BAC Information

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BAC

Clone NameB6Ng01-159A08
Chromosome16 (Build37)
Map Location 28,017,609 - 28,018,767
singlet/doubletsinglet
Overlap genenone
Upstream geneOstn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159A08.bB6Ng01-159A08.g
ACCDH952809DH952810
length1,1531,218
definitionDH952809|Mus musculus domesticus DNA, BAC clone: B6Ng01-159A08, 5' end.DH952810|Mus musculus domesticus DNA, BAC clone: B6Ng01-159A08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatgaatacctgttaagttattctctttttttcaattttttat
tagatattttcttcatttatgtttcaaatgcttataaaatttgcaagacc
aagggacctctcttcccattgatggccaactaggccatcttctgctacat
atgcagctagagacacaagctctgggggtcctggttagttcatattgttg
ttccacctatagggttgcagacctcttcagccccttgggtactttcttta
gctcctccactgggggccctgtgttccatccaatagatgactatgagcat
cccacttctgtatttgccaggcactgtcatagcctcacaagagagagcta
tatcagggtcctgtcagcaaaatctttctggcaaatgcaatagtgtctgg
gtttgttggctgattatgggatggatccctgggtgggggagtctctggat
ggtcttagcgactttattttatttatttatttatttatttatttatttat
ttttatttttattttttttttggtttttcaaggcagggtttctctgtgta
gccctggctgtcctggaactcactctgtagaccaggctgacctcgaactc
agaagtctgcctgcctctgtctcccaagtgctgagatttaaggcatgtgc
caccactgcctggctaagagaaaaaaaaaagtcttagcttgtttctttaa
accaaatatagtacaaaacgttttttcatctactacagagcaatttgtat
cagtctagtgtactatcagaaaacatatttgcatgtaaaagcattgagag
cttctgagtaagaattgtcatctctgctgatgattactgctgaatataat
attttaatgagggtatttgacccagtgtgtcctcaccagctggtttctga
ccagtcaaattctgagaagcttcccactgattcacattcctttatgtggt
caccaggtcacaacctcctatggcagaatcacctcctgctgttttagatt
cagatgacaccaatggtatttgggatgcacagaaaaggaaatagggctcc
taggtgacccttctccattccagactggttttctggttgtttgccatcca
ttgctcatctcttgagggatcgaatatgaggggtttcttaacaagagaac
tag
gaattccaaatgggtaagattttatagattttattttgttcatctgttaa
ttttgcttgcttaaattttgtataagaatgcgcgcacacacacacacaca
cacgattatagaagtactcagagtttgttattatgagggtgacatcagaa
gggaacccatgaggtggcaccaagcacctgtttttacataattgccatgt
ttaaaaataacagcatctcctgcatttcaacactttcatacgcttaagaa
agaaagttacagagcagcagcggtcgccatcttggttccgggactcagca
gaacttaggaaattagtctgaacaggttagagggtacaccagagaaccgg
acagcttctgggacgggcagaagcacagacccgctgaggcagcacccttg
gtgggccgcagacagccggccaccgtccggaccagaggacaggtgtccgc
ctggcttgggaggcggcctcagtctcagcagcagcggttgccatcttggt
tccgggactcagcagaacttaggaaattagtctgaacaggttagagggtg
ctccagagaaccggacagcttctgggacgggcagaagcacagagctgctg
aggcagcaccctttgcaggctgcagacagccggccaccatccggaccaga
ggacaggtgtctggctcgggaggcggcctcagcctcaggagcagcggtcg
ccatcttggttccaggactccctggaacttaggaatttagtctgcacagg
tgagagtctgcaccacagaagctgacagcttctgggaactgccaaagcaa
cacagcttctgagagaggccctgttttgggccttcttcttcgaccaggag
gaggtccaaaaacaagatgtctgcgcaccttccctgtagagagcttgcca
gcagagagtgctctgagcactgaaactcagaggagagaatctgtctccca
gtctgctgagagactgttacagatcaccagagaacatctctaaacagagt
cactatactactactccagagattacagatggcgaaaggtaacgttagga
ttcctacttaaggaccaagaaccactcaccattcatctggacccagacct
atccactttcggccagttcagtcagcccaacaccggaacttgactgattt
taaagccatcctgatatgttaaggaactcgaagactatttattacttcag
aataccgagaacccgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28017609_28018767
seq2: B6Ng01-159A08.b_49_1201

seq1  GAATTCCTATGAATACCTGTTAAGTTATTCTCTTTTTTTCAATTTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGAATACCTGTTAAGTTATTCTCTTTTTTTCAATTTTTTAT  50

seq1  TAGATATTTTCTTCATTTATGTTTCAAATGCTTATAAAATTTGCAAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTTCTTCATTTATGTTTCAAATGCTTATAAAATTTGCAAGACC  100

seq1  AAGGGACCTCTCTTCCCATTGATGGCCAACTAGGCCATCTTCTGCTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCTCTCTTCCCATTGATGGCCAACTAGGCCATCTTCTGCTACAT  150

