaaaaattgcattcgagtggcaagagctagcattcactatg
tgcctctgaagtcctacaagtgcgctatcaatctctctgcgcgctgggta
aggggaccatcccttccttacctcagggatggcaagagagtgagtggctc
attttagtgttcctacagtcttagctagcgatccccacaagcgcgaatca
ttccctaacttcctctggatggcgctgttccctccgcctacttttttttt
tttttcagcttatggtctccagctcacctttcccagtcggcacaccatct
tgtaagttcttgtttaaggtcctgcactttactgtcttagtgtgctaggg
attgtgggtacctgttcctctgacctctgctccgggacacttcaggttgg
ccgcaatcgcttcttgtactttctctgcatgcatgccatgcaatctcaca
taggatagtttaaaacgcttacctaccagtcacatgactcaaaagttctt
aagtatctcctggaggatactccctctcgaaggtctacttcactctctgg
agtgcggctttggctggtccctaggatgcatatagcagaaagctttaagc
tcggactaacatgggtgggagggagggaaaggcaag
gaattcatatcgggttagaaaggaaaacttcagcactgcttcttggctgc
agaagaattcaaatcaggagatcttgaaggtatttacaacccaggcaact
ctggagtggtagatttgttcgtgcactatatgaccactcagagaggtcaa
tgttagttgtgtcattatttacagaagaataaagttcaacagacagacca
atcagagaacacccacaaggaacagggactgggctgaggccttggagttg
cacagtgctgtgtacaggctggggaggaggcaggtgtggctcgtactggg
atgcacctatgggagggtgagggaccctgaggggtagagtaaagggagag
acggaaggcccacctgggcaaagctgcagagagcgttctgaaggcccagt
ggaggatttgtcagtttgctcctgagccatggtgttatgtagaactgact
atagcaagattgctcctttgtagatgtaatggttgatactactgactgga
gagagaccagactcagaatctaaggtgttttcattcacgagtagctttgg
caagtgacttaacctctccactactctgtttctgtgagtgtggtttgcga
gggataggttagaaaagaggggtaaaggtaccagcaaggcccagcctttc
agggtgttctgggtggtccataaagcttgggggcagggggaacctgaaaa
tctgcatggctaattccttattctgccacatggactgtccccaatggtca
ctgtcttctctcattaactcttggatcagagtagttatgatggaacttaa
attattcactagttatatttttctaggtatatgaaaaaatattatttgtc
tcagttaaagtaccaggtactttattttgttcatccaacaagtttttctg
gaatattttatgcaccgtagtgtggtcagtgccagccttcctgtccatat
cattgctcaaacatatgagcagagactcgagctgagtacatggagagcta
aatcagttctacagagaaaatgtttttatctccatgtacataggtattgg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_29848138_29849238
seq2: B6Ng01-158M08.b_48_1133

seq1  GAATTCTTCTTGACAGACAACAGTGGTCCTTCCACTCTGACACTTCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGACAGACAACAGTGGTCCTTCCACTCTGACACTTCCTCA  50

seq1  TGCTAGTCCAGGCTCTTTATTCTTAGTAGGCTTCTGACCCAACATGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTCCAGGCTCTTTATTCTTAGTAGGCTTCTGACCCAACATGTTCT  100

seq1  TATACACCAGCCTCGCTGAATTCTTCATTTAAAAGATTTTTAAATTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACCAGCCTCGCTGAATTCTTCATTTAAAAGATTTTTAAATTTTTT  150

seq1  TTTTTTACATTTATTTAGTGTGTTTGAATATCACACATGCAAAGGTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACATTTATTTAGTGTGTTTGAATATCACACATGCAAAGGTTAAA  200

seq1  AGACGACTCAGGGCAACCAGATCTCTCTTTCTACTATGTGGGTTCCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGACTCAGGGCAACCAGATCTCTCTTTCTACTATGTGGGTTCCTGTT  250

seq1  GTCAGGCTTGGTGGAAAGTGCCCTTACCTGCTGAGCCATCTTGTGAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTTGGTGGAAAGTGCCCTTACCTGCTGAGCCATCTTGTGAGTCC  300

seq1  CTGCTTTTGATTTTTTTGACAGTGTCTCTTTATACAGCCCAGGCTAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGATTTTTTTGACAGTGTCTCTTTATACAGCCCAGGCTAGCTT  350

