BAC Information

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BAC

Clone NameB6Ng01-162I19
Chromosome16 (Build37)
Map Location 64,481,315 - 64,482,424
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540, Ckt2
Downstream gene4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162I19.bB6Ng01-162I19.g
ACCDH955362DH955363
length1,2411,106
definitionDH955362|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I19, 5' end.DH955363|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcccaaacccccctacagcttctaaactcatgatcccttttac
cttttattttacatataactcattgagtccatttcatgttgtccataagt
gcacggctacaggaccatttactgaagcatgtacaaattactggagctcc
ttcctgaataaactggctcttccttctcccagaagccagaagctgcctgc
agctcctcatcagggaagccccttacctctccatttcagtcttgtgctgc
accacaatttctgtggggtcattcgtgtaataaccctttcaagtctggaa
gtcaccagtcccagcactggtccctggtgtctggctcttatcatcttcct
gtctccttctagatgatgttctctgagattttgggagctacagatataat
gtagcttttacattcagggctgagcacactaccatcatgtatttcctgca
ctttaagcagtctcgagtctctgcattaatcagcgtctgctatgaacgaa
ccatctctgatgagggttgacagatgcactcatctatgagtacaaagatg
acatatgtagagtacaatttaaaactatgtctaattagcaaaataatagt
tataggcctttctttggagtctatgacatcctaggtgaagggttttggac
aggtttacaataccatgtatgagtgctgccatgtggaggagactttaagt
caaactagaaagtggtttgaagcaacatgtgtatcttgtcacatcagtca
gtattgtagactttgaggttcattgctgggtagaactgttgattaggtct
cttccctagctgtctacatagtactttccatcactatgaaaactagcttc
taggtaggagattcatttctccatgctccgagatacaagtgtacggtgct
tttgacgatagcgtctcaccataatttctggtggatcaccaagagtgatt
ggtactagcatagtaaaccaagttttctttttaaagagaaatatttattt
taatgtgtaaacgtgtacacctatgtgtgcacatgatgcctaccaggcta
gtggagtgcataagaccatttggtggaaatggaattgaactcatgtttct
ggaaagacagcctgaactctgaacaaacagagccatctggattcatcttc
cagttcaggctactctttttgaaagagttatcaaggaatttaattccata
aaagtggaatagcgagctgtcaaataatccttaagtgtggt
gaattcttcatatatatcaacttattcaagtaatataggaacaactacat
tattgctattagtggttcccttttgttaatgtagtttgatagacttattc
tcccctactacaattatttgaaacatagcttatgagaatcctagtgcaat
tgcttttaagtatttggtcattgggatccatagtatttattgattaaatt
tcagtcttcctaatactagttttacaaaatacgtcctgattatctctact
ctttcaaaggtatcctacaaagaatcaaacttctccatctaaaagtgcca
gtgataattgaaacacaaacaaataaaactcaattaatttaattctcttc
ctagagaaatttattttcctatgtcttccattgtagtcctaaaacttaga
ggtttattttagaatccttgtagccatagagggtaatttcattttataac
actatttaaatatcaatattgattgatttttgcctttttcatatcttaat
cttccagtctcaccatttcagtttttctatatgtacatcatagacaaatt
aatgtgtgaatatatttacttctataagtcatttgccaataaatgaaccc
ttttccattttctgtcaccagaagtaaaagagtaaactctctggacagat
gcccctgatgcccacatgtggatttcacaagctttcaatgtctgaaaagg
atttgttaagtttctagttcaaaccctcagaatacaacaaattgcccatt
taaatacctgagtaatatatcaataaataccatcagtatttgatacacac
aatgaaaactgaaggattcaataccttcagagaatgtatattaaaaagaa
agttcttgtactgctaaatttgcacagataattctcattgttaagttttc
tagttgtatctgttaattaaattagtattactattcaaaaagagaatttc
cactacaaagaacattacagcagacatatgtgcataaaaaaaaaacattc
tttgagtatttttttaagtttattattattattatgggtattattcattt
acaattcccatgcatcccaaaagtccccacattgctccccccaccattcc
caccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64481315_64482424
seq2: B6Ng01-162I19.g_70_1175

seq1  GAATTCTTCATATATATCAACTTATTCAAGTAATATAGGAACAACTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATATATATCAACTTATTCAAGTAATATAGGAACAACTACAT  50

seq1  TATTGCTATTAGTGGTTCCCTTTTGTTAATGTAGTTTGATAGACTTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTATTAGTGGTTCCCTTTTGTTAATGTAGTTTGATAGACTTATTC  100

