MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-163F11
Chromosome	16 (Build37)
Map Location	90,791,332 - 90,792,337
singlet/doublet	singlet
Overlap gene	4921511H13Rik
Upstream gene	Tiam1, LOC100040496, LOC640694, LOC100040440, Sod1, Sfrs15, LOC545175, Hunk, 2610039C10Rik, Mrap
Downstream gene	4931408A02Rik, LOC665863, 1110004E09Rik, 4930534H18Rik, Synj1, 1810007M14Rik, 4932438H23Rik, H3f3a-ps2, Olig2, Olig1, Ifnar2, Il10rb, Ifnar1, LOC665939, LOC665947, Ifngr2, Tmem50b, ORF28, Gart, Son, Donson, Cryzl1, LOC100040653, Itsn1
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-163F11.b	B6Ng01-163F11.g
ACC	DH955955	DH955956
length	1,113	999
definition	DH955955\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F11, 5' end.	DH955956\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccccttaaagagatagccccgctggccatctatcccttgcttcag ggaagatgagcagggatgagagccctgggatgtatgcttgttatagtgtg tgtgttttttgtgtttggcacatgtgttaggtgcagagtgtgcggcccgc actttcgccatggtagcgtaggcttttgctgcagtggaggcgggacaatc tcctcagattcggtttgccgctctaaaagaaattatgctgcgttatgccg tggggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcc tgtggaaggcacgtctgattgcatgaagggtcagggtcctagttcccttc ccccaggaaaaatgacacgggagctggccaagacctctctgggtgatgag cctaagggatggttttgtgtagggcccctatgcttgcacactggggatca gacctctaccttcacccatgaggcttgcttgcagcaattaagatctggcc atagattaatcaacatcctggccttttgatgcacctgccacaagcaaaac acaatctccccaggtgtggcttggcatgatagagaggtagtcagtgataa gactccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgt ttgtcacccaaggacgggtaaggggcatggctgctgggggctatctacag acattctctctgccaaaaaaaagaaaaaagggggaattgtggggagcggg tgtggcggcagtcccaaaggcgccagggactgcagctaagtcatatgact tgcacctgacttcctcatataagacacaaacatcttgagtgctgcgcagg tgtccaggatacaggtgaatcaatttggtggagatatgcccctgctgcct tgatagctgaggctgcgtgcctggtgagcggcgtggcctgctgtgcgtgg aagagagtataaaaggagtggagaggcccagggttcggggggaattataa accagggagattaaaaaccacggtagatattaaccagggagattaaaccg gggaatacaaccgtgggagatattaatcaaggtgagtttaaacaagggga atataaacacaag	gaattcaagcaggtcaggaagcaggaggtgatgcagaggccatggaggga tgttccttactggttggcttcccctggcttgctcagcctgctctcttata aaacccaggaaaccagtccagggatggcaccacccacaaggggacctctg cactcgatcactaattgaaaaaatgccccacagctggatctcatggaggc atttcctcaactgaaactcctttctctgtgataactccatctgtgtcagg ttgacacacaaaaccagccagtacacacagtcatgcctggtattttgcat ccagtgctcttgcttactgaggcagctctggaaatctgaagtttgaaatg ctctaagatatgaaacttgaacatcatattggtgttcagagagttgtgga tcttggatttgtagatcatacttaactataaatgaatcaagtagaactat agtagtggcacctagtgtggcttagcttcctctgatttatggtcttcagt tggggacatttccatgatggttggctttctgcctcagactggccgttgac tcgtggttttcttagagcacctgtgaacgcagtctcctaaggcctgtgag aatcgctcgccttggccgtgcatagaaaagccgccctgtgccagcctgtc ctggagctgcttctattgctctccagccctatgctgctgaagggggcgct tgtgtgatgttatagactggcttgaattcttacggtgtagcttggttact gtgtgtctagtattctcatggaggtccagctttgacatcctagcagtttg tgtagtgatatatagtggatttgggggacttacacatagtatttcttcca tccgtaactcagtctctctcttccttttgtagatctatgagctcagccag agatttccccgggcttttgacagagagttttcccattgccaaggctctgg cgatgtgatggtgacacagtgcctctgtgtgaataagatcatgttcact
quality values	Open. 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Alignment Information