seq1  AAAACCCACTATATAGCCAGGCTAGCCTGCTCCTGCCTCGGGTTCTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCACTATATAGCCAGGCTAGCCTGCTCCTGCCTCGGGTTCTGAAG  400

seq1  TACTGAGATTATAGGCTTTCTTTACTGCACCAATATTTGTGTCATTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGATTATAGGCTTTCTTTACTGCACCAATATTTGTGTCATTTATT  450

seq1  TGTTTGTTTTAAAAATTGCATTCGAGTGGCAAGAGCTAGCATTCACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTAAAAATTGCATTCGAGTGGCAAGAGCTAGCATTCACTATG  500

seq1  TGCCTCTGAAGTCCTACAAGTGCGCTATCAATCTCTCTGCGCGCTGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGAAGTCCTACAAGTGCGCTATCAATCTCTCTGCGCGCTGGGTA  550

seq1  AGGGGACCATCCCTTCCTTACCTCAGGGATGGCAAGAGAGTGAGTGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACCATCCCTTCCTTACCTCAGGGATGGCAAGAGAGTGAGTGGCTC  600

seq1  ATTTTAGTGTTCCTACAGTCTTAGCTAGCGATCCCCACAAGCGCGAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTGTTCCTACAGTCTTAGCTAGCGATCCCCACAAGCGCGAATCA  650

seq1  TTCCCTAACTTCCTCTGGATGGCGCTGTTCCCTCCGCCTACTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAACTTCCTCTGGATGGCGCTGTTCCCTCCGCCTACTTTTTTTTT  700

seq1  TTTTTCAGCTTATGGTCTCCAGCTCACCTTTCCCAGTCGGCACACCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGCTTATGGTCTCCAGCTCACCTTTCCCAGTCGGCACACCATCT  750

seq1  TGTAAGTTCTTGTTTAAGGTCCTGCACTTTACTGTCTTAGTGTGCTAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTCTTGTTTAAGGTCCTGCACTTTACTGTCTTAGTGTGCTAGGG  800

seq1  ATTGTGGGTACCTGTTCCTCTGACCTCTGCTCCGGGACACTCCAGGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTGTGGGTACCTGTTCCTCTGACCTCTGCTCCGGGACACTTCAGGTTGG  850

seq1  CCGCAATCGCTTCTTGTACTTTCTCTGCATGCATGCCATGCAATCTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAATCGCTTCTTGTACTTTCTCTGCATGCATGCCATGCAATCTCACA  900

seq1  TAGGATAGTTTTAAAACGCCTACCTACCAGTCACATGACTCAAAAGTTCT  950
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  TAGGATAG-TTTAAAACGCTTACCTACCAGTCACATGACTCAAAAGTTCT  949

seq1  TAAAGTATCTCCCTGAGGATAACTCCCTCTCGAAGGTCTACCTCACTCTC  1000
      | ||||||||||  |||||| |||||||||||||||||||| ||||||||
seq2  T-AAGTATCTCCTGGAGGAT-ACTCCCTCTCGAAGGTCTACTTCACTCTC  997

seq1  TGAGTTGCGGCTTTGGCTGGTCCCCTAAGATGCCATATAGCAGAAAGCTT  1050
      ||   |||||||||||||||| ||||| |||| |||||||||||||||||
seq2  TGGAGTGCGGCTTTGGCTGGT-CCCTAGGATG-CATATAGCAGAAAGCTT  1045

seq1  TAAAGCCTTCGGGACCTTAAACATGGTGTGGAGGGAAGGGGGAAAGGCAA  1100
      | ||||  || ||||    |||||||   |||||||   |||||||||||
seq2  T-AAGC--TC-GGAC---TAACATGGGTGGGAGGGA---GGGAAAGGCAA  1085

seq1  G  1101
      |
seq2  G  1086

seq1: chr16_29895833_29896890
seq2: B6Ng01-158M08.g_66_1116 (reverse)

seq1  ACCAATACCTATGTAACAATGAGATAAACACATTTTCTCTGTATGTACTG  50
      |||||||||||||| |||  |||||||| |||||||||||||| | ||||
seq2  ACCAATACCTATGT-ACATGGAGATAAAAACATTTTCTCTGTA-GAACTG  48

seq1  ATTTAGCTCTCCATTGTAACTCAGCTTCGAGTCTCTGCTTCATATGTTTT  100
      ||||||||||||| ||| ||||||| |||||||||||| ||||||| |||
seq2  ATTTAGCTCTCCA-TGT-ACTCAGC-TCGAGTCTCTGC-TCATATG-TTT  93