seq1  TCCCCTACTACAATTATTTGAAACATAGCTTATGAGAATCCTAGTGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACTACAATTATTTGAAACATAGCTTATGAGAATCCTAGTGCAAT  150

seq1  TGCTTTTAAGTATTTGGTCATTGGGATCCATAGTATTTATTGATTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAAGTATTTGGTCATTGGGATCCATAGTATTTATTGATTAAATT  200

seq1  TCAGTCTTCCTAATACTAGTTTTACAAAATACGTCCTGATTATCTCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTCCTAATACTAGTTTTACAAAATACGTCCTGATTATCTCTACT  250

seq1  CTTTCAAAGGTATCCTACAAAGAATCAAACTTCTCCATCTAAAAGTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAGGTATCCTACAAAGAATCAAACTTCTCCATCTAAAAGTGCCA  300

seq1  GTGATAATTGAAACACAAACAAATAAAACTCAATTAATTTAATTCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAATTGAAACACAAACAAATAAAACTCAATTAATTTAATTCTCTTC  350

seq1  CTAGAGAAATTTATTTTCCTATGTCTTCCATTGTAGTCCTAAAACTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAATTTATTTTCCTATGTCTTCCATTGTAGTCCTAAAACTTAGA  400

seq1  GGTTTATTTTAGAATCCTTGTAGCCATAGAGGGTAATTTCATTTTATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATTTTAGAATCCTTGTAGCCATAGAGGGTAATTTCATTTTATAAC  450

seq1  ACTATTTAAATATCAATATTGATTGATTTTTGCCTTTTTCATATCTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTAAATATCAATATTGATTGATTTTTGCCTTTTTCATATCTTAAT  500

seq1  CTTCCAGTCTCACCATTTCAGTTTTTCTATATGTACATCATAGACAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTCTCACCATTTCAGTTTTTCTATATGTACATCATAGACAAATT  550

seq1  AATGTGTGAATATATTTACTTCTATAAGTCATTTGCCAATAAATGAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGAATATATTTACTTCTATAAGTCATTTGCCAATAAATGAACCC  600

seq1  TTTTCCATTTTCTGTCACCAGAAGTAAAAGAGTAAACTCTCTGGACAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTTTCTGTCACCAGAAGTAAAAGAGTAAACTCTCTGGACAGAT  650

seq1  GCCCCTGATGCCCACATGTGGATTTCACAAGCTTTCAATGTCTGAAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGATGCCCACATGTGGATTTCACAAGCTTTCAATGTCTGAAAAGG  700

seq1  ATTTGTTAAGTTTCTAGTTCAAACCCTCAGAATACAACAAATTGCCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAAGTTTCTAGTTCAAACCCTCAGAATACAACAAATTGCCCATT  750

seq1  TAAATACCTGAGTAATATATCAATAAATACCATCAGTATTTGATACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCTGAGTAATATATCAATAAATACCATCAGTATTTGATACACAC  800

seq1  AATGAAAACTGAAGGATTCAATACCTTCAGAGAATGTATATTAAAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACTGAAGGATTCAATACCTTCAGAGAATGTATATTAAAAAGAA  850

seq1  AGTTCTTGTACTGCTAAATTTGCACAGATAATTCTCATTGTTAAGTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGTACTGCTAAATTTGCACAGATAATTCTCATTGTTAAGTTTTC  900

seq1  TAGTTGTATCTGTTAATTAAATTAGTATTACTATTCAAAAAGAGAATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTATCTGTTAATTAAATTAGTATTACTATTCAAAAAGAGAATTTC  950

seq1  CACTACAAAGAACATTACAGCAGACATATGTGCAT-AAAAAAAAACATTC  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACTACAAAGAACATTACAGCAGACATATGTGCATAAAAAAAAAACATTC  1000

seq1  TTTGAGTATTTTTTT-AGTTTATTATTATTATTATTGGGTATTTATTTCA  1048
      ||||||||||||||| |||||||||||||||||| ||||||||   ||||
seq2  TTTGAGTATTTTTTTAAGTTTATTATTATTATTA-TGGGTATT--ATTCA  1047

seq1  TTTACATTTCCAATGCTATCCCAAAAGTCCCCCACA-TGCTCCCCCACCC  1097
      |||||| |||| |||| ||||||||||| ||||||| |||||||||  ||
seq2  TTTACAATTCCCATGC-ATCCCAAAAGT-CCCCACATTGCTCCCCCCACC  1095

seq1  ACTCCCCCACCCA  1110
      | |  ||||||||
seq2  ATT--CCCACCCA  1106