BAC End 1	BAC End 2
	seq1: chr16_90791332_90792337 seq2: B6Ng01-163F11.g_70_1068 (reverse) seq1 AGTGAACATGATCTTATTGCACACCAGAGGCACTGTGGTCACCATCACCA 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\| seq2 AGTGAACATGATCTTATT-CACA-CAGAGGCACTGT-GTCACCATCA-CA 46 seq1 TCGCCAGGAGCCTTGGCAATGGGATAAACTCTCTGGTCCAAAAGGCCGGG 100 \|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\| \|\|\|\|\| seq2 TCGCCA-GAGCCTTGGCAATGGGA-AAACTCTCTG--TCAAAAGCCCGGG 92 seq1 GAAATCTCTGGCTGGGCCTCATAGATCTACAAAAGGAAGAGAGAGACTGA 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\| \| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAAATCTCTGGCTGAG-CTCATAGATCTACAAAAGGAAGAGAGAGACTGA 141 seq1 GTTACGGATGGAAGAAATACTATGTGTAAGTCCCCCAAATCCACTATATA 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTTACGGATGGAAGAAATACTATGTGTAAGTCCCCCAAATCCACTATATA 191 seq1 TCACTACACAAACTGCTAGGATGTCAAAGCTGGACCTCCATGAGAATACT 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCACTACACAAACTGCTAGGATGTCAAAGCTGGACCTCCATGAGAATACT 241 seq1 AGACACACAGTAACCAAGCTACACCGTAAGAATTCAAGCCAGTCTATAAC 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGACACACAGTAACCAAGCTACACCGTAAGAATTCAAGCCAGTCTATAAC 291 seq1 ATCACACAAGCG-CCCCTTCAGCAGCATAGGGCTGGAGAGCAATAGAAGC 349 \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATCACACAAGCGCCCCCTTCAGCAGCATAGGGCTGGAGAGCAATAGAAGC 341 seq1 AGCTCCAGGACAGGCTGGCACAGGGCGGCTTTTCTATGCACGGCCAAGGC 399 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGCTCCAGGACAGGCTGGCACAGGGCGGCTTTTCTATGCACGGCCAAGGC 391 seq1 GAGCGCTTCTCACAGGCCTTAGGAGGCTGCGTTCACAGGTGCTCTAAGAA 449 \|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAGCGATTCTCACAGGCCTTAGGAGACTGCGTTCACAGGTGCTCTAAGAA 441 seq1 AACCACGAGTCAACGGCCAGTCTGAGGCAG-AAGCCAACCATCATGGAAA 498 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AACCACGAGTCAACGGCCAGTCTGAGGCAGAAAGCCAACCATCATGGAAA 491 seq1 TGTCCCCAACTGAAGACCATAAATCAGAGGAAGCTAAGCCACACTAGGTG 548 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGTCCCCAACTGAAGACCATAAATCAGAGGAAGCTAAGCCACACTAGGTG 541 seq1 CCACTACTATAGTTCTACTTGATTCATTTATAGTTAAGTATGATCTACAA 598 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCACTACTATAGTTCTACTTGATTCATTTATAGTTAAGTATGATCTACAA 591 seq1 ATCCAAGATCCACAACTCTCTGAACACCAATATGATGTTCAAGTTTCATA 648 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATCCAAGATCCACAACTCTCTGAACACCAATATGATGTTCAAGTTTCATA 641 seq1 TCTTAGAGCATTTCAAACTTCAGATTTCCAGAGCTGCCTCAGTAAGCAAG 698 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCTTAGAGCATTTCAAACTTCAGATTTCCAGAGCTGCCTCAGTAAGCAAG 691 seq1 AGCACTGGATGCAAAATACCAGGCATGACTGTGTGTACTGGCTGGTTTTG 748 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGCACTGGATGCAAAATACCAGGCATGACTGTGTGTACTGGCTGGTTTTG 741 seq1 TGTGTCAACCTGACACAGATGGAGTTATCACAGAGAAAGGAGTTTCAGTT 798 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGTGTCAACCTGACACAGATGGAGTTATCACAGAGAAAGGAGTTTCAGTT 791 seq1 GAGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTTTCAATTAGTG 848 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTTTCAATTAGTG 841 seq1 ATCGAGTGCAGAGGTCCCCTTGTGGGTGGTGCCATCCCTGGACTGGTTTC 898 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATCGAGTGCAGAGGTCCCCTTGTGGGTGGTGCCATCCCTGGACTGGTTTC 891 seq1 CTGGGTTTTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCCAACCAGT 948 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTGGGTTTTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCCAACCAGT 941 seq1 AAGGAACATCCCTCCATGGCCTCTGCATCACCTCCTGCTTCCTGACCTGC 998 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGGAACATCCCTCCATGGCCTCTGCATCACCTCCTGCTTCCTGACCTGC 991 seq1 TTGAATTC 1006 \|\|\|\|\|\|\|\| seq2 TTGAATTC 999

