BAC Information

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BAC

Clone NameB6Ng01-161K01
Chromosome16 (Build37)
Map Location 83,564,928 - 83,566,060
singlet/doubletsinglet
Overlap geneLOC100039572
Upstream geneEG665260, EG545172
Downstream geneEG621729, LOC640489, LOC665664, LOC547311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161K01.bB6Ng01-161K01.g
ACCDH954691DH954692
length1,2651,105
definitionDH954691|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K01, 5' end.DH954692|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccaacttgcttctaatatgcaatgtagcctgtaccaaagattt
ctatctcagtaggattccctagctctttcattgtagacactctgcagacc
agccctgagctgctgtccttagtaaatactctgcagaccagctctgagct
gctggctccgtcttttgtaatgcttaattagttactgtataggtaacttc
cttactgcattcctatcagattccaagctcttcagcttctggcacattgg
aacactggtgggagacttaactatatcagaatttactcttaaaaggcact
tataataaaataatactaaaagagagcacatggatccatacaccagacta
acgcggggatagggtatgagtatatggtttaataagaatgccaaaggtcc
aggaggtgagtttccatgaaactctttgcctcatgagcacttccaggcct
ctcagcctgtcaagcaaacttcattggagtgtgtgtagcagaaactggag
gcagaagtttaagcaaaggactatgaaagaacactgcttgctagcttgct
ctttgtggcttttgctccttctcatcagaatttcaaagagctaatattgt
gagaccaaatcttttctgttccaactccatcttagagaatatgacataag
tttgaactgaagtgaactaagaggctggtacctagcactagcttctaagc
aaccccccccccccaaacaaaacaaaacaaaacaaaacaaaacaaaacaa
aacaaaaaccaaaacaaactgtctctagcacaagtttccaggttatcccc
ccacccccccaatctgaagaagaccacacataacacttcagtttctaaca
atcgccattcaggaggaaaacagaagttaagtttctggtttgtctgccag
caccagccaacttactttaaagaacatcatgacctactgccccaaaacag
attttgtagcaggctagatactggcggtcttgcctttataatgcttggct
tcaaactaggctcacggctctacttcctgttgtggtcagggttggcaggg
agctcaaactgaaattgataaggataacctattgcgatgcatcttgtggg
tcttttaggcgctcataaaatgtttctggcacaaatgttagtgtgcatag
tcaggactcaggcttcaggactgatctgggaggtcaatacagaaatgctt
gcctctcatctgggtgaggctcgtcgtagcccagtgtggttactttctca
taatctcattattca
gaattcttcatcttcaggtatagcaaattgcaagtgacgaaaggtatata
ctttacctttaagccttttgatacatttcgtgccaactcaagaacctttg
tggtatggaaatccaggatggctgcaatgtgcacatcagcattgtgccca
agtgcccatggatggttggattagatttcaggtgtcagaacatatggcca
atggggaactgtaagctggcttggtgccagcgggtaaccgcctttgcctt
agacttgctggagtcatttccagccttacggccagccatcttggactgtg
ctggccaggcaggcactcaacaagatcccagcacccacgcttccttcttt
accatgaacgaaacttcccctcatacgtttttctatgccatgttttcata
ttcatttgtattcacattcttcagtcatcatttaataatgcctactttaa
gatccacaattttgagatatttctgatgttattttatttatgtttttaaa
attgatcattacatttgtttacatctcaaatgatatcccacttcccagtc
acccctccaaaagcccccccatcccaccaactccctttcattccttccct
ttgcctttctgagggtggtccctcactcacccatcctctcctgcctcacc
cctccagtatccccccatgctggagcatcaaatctccagacctcctctcc
cattgatgtcaggcaaggccattctctgcttcctatgtatctgcagtcat
gaatccttccctgtacatttaaaggttttaataaattcagaacactcaaa
tttggccatatttttaggattatgatatttacttcttcagttttccccta
gatcaaagatatgaacttatttatcatttaaggtataagcttagtgcttc
tttcatggtcatggattccttttccctctctttcagtaatgatggatcgt
ttactgagtaaagtagcctagtggcatagtttcttcagaatttcatctct
tgctttgtggtgcgcatgtcatgactacatatgctaatttagtgagatct
tgtcttcaccctatactccaaagcatcaacttgaagaccaactgtattta
ttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83564928_83566060
seq2: B6Ng01-161K01.g_66_1170 (reverse)

seq1  AACAATAAATACAGTTGTGGTACTGTCAGAAGTTGAATGCTTTTGGGAAG  50
      |||||||||||||||  |||| || ||  |||||| |||||||   | ||
seq2  AACAATAAATACAGT--TGGT-CT-TC--AAGTTG-ATGCTTT---GGAG  40

seq1  TAATTAGGGTTTGAGGACAAGATTCTCACTAGAAATAGCATATTGTAGTC  100
      ||  |||||  ||| ||||||| |||||||| || ||||||| |||||||
seq2  TA--TAGGG--TGAAGACAAGA-TCTCACTA-AATTAGCATA-TGTAGTC  83