seq1  GAGCAATGATATGGACAGGAAGGCTGGCACTGACCACACTACGGTGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGATATGGACAGGAAGGCTGGCACTGACCACACTACGGTGCATA  143

seq1  AAATATTCCAGAAAAACTTGTTGGATGAACAAAATAAAGTACCTGGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCCAGAAAAACTTGTTGGATGAACAAAATAAAGTACCTGGTACT  193

seq1  TTAACTGAGACAAATAATATTTTTTCATATACCTAGAAAAATATAACTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAGACAAATAATATTTTTTCATATACCTAGAAAAATATAACTAG  243

seq1  TGAATAATTTAAGTTCCATCATAACTACTCTGATCCAAGAGTTAATGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTTAAGTTCCATCATAACTACTCTGATCCAAGAGTTAATGAGA  293

seq1  GAAGACAGTGACCATTGGGGACAGTCCATGTGGCAGAATAAGGAATTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGTGACCATTGGGGACAGTCCATGTGGCAGAATAAGGAATTAGC  343

seq1  CATGCAGATTTTCAGGTTCCCCCTGCCCCCAAGCTTTATGGACCACCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGATTTTCAGGTTCCCCCTGCCCCCAAGCTTTATGGACCACCCAG  393

seq1  AACACCCTGAAAGGCTGGGCCTTGCTGGTACCTTTACCCCTCTTTTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCTGAAAGGCTGGGCCTTGCTGGTACCTTTACCCCTCTTTTCTAA  443

seq1  CCTATCCCTCGCAAACCACACTCACAGAAACAGAGTAGTGGAGAGGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCTCGCAAACCACACTCACAGAAACAGAGTAGTGGAGAGGTTAA  493

seq1  GTCACTTGCCAAAGCTACTCGTGAATGAAAACACCTTAGATTCTGAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGCCAAAGCTACTCGTGAATGAAAACACCTTAGATTCTGAGTCT  543

seq1  GGTCTCTCTCCAGTCAGTAGTATCAACCATTACATCTACAAAGGAGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTCTCCAGTCAGTAGTATCAACCATTACATCTACAAAGGAGCAAT  593

seq1  CTTGCTATAGTCAGTTCTACATAACACCATGGCTCAGGAGCAAACTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATAGTCAGTTCTACATAACACCATGGCTCAGGAGCAAACTGACA  643

seq1  AATCCTCCACTGGGCCTTCAGAACGCTCTCTGCAGCTTTGCCCAGGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCCACTGGGCCTTCAGAACGCTCTCTGCAGCTTTGCCCAGGTGGG  693

seq1  CCTTCCGTCTCTCCCTTTACTCTACCCCTCAGGGTCCCTCACCCTCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCGTCTCTCCCTTTACTCTACCCCTCAGGGTCCCTCACCCTCCCAT  743

seq1  AGGTGCATCCCAGTACGAGCCACACCTGCCTCCTCCCCAGCCTGTACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCATCCCAGTACGAGCCACACCTGCCTCCTCCCCAGCCTGTACACA  793

seq1  GCACTGTGCAACTCCAAGGCCTCAGCCCAGTCCCTGTTCCTTGTGGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGCAACTCCAAGGCCTCAGCCCAGTCCCTGTTCCTTGTGGGTGT  843

seq1  TCTCTGATTGGTCTGTCTGTTGAACTTTATTCTTCTGTAAATAATGACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATTGGTCTGTCTGTTGAACTTTATTCTTCTGTAAATAATGACAC  893

seq1  AACTAACATTGACCTCTCTGAGTGGTCATATAGTGCACGAACAAATCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACATTGACCTCTCTGAGTGGTCATATAGTGCACGAACAAATCTAC  943

seq1  CACTCCAGAGTTGCCTGGGTTGTAAATACCTTCAAGATCTCCTGATTTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGAGTTGCCTGGGTTGTAAATACCTTCAAGATCTCCTGATTTGA  993

seq1  ATTCTTCTGCAGCCAAGAAGCAGTGCTGAAGTTTTCCTTTCTAACCCGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGCAGCCAAGAAGCAGTGCTGAAGTTTTCCTTTCTAACCCGAT  1043

seq1  ATGAATTC  1058
      ||||||||
seq2  ATGAATTC  1051