BAC Information

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BAC

Clone NameB6Ng01-163N24
Chromosome16 (Build37)
Map Location 72,076,549 - 72,203,448
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163N24.bB6Ng01-163N24.g
ACCDH956350DH956351
length1,1361,191
definitionDH956350|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N24, 5' end.DH956351|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,076,549 - 72,077,676)(72,202,245 - 72,203,448)
sequence
gaattctttctaaaaaatataaatgaatgctgattacatactttgatgtt
agagtaaacataattacctgagtgaattttaataaattaatatatgtaga
ctacatctgggcatctttttacaattaattgccaggttttctctttgttt
tcttcaagagttttatgtatcccaaagagaatacattctttaatatttga
gtattacttcaaagtttcaaagctgttttaaattccaggttaagacccaa
tttagctgtctttaccttcatagagcaattctcttttttaaaatttaatt
taattgcttttctgagaaatgcctcaaggagcccaagttagctttaaact
ggcccagcaggcagtactgacttgaagacctgatcagtctgccttcttct
ctcaagcacttagatgatagatgtgccctgctttgtctgccctaagtatt
tctttaaaaatgatggtgttataatctgcaatttgagcattatcatcaaa
aaccttaagagccagaagaacagagagtgctctaagattgtgtcttctag
aaatgtctgaacttgcacccttaaagtctgaactgactaaacctgataag
aaaatgggccacacagatagacatggggatgtgtatggggatggagaggc
agggggaaattcccaggtcccaatcctacacaaacaatagccaactaaag
gatgctgagagtgggagcagactttccgatgggaaaactacattattatt
agtagtagtatctacgatctatagtatatccttagaagttgttttattac
tatgtttcttttgtagactagtagttttgagaacttctctgagcttttct
tttttttcttttgaatcaataataaaatatgataaaggtaattaaataac
acattggaacttgggcaacccaagccaacagaaggaaatgagacttagag
aagggcaaaggaatccaagacctacttgttttgcatacttagaaattctc
ataaaacactgaactagaaatctatattacatatggagaggacctggtgc
aagactggtgttcagcctgtgcataattagctgcccttggtgaatccaaa
tgagctttgcctactgatctggaagacctggttttc
gaattctatgtaaatgccatgctcgggtttagattttgcaatctctttaa
tcagaatcaagggaattacacagctgtttggaactcatgttaagatgtaa
ttaaacatctgattgaatttttgtacatattaagtagtggatgagagcgt
ttgtgcacaagacagaccatgcttattacaacttaaaaaagattcacttc
tgggtcaaaagcgtggagaggttagagtctcctatcataattttttctgt
aataaccaacattgtaaaaaacaaaccaatagattcatacatgctttgtc
ataatatgtaaaccaagtcaactaaattgaaatctgaaataatttacacc
tcattattagtattttctgtcacagaatcttttcaaaaggatataagctt
aaaatcaagctatctatgttattatgtaacttttctcagtgatttcctgt
attttcgctaagtaataagacatatgcaagtaaatgatgtttgaaaatta
attatttatgcataatatatttgggtgtatgctatatcatgttcaaggca
ttcatatggattttataagtctgcaatatttacagaaagcatgactgtaa
ctttagatcttatatataaaatgtacttagcgttctttgcatttgaagta
tttatattcagtgatgaagatgaaatgaataagtattttatatatgaaat
ataaatatcatgagttttactcagtcacattactcatggaaaaggaaaaa
ttgtttatttaaatggctgtagtttagaaaaaaataaatatcctaaatct
ttcagctttatgtaaagatttgcattgaggatcttaccattaattctttt
catctcatatcatatagcgaacaatttttcatgcttaatgagaggataaa
aatactccacagcacatgtgcccaattgtgcagtgaaattttatttcctg
gacttcttcagtgtaaaaagtgtctattaatcattatgttgattttacga
tgtgggctattgcccagaggattctgcatgatcaaagactatttttcatg
cactaagagctggacttgatatagagcctgaaagtgtaataattctttca
agaattgcctgttttccaatttctagtaatactgaattgagataaccgtt
accgttacctgcaagttacagaaaatgctctcattttcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72076549_72077676
seq2: B6Ng01-163N24.b_47_1182

seq1  GAATTCTTTCTAAAAAATATAAATGAATGCTGATTACATACTTTGATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAAAAAATATAAATGAATGCTGATTACATACTTTGATGTT  50

seq1  AGAGTAAACATAATTACCTGAGTGAATTTTAATAAATTAATATATGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAACATAATTACCTGAGTGAATTTTAATAAATTAATATATGTAGA  100

seq1  CTACATCTGGGCATCTTTTTACAATTAATTGCCAGGTTTTCTCTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTGGGCATCTTTTTACAATTAATTGCCAGGTTTTCTCTTTGTTT  150

seq1  TCTTCAAGAGTTTTATGTATCCCAAAGAGAATACATTCTTTAATATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGAGTTTTATGTATCCCAAAGAGAATACATTCTTTAATATTTGA  200

