BAC Information

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BAC

Clone NameB6Ng01-161O20
Chromosome16 (Build37)
Map Location 82,955,596 - 82,956,456
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161O20.bB6Ng01-161O20.g
ACCDH954905DH954906
length1,1991,109
definitionDH954905|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O20, 5' end.DH954906|Mus musculus domesticus DNA, BAC clone: B6Ng01-161O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagctccatatttaaggtggctatttgactt
tctggagtccaccctcttgagttctttatatatattggatattagtcccc
tatctgatttaagataggtgaagattctttcccaatctgttgttggcttt
tttgtcttattgatggtgtcttttgccttgcagaagctttccagtttcat
gaggtcccatttgtcaatccttaatcttacagcacaagccattgctgttc
tattcaagaattttttccctgtgcccatatattcgagacttttccccact
ttttcctctataagtttcagtgtctccggttttatgtggagttccttgat
ccacttagatttgaccttagtacaaggagagaggaatgggtcaattcgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcagttctattccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgggcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcgggacttgaagttttatcatacag
atctttcacttcctagtagagtcacgcagatatttatattatttgtgact
atgagacggtgttgtttccctaatttttttctcagcctgtttattcttgg
tgtaagaaagccatttacctggtttgagtaattttattcaggctacttca
cgagctgtttacagttagagttcctggtggaatttaaggcacttaatatc
atctatacctggcaaaaggaatatgagactccgttcaatggatctgatcc
tttgtgcaagtctctgcagtactcaacactagtgacgagcaatgcatgc
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagc
tgaggatggcgctgcctcagaagctctgtggctcttgctgggaaggtggc
tggttgtctggagctgaagatggcgccgcccagaagctctgcgactctcg
cccgtcccagaaacggctggcactctgtattccacacggtcacccgtgca
gcctgccctccgcggagtcccggagccaagaaggctcccgccggcgcctg
tgccacaaacctctcaggccgggcagacccccgtgctctcaccaggaagg
tggccggctgtctggagctgaagatggcgccgtccagaagctctgcgact
ctcgccgtaagatacctttctaataattatttaatatttaaggctacctc
ttttataccgagaaaataatatcaatattcactatataatctctcatgga
atgaactataatcaatgaattatcaatgtgatagtgacattatgttatac
attaccataggatgtgaaagttcataaaattataagcactgtttttcttc
atacaagggaagattttgtactatttagcagaatatctcaggagtctata
ttcgtaccttattcatttcttgagtctcgaaattccatagaggtaatggg
agtcatatcccaatgttctttactacaatgacagttaagttatggaacac
acttagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82955596_82956456
seq2: B6Ng01-161O20.g_326_1177

seq1  GCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTC  50

seq1  TGTAGGCAAGCTCTCCTCTTTCAGGGAAGGTGTACAGTTATCTGGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCAAGCTCTCCTCTTTCAGGGAAGGTGTACAGTTATCTGGTGTTT  100

seq1  GGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGA  150

seq1  AGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGTTGTCTGGAGCTGAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGTTGTCTGGAGCTGAGGAT  200

seq1  GGCGCTGCCTCAGAAGCTCTGTGGCTCTTGCTGGGAAGGTGGCTGGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTGCCTCAGAAGCTCTGTGGCTCTTGCTGGGAAGGTGGCTGGTTGT  250

seq1  CTGGAGCTGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCC  300

seq1  CAGAAACGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCC  350

seq1  CTCCGCGGAGTCCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCGGAGTCCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACA  400

seq1  AACCTCTCAGGCCGGGCAGACCCCCGTGCTCTCACCAGGAAGGTGGCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTCAGGCCGGGCAGACCCCCGTGCTCTCACCAGGAAGGTGGCCGG  450

seq1  CTGTCTGGAGCTGAAGATGGCGCCGTCCAGAAGCTCTGCGACTCTCGCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGGAGCTGAAGATGGCGCCGTCCAGAAGCTCTGCGACTCTCGCCG  500

seq1  TAAGATACCTTTCTAATAATTATTTAATATTTAAGGCTACCTCTTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAGATACCTTTCTAATAATTATTTAATATTTAAGGCTACCTCTTTT-AT  549

seq1  ACCGAGAAAATAATATCAAATATTCACTATATAATCTCTCATGGAATGAA  600
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCGAGAAAATAATATC-AATATTCACTATATAATCTCTCATGGAATGAA  598

seq1  CTATAATCAATGAATTATCAATGTGATAGTGACATTATGTTAATACATTA  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTATAATCAATGAATTATCAATGTGATAGTGACATTATGTT-ATACATTA  647

seq1  CCATAGGATGTTGAAAGTTCATAAAAATTATAAAGCACTGTTTTTCTTCA  700
      |||||||||| ||||||||||| |||||||| ||||||||||||||||||
seq2  CCATAGGATG-TGAAAGTTCAT-AAAATTAT-AAGCACTGTTTTTCTTCA  694

seq1  TACAAGGGAAGA-TTTGTACTATTTAGCAAGATATCTCA-GAGTCTATAT  748
      |||||||||||| ||||||||||||||||  |||||||| ||||||||| 
seq2  TACAAGGGAAGATTTTGTACTATTTAGCAGAATATCTCAGGAGTCTATA-  743

seq1  TTCCTTACTTATTCCATTTCTCTGAGTCTCGATATTCCATAGAGGTAAAT  798
      ||| |  |||||| ||||||| |||||||||| |||||||||||||||  
seq2  TTCGTACCTTATT-CATTTCT-TGAGTCTCGAAATTCCATAGAGGTAATG  791

seq1  GGAGTCA-ATACCACATGTTCTTTACATACAAAGACAG-TAAGTTAATGA  846
      ||||||| || ||| ||||||||||| ||||| ||||| |||||||  ||
seq2  GGAGTCATATCCCA-ATGTTCTTTAC-TACAATGACAGTTAAGTTATGGA  839

seq1  ACACACTTTAAGATT  861
      ||||||||  |||||
seq2  ACACACTT--AGATT  852