seq1  AATGGACCATGCGCACCACAAAGCAAAGAGATGAAAATTCTGAAAGAAAA  150
       |||   ||||||||||||||||| |||||||| ||||||||||   |||
seq2  -ATG--ACATGCGCACCACAAAGC-AAGAGATG-AAATTCTGAA--GAAA  126

seq1  CTAATGCCAACCTAGGCTACTTTACTCAGTTAAACGATCCATCATTACTG  200
      || ||||||  |||||||||||||||||| ||||||||||||||||||||
seq2  CT-ATGCCA--CTAGGCTACTTTACTCAG-TAAACGATCCATCATTACTG  172

seq1  AAAGAGAGGGAAAAGGAATCCATGACCATGAAAGAAGCACTAAGCTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGGGAAAAGGAATCCATGACCATGAAAGAAGCACTAAGCTTATA  222

seq1  CCTTAAATGATAAATAAGTTCATATCTTTTGATCTAGGGGAAAACTGAAG  300
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTTAAATGATAAATAAGTTCATATC-TTTGATCTAGGGGAAAACTGAAG  271

seq1  AAGTAAATATCATAATCCTAAAAATATGGCCAAATTTGAGTGTTCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATATCATAATCCTAAAAATATGGCCAAATTTGAGTGTTCTGAAT  321

seq1  TTATTAAAACC-TTAAATGTACAGGGAAGGATTCATGACTGCAGATACAT  399
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAACCTTTAAATGTACAGGGAAGGATTCATGACTGCAGATACAT  371

seq1  AGGAAGCAGAGAATGGCCTTGCCTGACATCAATGGGAGAGGAGGTCTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGAGAATGGCCTTGCCTGACATCAATGGGAGAGGAGGTCTGGA  421

seq1  GATTTGATGCTCCAGCATGGGGGGATACTGGAGGGGTGAGGCAGGAGAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATGCTCCAGCATGGGGGGATACTGGAGGGGTGAGGCAGGAGAGG  471

seq1  ATGGGTGAGTGAGGGACCACCCTCAGAAAGGCAAAGGGAAGGAATGAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGAGTGAGGGACCACCCTCAGAAAGGCAAAGGGAAGGAATGAAAG  521

seq1  GGAGTTGGTGGGATGGGGGGGCTTTTGGAGGGGTGACTGGGAAGTGGGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGTGGGATGGGGGGGCTTTTGGAGGGGTGACTGGGAAGTGGGAT  571

seq1  ATCATTTGAGATGTAAACAAATGTAATGATCAATTTTAAAAACATAAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGAGATGTAAACAAATGTAATGATCAATTTTAAAAACATAAATA  621

seq1  AAATAACATCAGAAATATCTCAAAATTGTGGATCTTAAAGTAGGCATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATCAGAAATATCTCAAAATTGTGGATCTTAAAGTAGGCATTAT  671

seq1  TAAATGATGACTGAAGAATGTGAATACAAATGAATATGAAAACATGGCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATGACTGAAGAATGTGAATACAAATGAATATGAAAACATGGCAT  721

seq1  AGAAAAACGTATGAGGGGAAGTTTCGTTCATGGTAAAGAAGGAAGCGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACGTATGAGGGGAAGTTTCGTTCATGGTAAAGAAGGAAGCGTGG  771

seq1  GTGCTGGGATCTTGTTGAGTGCCTGCCTGGCCAGCACAGTCCAAGATGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATCTTGTTGAGTGCCTGCCTGGCCAGCACAGTCCAAGATGGC  821

seq1  TGGCCGTAAGGCTGGAAATGACTCCAGCAAGTCTAAGGCAAAGGCGGTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTAAGGCTGGAAATGACTCCAGCAAGTCTAAGGCAAAGGCGGTTA  871

seq1  CCCGCTGGCACCAAGCCAGCTTACAGTTCCCCATTGGCCATATGTTCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTGGCACCAAGCCAGCTTACAGTTCCCCATTGGCCATATGTTCTGA  921

seq1  CACCTGAAATCTAATCCAACCATCCATGGGCACTTGGGCACAATGCTGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGAAATCTAATCCAACCATCCATGGGCACTTGGGCACAATGCTGAT  971

seq1  GTGCACATTGCAGCCATCCTGGATTTCCATACCACAAAGGTTCTTGAGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATTGCAGCCATCCTGGATTTCCATACCACAAAGGTTCTTGAGTT  1021

seq1  GGCACGAAATGTATCAAAAGGCTTAAAGGTAAAGTATATACCTTTCGTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGAAATGTATCAAAAGGCTTAAAGGTAAAGTATATACCTTTCGTCA  1071

seq1  CTTGCAATTTGCTATACCTGAAGATGAAGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  CTTGCAATTTGCTATACCTGAAGATGAAGAATTC  1105