seq1  GTATTACTTCAAAGTTTCAAAGCTGTTTTAAATTCCAGGTTAAGACCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTTCAAAGTTTCAAAGCTGTTTTAAATTCCAGGTTAAGACCCAA  250

seq1  TTTAGCTGTCTTTACCTTCATAGAGCAATTCTCTTTTTTAAAATTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTCTTTACCTTCATAGAGCAATTCTCTTTTTTAAAATTTAATT  300

seq1  TAATTGCTTTTCTGAGAAATGCCTCAAGGAGCCCAAGTTAGCTTTAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTTTTCTGAGAAATGCCTCAAGGAGCCCAAGTTAGCTTTAAACT  350

seq1  GGCCCAGCAGGCAGTACTGACTTGAAGACCTGATCAGTCTGCCTTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCAGGCAGTACTGACTTGAAGACCTGATCAGTCTGCCTTCTTCT  400

seq1  CTCAAGCACTTAGATGATAGATGTGCCCTGCTTTGTCTGCCCTAAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCACTTAGATGATAGATGTGCCCTGCTTTGTCTGCCCTAAGTATT  450

seq1  TCTTTAAAAATGATGGTGTTATAATCTGCAATTTGAGCATTATCATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAATGATGGTGTTATAATCTGCAATTTGAGCATTATCATCAAA  500

seq1  AACCTTAAGAGCCAGAAGAACAGAGAGTGCTCTAAGATTGTGTCTTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAGAGCCAGAAGAACAGAGAGTGCTCTAAGATTGTGTCTTCTAG  550

seq1  AAATGTCTGAACTTGCACCCTTAAAGTCTGAACTGACTAAACCTGATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTGAACTTGCACCCTTAAAGTCTGAACTGACTAAACCTGATAAG  600

seq1  AAAATGGGCCACACAGATAGACATGGGGATGTGTATGGGGATGGAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGCCACACAGATAGACATGGGGATGTGTATGGGGATGGAGAGGC  650

seq1  AGGGGGAAATTCCCAGGTCCCAATCCTACACAAACAATAGCCAACTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAATTCCCAGGTCCCAATCCTACACAAACAATAGCCAACTAAAG  700

seq1  GATGCTGAGAGTGGGAGCAGAC-TTCCGATGGGAAAACTACATTATTATT  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GATGCTGAGAGTGGGAGCAGACTTTCCGATGGGAAAACTACATTATTATT  750

seq1  AGTAGTAGTATCTACGATCTATAGTATATCCTTAGAAGTTGTTTTATTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGTATCTACGATCTATAGTATATCCTTAGAAGTTGTTTTATTAC  800

seq1  TATGTTTCTTTTGTAGACTAGTAGTTTTGAGAACTTCTCTGAGCTTTTC-  848
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATGTTTCTTTTGTAGACTAGTAGTTTTGAGAACTTCTCTGAGCTTTTCT  850

seq1  TTTTTTTCTTTTGAATCAATAAATAAAATATGAT-AAGGTAATTAAATAA  897
      |||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  TTTTTTTCTTTTGAATCAAT-AATAAAATATGATAAAGGTAATTAAATAA  899

seq1  CACATTGGAAC-TGGGCAACCCAAGCCAACAGAAGGAAATGAGACTAAGA  946
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  CACATTGGAACTTGGGCAACCCAAGCCAACAGAAGGAAATGAGACTTAGA  949

seq1  GAA-GGCAAAGGAAACCAAGACCTACTTG-TTTGCATACTCAGAAA-TCT  993
      ||| |||||||||| |||||||||||||| |||||||||| ||||| |||
seq2  GAAGGGCAAAGGAATCCAAGACCTACTTGTTTTGCATACTTAGAAATTCT  999

seq1  CATAAAAACACTGAACTAG-AATCTATATTACATATGGAGAGGACCTGGT  1042
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAT-AAAACACTGAACTAGAAATCTATATTACATATGGAGAGGACCTGGT  1048

seq1  GC-AGACCTGTG-TCAGCCCTGTGCAT-ATTAGCTG-CCTTTGTGATTTC  1088
      || ||||  ||| |||| ||||||||| |||||||| |||| |||| | |
seq2  GCAAGACTGGTGTTCAG-CCTGTGCATAATTAGCTGCCCTTGGTGAATCC  1097

seq1  ATATGAGTTTTGCTTAGTTGATCTGGAAGACCTTGTTTTC  1128
      | ||||| ||||| ||  ||||||||||||||| ||||||
seq2  AAATGAGCTTTGCCTA-CTGATCTGGAAGACCTGGTTTTC  1136

seq1: chr16_72202245_72203448
seq2: B6Ng01-163N24.g_65_1255 (reverse)

seq1  TCTG-AAATG-TAGCATTTTCTGTAACTTATCAAGTAACGTTTACGTGTA  48
      |||| |||||  |||||||||||||||||  || |||||| | |||  ||
seq2  TCTGAAAATGAGAGCATTTTCTGTAACTT-GCAGGTAACGGTAACGGTTA  49

