BAC Information

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BAC

Clone NameB6Ng01-160H06
Chromosome16 (Build37)
Map Location 59,466,511 - 59,467,640
singlet/doubletsinglet
Overlap genenone
Upstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803
Downstream geneMina, BC043118, LOC672884, Arl6, Epha6, LOC100043804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160H06.bB6Ng01-160H06.g
ACCDH953823DH953824
length1,1141,129
definitionDH953823|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H06, 5' end.DH953824|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttcagtgcagttaagttaaatacagttctgttcaattccatt
cagtttgtgcagccagtgcattcagtaaaatttggtttgtgaaattcaga
ggcatttttttttcaaagcagagcaattccgtgagaagtcaagagaagtc
tgtttgaatcaatcagcttggagaaaagttttgagtcagaacagctctca
gttgaaccatccagccagagttcagaaagaactagaaagggtgaggttat
tcaggagtaagcctctgaaaggataattacatctagtggaagaaagcaaa
atttacaactttcctgcaaatttcatacttttttaacagctgagtagaag
tctattgttcaaatataatacattttcttcttctattcttctattgaaga
ggatctaggttcttccaggtttggactataatgaataaagtctcaatgaa
catggctgaggaagtgaccttgtagtaggataaggaatccgttggatata
tgcccaagagtagtatggttgaatcttgaagtagaacaattccaaatttt
ctaaagaaacactacattgatttagtagctgtacaagtttgcactactcc
cagcactggagaagtatttccttgttctatgtccttacatgcatgacctg
tcacatgtcttagtgatcttaggcattctgacaggtgtaaaatggacttt
caaagtagttctgattggcatttccctgatggctaagaatggtgagcatt
tctttaaagtttctcagccatttgagattcccctattaagaattctatat
ttagatctgcacataatattttcaattgaattgttgttttttaacctagg
tttttaattctttacatattttcaatattggttcactagcggatgtggag
ttgttaaaaaatttccccattcactgacggcctttttgtccaaatgattg
ttatcctttgctttacagaagcttttaagtttcatgaaggtccaatttat
tagttgttgaacttgggtcctccacaattgctatttgtttgagaagtgat
cactggtgccaatgcatcttttgctttctctttaatcaggttcaaggtac
ctagattatgttga
gaattcaaggtcaggaaacaggagctgatggagaggccatggagggatgt
tatttactggcttccttcccctggcttgctcagcttgctttcttatagaa
cccaagactaccagcccaggatggacctcccacaatgggccctccccgca
ttgatcactaattgagaaaatgccttatagctggatctcatggaggcatt
tcctcaagggaggctcctttttctgtgataactctagcttgtgtcaagtt
ggcacacaaaaacagccagtacatttactaaaagcttatagcagcaatag
gagccatagaagggaacaagtcttcaataaatagagatgattttaaaatg
ggcattttatatcattccaacttataataagacatagaggcagttctgct
tagaataaaaattacctaaaacttaaagtacttcttcttatactaatgtg
tacccagaacatctgggcagacaggtgggaaagctgacgaggcctgatgt
tgcaggtccagatggaaaaaaaaaagagggagggggtgtatccttgttga
ggaaaaaagtgctaacatttgaatactactagaaatttatttgtcttcag
agctgatttcatctctaaatattttagagttactaaaatatacaatagga
aatattctgatgccttgcatgtaaaaatagattaggtggatgacagtgca
tccatccattcagtaaagcactttataccacgccatgttctttttgtttt
caggaataaaagcacggaatgtcatttataaatcaaagaataaaatcttg
ctacaaatagcacaattgtaaatacatttctcaatagggaggtaccttca
caagttcaaggcccatgtcagctctcataacagaaacaaggaggaagcaa
taagattaacagcgctgtaagtgctcagatagtaaaataaaaagtatgta
caaaaatctcgctttttgtgaaaataatgcatgtctgtttcccattacca
accctgactcctcctagcttctgaaacagaaacactagatgcaacctcct
ttcctgtccacatcttcttgtgattccacggacactcttggcctcccttc
ccagactgaaccctggtctcaatcctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59466511_59467640
seq2: B6Ng01-160H06.g_67_1195 (reverse)

seq1  GTTAGGGACTGAGACACAGGGTCCAGTCTGGGAAGGGAGGCAAAGAGGTG  50
      |||| ||| |||||| |||||| |||||||||||||||||| |||||   
seq2  GTTA-GGATTGAGAC-CAGGGTTCAGTCTGGGAAGGGAGGCCAAGAG--T  46

seq1  GTCCGTGGGATTCACAAG-AGATGTGGACAGGGAAAGGGAGGTTGCATCT  99
      |||||| ||| ||||||| |||||||||||||  || |||||||||||||
seq2  GTCCGT-GGAATCACAAGAAGATGTGGACAGG--AAAGGAGGTTGCATCT  93