seq1  ATGCAGCTAGAGACACAAGCTCTGGGGGTCCTGGTTAGTTCATATTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTAGAGACACAAGCTCTGGGGGTCCTGGTTAGTTCATATTGTTG  200

seq1  TTCCACCTATAGGGTTGCAGACCTCTTCAGCCCCTTGGGTACTTTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTATAGGGTTGCAGACCTCTTCAGCCCCTTGGGTACTTTCTTTA  250

seq1  GCTCCTCCACTGGGGGCCCTGTGTTCCATCCAATAGATGACTATGAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCACTGGGGGCCCTGTGTTCCATCCAATAGATGACTATGAGCAT  300

seq1  CCCACTTCTGTATTTGCCAGGCACTGTCATAGCCTCACAAGAGAGAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCTGTATTTGCCAGGCACTGTCATAGCCTCACAAGAGAGAGCTA  350

seq1  TATCAGGGTCCTGTCAGCAAAATCTTTCTGGCAAATGCAATAGTGTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGGTCCTGTCAGCAAAATCTTTCTGGCAAATGCAATAGTGTCTGG  400

seq1  GTTTGTTGGCTGATTATGGGATGGATCCCTGGGTGGGGGAGTCTCTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGGCTGATTATGGGATGGATCCCTGGGTGGGGGAGTCTCTGGAT  450

seq1  GGTCTTAGCGACTTTATTTTATTTATTTATTTATTTATTTATTTATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTAGCGACTTTATTTTATTTATTTATTTATTTATTTATTTATTTAT  500

seq1  TTTTATTTTTATTTTTTTTTTGGTTTTTCAAGGCAGGGTTTCTCTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTATTTTTTTTTTGGTTTTTCAAGGCAGGGTTTCTCTGTGTA  550

seq1  GCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTC  600

seq1  AGAAGTCTGCCTGCCTCTGTCTCCCAAGTGCTGAGATTTAAGGCATGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCTGCCTGCCTCTGTCTCCCAAGTGCTGAGATTTAAGGCATGTGC  650

seq1  CACCACTGCCTGGCTAAGAGAAAAAAAAAAGTCTTAGCTTGTTTCTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGCCTGGCTAAGAGAAAAAAAAAAGTCTTAGCTTGTTTCTTTAA  700

seq1  ACCAAATATAGTACAAAACGTTTTTTCATCTACTACAGAGCAATTTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATATAGTACAAAACGTTTTTTCATCTACTACAGAGCAATTTGTAT  750

seq1  CAGTCTAGTGTACTATCAGAAAACATATTTGCATGTAAAAGCATTGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTAGTGTACTATCAGAAAACATATTTGCATGTAAAAGCATTGAGAG  800

seq1  CTTCTGAGTAAGAATTGTCATCTCTGCTGATGATTACTGCTGAATATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGTAAGAATTGTCATCTCTGCTGATGATTACTGCTGAATATAAT  850

seq1  ATTTTAATGAGGGTATTTGACCCAGTGTGTCCTCACCAGCTGGTTTCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGAGGGTATTTGACCCAGTGTGTCCTCACCAGCTGGTTTCTGA  900

seq1  CCAGTCAAATTCTGAGAAGCTTCCCACTGATTCACATTCCTTTATGTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAAATTCTGAGAAGCTTCCCACTGATTCACATTCCTTTATGTGGT  950

seq1  CACCAAGGTCAACAACCTCCTAATGGCAGAATCAACCTCCTGCTGTTTTT  1000
      |||| ||||| |||||||||| ||||||||||| ||||||||||||||| 
seq2  CACC-AGGTC-ACAACCTCCT-ATGGCAGAATC-ACCTCCTGCTGTTTT-  995

seq1  AGGATTCAAGATGACAC--ATGGTATTTGGGATGCAACAGAAAAAGAAAT  1048
        ||||| |||||||||  |||||||||||||||| |||||||| |||||
seq2  -AGATTC-AGATGACACCAATGGTATTTGGGATGC-ACAGAAAAGGAAAT  1042

seq1  AGGGACTCCTAGGGTGGACCCTTCTTCATTCCAGAATTGGTTTCT-GTTG  1097
      |||| ||||||||   ||||||||| ||||||||| | | ||||| ||||
seq2  AGGG-CTCCTAGG--TGACCCTTCTCCATTCCAGACTGGTTTTCTGGTTG  1089

seq1  TTTGCCAT-CATTGCTCAT-TCTTGAGGTA-CAATTAT--GGGGTTTCAT  1142
      |||||||| |||||||||| |||||||| | | | |||  |||||||| |
seq2  TTTGCCATCCATTGCTCATCTCTTGAGGGATCGAATATGAGGGGTTTCTT  1139

seq1  CAAAACAAGAGACCTAG  1159
         ||||||||| ||||
seq2  ---AACAAGAGAACTAG  1153