BAC End 1

BAC End 2

seq1: chr16_90791332_90792337
seq2: B6Ng01-163F11.g_70_1068 (reverse)

seq1  AGTGAACATGATCTTATTGCACACCAGAGGCACTGTGGTCACCATCACCA  50
      |||||||||||||||||| |||| |||||||||||| |||||||||| ||
seq2  AGTGAACATGATCTTATT-CACA-CAGAGGCACTGT-GTCACCATCA-CA  46

seq1  TCGCCAGGAGCCTTGGCAATGGGATAAACTCTCTGGTCCAAAAGGCCGGG  100
      |||||| ||||||||||||||||| ||||||||||   |||||| |||||
seq2  TCGCCA-GAGCCTTGGCAATGGGA-AAACTCTCTG--TCAAAAGCCCGGG  92

seq1  GAAATCTCTGGCTGGGCCTCATAGATCTACAAAAGGAAGAGAGAGACTGA  150
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  GAAATCTCTGGCTGAG-CTCATAGATCTACAAAAGGAAGAGAGAGACTGA  141

seq1  GTTACGGATGGAAGAAATACTATGTGTAAGTCCCCCAAATCCACTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACGGATGGAAGAAATACTATGTGTAAGTCCCCCAAATCCACTATATA  191

seq1  TCACTACACAAACTGCTAGGATGTCAAAGCTGGACCTCCATGAGAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACACAAACTGCTAGGATGTCAAAGCTGGACCTCCATGAGAATACT  241

seq1  AGACACACAGTAACCAAGCTACACCGTAAGAATTCAAGCCAGTCTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACAGTAACCAAGCTACACCGTAAGAATTCAAGCCAGTCTATAAC  291

seq1  ATCACACAAGCG-CCCCTTCAGCAGCATAGGGCTGGAGAGCAATAGAAGC  349
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCACACAAGCGCCCCCTTCAGCAGCATAGGGCTGGAGAGCAATAGAAGC  341

seq1  AGCTCCAGGACAGGCTGGCACAGGGCGGCTTTTCTATGCACGGCCAAGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAGGACAGGCTGGCACAGGGCGGCTTTTCTATGCACGGCCAAGGC  391

seq1  GAGCGCTTCTCACAGGCCTTAGGAGGCTGCGTTCACAGGTGCTCTAAGAA  449
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGCGATTCTCACAGGCCTTAGGAGACTGCGTTCACAGGTGCTCTAAGAA  441

seq1  AACCACGAGTCAACGGCCAGTCTGAGGCAG-AAGCCAACCATCATGGAAA  498
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACCACGAGTCAACGGCCAGTCTGAGGCAGAAAGCCAACCATCATGGAAA  491

seq1  TGTCCCCAACTGAAGACCATAAATCAGAGGAAGCTAAGCCACACTAGGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAACTGAAGACCATAAATCAGAGGAAGCTAAGCCACACTAGGTG  541

seq1  CCACTACTATAGTTCTACTTGATTCATTTATAGTTAAGTATGATCTACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACTATAGTTCTACTTGATTCATTTATAGTTAAGTATGATCTACAA  591

seq1  ATCCAAGATCCACAACTCTCTGAACACCAATATGATGTTCAAGTTTCATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGATCCACAACTCTCTGAACACCAATATGATGTTCAAGTTTCATA  641

seq1  TCTTAGAGCATTTCAAACTTCAGATTTCCAGAGCTGCCTCAGTAAGCAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGCATTTCAAACTTCAGATTTCCAGAGCTGCCTCAGTAAGCAAG  691

seq1  AGCACTGGATGCAAAATACCAGGCATGACTGTGTGTACTGGCTGGTTTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGATGCAAAATACCAGGCATGACTGTGTGTACTGGCTGGTTTTG  741

seq1  TGTGTCAACCTGACACAGATGGAGTTATCACAGAGAAAGGAGTTTCAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAACCTGACACAGATGGAGTTATCACAGAGAAAGGAGTTTCAGTT  791

seq1  GAGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTTTCAATTAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTTTCAATTAGTG  841

seq1  ATCGAGTGCAGAGGTCCCCTTGTGGGTGGTGCCATCCCTGGACTGGTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGTGCAGAGGTCCCCTTGTGGGTGGTGCCATCCCTGGACTGGTTTC  891

seq1  CTGGGTTTTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCCAACCAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCCAACCAGT  941

seq1  AAGGAACATCCCTCCATGGCCTCTGCATCACCTCCTGCTTCCTGACCTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATCCCTCCATGGCCTCTGCATCACCTCCTGCTTCCTGACCTGC  991

seq1  TTGAATTC  1006
      ||||||||
seq2  TTGAATTC  999

BAC Information

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Search Result

BAC

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BAC End Information

Alignment Information