seq1  AGTG-TTCTGTTTCAG-AGCTAGGGAGGAGTCTGGGGTTGGGTATGGGGA  147
      |||| ||||||||||| ||||| ||||||||| |||  | ||||  ||||
seq2  AGTGTTTCTGTTTCAGAAGCTA-GGAGGAGTCAGGG--TTGGTAATGGGA  140

seq1  AACAGAACATGCATATTTTTCACAAAAAGCGAGA-TTTTGTACATACTTT  196
      ||||| ||||||||  |||||||||||||||||| |||||||||||||||
seq2  AACAG-ACATGCATTATTTTCACAAAAAGCGAGATTTTTGTACATACTTT  189

seq1  T--ATTTACTATCTGAGCACTTACAGCGCTGTTTATCTTA-TGCTTCCTC  243
      |   ||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TTATTTTACTATCTGAGCACTTACAGCGCTGTTAATCTTATTGCTTCCTC  239

seq1  C-TGTGTCTGTTATGAGAGCTGACATGGGCCTTGAACTTGTGAAGGTACC  292
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTGTTATGAGAGCTGACATGGGCCTTGAACTTGTGAAGGTACC  289

seq1  T-CCTATTGAGAAATGTATTTAC-ATTGTGCTATTTGTAGCAAGATTTTA  340
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCCTATTGAGAAATGTATTTACAATTGTGCTATTTGTAGCAAGATTTTA  339

seq1  TTCTTTGATTTATAAATGACATTCCGTGCTTTTATTCCTGAAAACAAAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGATTTATAAATGACATTCCGTGCTTTTATTCCTGAAAACAAAAA  389

seq1  GAACATGGCGTGGTATAAAGTGCTTTACTGAATGGATGGATGCACTGTCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGCGTGGTATAAAGTGCTTTACTGAATGGATGGATGCACTGTCA  439

seq1  TCCACCTAATCTATTTTTACATGCAAGGCATCAGAATATTTCCTATTGTA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTAATCTATTTTTACATGCAAGGCATCAGAATATTTCCTATTGTA  489

seq1  TATTTTAGTAACTCTAAAATATTTAGAGATGAAATCAGCTCTGAAGACAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTAACTCTAAAATATTTAGAGATGAAATCAGCTCTGAAGACAA  539

seq1  ATAAATTTCTAGTAGTATTCAAATGTTAGCACTTTTTTCCTCAACAAGGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTCTAGTAGTATTCAAATGTTAGCACTTTTTTCCTCAACAAGGA  589

seq1  TACACCCCCTCCCTCTTTTTTTTTTCCATCTGGACCTGCAACATCAGGCC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCCCCTCCCTCTTTTTTTTTTCCATCTGGACCTGCAACATCAGGCC  639

seq1  TCGTCAGCTTTCCCACCTGTCTGCCCAGATGTTCTGGGTACACATTAGTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAGCTTTCCCACCTGTCTGCCCAGATGTTCTGGGTACACATTAGTA  689

seq1  TAAGAAGAAGTACTTTAAGTTTTAGGTAATTTTTATTCTAAGCAGAACTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAGTACTTTAAGTTTTAGGTAATTTTTATTCTAAGCAGAACTG  739

seq1  CCTCTATGTCTTATTATAAGTTGGAATGATATAAAATGCCCATTTTAAAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATGTCTTATTATAAGTTGGAATGATATAAAATGCCCATTTTAAAA  789

seq1  TCATCTCTATTTATTGAAGACTTGTTCCCTTCTATGGCTCCTATTGCTGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTATTTATTGAAGACTTGTTCCCTTCTATGGCTCCTATTGCTGC  839

seq1  TATAAGCTTTTAGTAAATGTACTGGCTGTTTTTGTGTGCCAACTTGACAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTTTTAGTAAATGTACTGGCTGTTTTTGTGTGCCAACTTGACAC  889

seq1  AAGCTAGAGTTATCACAGAAAAAGGAGCCTCCCTTGAGGAAATGCCTCCA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAGTTATCACAGAAAAAGGAGCCTCCCTTGAGGAAATGCCTCCA  939

seq1  TGAGATCCAGCTATAAGGCATTTTCTCAATTAGTGATCAATGCGGGGAGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCAGCTATAAGGCATTTTCTCAATTAGTGATCAATGCGGGGAGG  989

seq1  GCCCATTGTGGGAGGTCCATCCTGGGCTGGTAGTCTTGGGTTCTATAAGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTGTGGGAGGTCCATCCTGGGCTGGTAGTCTTGGGTTCTATAAGA  1039

seq1  AAGCAAGCTGAGCAAGCCAGGGGAAGGAAGCCAGTAAATAACATCCCTCC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCTGAGCAAGCCAGGGGAAGGAAGCCAGTAAATAACATCCCTCC  1089

seq1  ATGGCCTCTCCATCAGCTCCTGTTTCCTGACCTTGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCTCCATCAGCTCCTGTTTCCTGACCTTGAATTC  1129