seq1  TACTACAATTTCAGTATCTACTTAGGAATTGTGAAAAACAGCCATATCTA  98
      | || ||| |||||||| ||| ||| |||  || ||||||| ||  ||| 
seq2  T-CT-CAA-TTCAGTAT-TAC-TAGAAAT--TGGAAAACAGGCAATTCT-  91

seq1  TGAAAGAATTATTACAACTTTCAAGCTCTATATTCAAGTCCAGCTCTGTG  148
      ||||||||||||||| ||||||| |||||||| |||||||||||||| | 
seq2  TGAAAGAATTATTAC-ACTTTCAGGCTCTATA-TCAAGTCCAGCTCT-TA  138

seq1  TTGCATGAAAAATTAGTCTTTGGATCATTGCAGAATTCCTCTGGGCAATA  198
       ||||||||||| |||||||| ||||| ||||||| ||||||||||||||
seq2  GTGCATGAAAAA-TAGTCTTT-GATCA-TGCAGAA-TCCTCTGGGCAATA  184

seq1  GCCCACATCGTAAAATCAACATAATGATTAATAGACACTTTTTACACTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATCGTAAAATCAACATAATGATTAATAGACACTTTTTACACTGA  234

seq1  AGAAGTCCAGGAAATAAAATTTCACTGCACAATTGGGCACATGTGCTGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCCAGGAAATAAAATTTCACTGCACAATTGGGCACATGTGCTGTG  284

seq1  GAGTA-TTTTATCCTCTCATTAAGCATGAAAAATTGTTCGCTATATGATA  347
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTTTATCCTCTCATTAAGCATGAAAAATTGTTCGCTATATGATA  334

seq1  TGAGATGAAAAGAATTAATGGTAAGATCCTCAATGCAAATCTTTACATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGAAAAGAATTAATGGTAAGATCCTCAATGCAAATCTTTACATAA  384

seq1  AGCTGAAAGATTTAGGATATTTATTTTTTTCTAAACTACAGCCATTTAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGATTTAGGATATTTATTTTTTTCTAAACTACAGCCATTTAAA  434

seq1  TAAACAATTTTTCCTTTTCCATGAGTAATGTGACTGAGTAAAACTCATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATTTTTCCTTTTCCATGAGTAATGTGACTGAGTAAAACTCATGA  484

seq1  TATTTATATTTCATATATAAAATACTTATTCATTTCATCTTCATCACTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATTTCATATATAAAATACTTATTCATTTCATCTTCATCACTGA  534

seq1  ATATAAATACTTCAAATGCAAAGAACGCTAAGTACATTTTATATATAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATACTTCAAATGCAAAGAACGCTAAGTACATTTTATATATAAGA  584

seq1  TCTAAAGTTACAGTCATGCTTTCTGTAAATATTGCAGACTTATAAAATCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTTACAGTCATGCTTTCTGTAAATATTGCAGACTTATAAAATCC  634

seq1  ATATGAATGCCTTGAACATGATATAGCATACACCCAAATATATTATGCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATGCCTTGAACATGATATAGCATACACCCAAATATATTATGCAT  684

seq1  AAATAATTAATTTTCAAACATCATTTACTTGCATATGTCTTATTACTTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTAATTTTCAAACATCATTTACTTGCATATGTCTTATTACTTAG  734

seq1  CGAAAATACAGGAAATCACTGAGAAAAGTTACATAATAACATAGATAGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATACAGGAAATCACTGAGAAAAGTTACATAATAACATAGATAGCT  784

seq1  TGATTTTAAGCTTATATCCTTTTGAAAAGATTCTGTGACAGAAAATACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAAGCTTATATCCTTTTGAAAAGATTCTGTGACAGAAAATACTA  834

seq1  ATAATGAGGTGTAAATTATTTCAGATTTCAATTTAGTTGACTTGGTTTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGGTGTAAATTATTTCAGATTTCAATTTAGTTGACTTGGTTTAC  884

seq1  ATATTATGACAAAGCATGTATGAATCTATTGGTTTGTTTTTTACAATGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGACAAAGCATGTATGAATCTATTGGTTTGTTTTTTACAATGTT  934

seq1  GGTTATTACAGAAAAAATTATGATAGGAGACTCTAACCTCTCCACGCTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTACAGAAAAAATTATGATAGGAGACTCTAACCTCTCCACGCTTT  984

seq1  TGACCCAGAAGTGAATCTTTTTTAAGTTGTAATAAGCATGGTCTGTCTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGAAGTGAATCTTTTTTAAGTTGTAATAAGCATGGTCTGTCTTG  1034

seq1  TGCACAAACGCTCTCATCCACTACTTAATATGTACAAAAATTCAATCAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAACGCTCTCATCCACTACTTAATATGTACAAAAATTCAATCAGA  1084

seq1  TGTTTAATTACATCTTAACATGAGTTCCAAACAGCTGTGTAATTCCCTTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTACATCTTAACATGAGTTCCAAACAGCTGTGTAATTCCCTTG  1134

seq1  ATTCTGATTAAAGAGATTGCAAAATCTAAACCCGAGCATGGCATTTACAT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATTAAAGAGATTGCAAAATCTAAACCCGAGCATGGCATTTACAT  1184

seq1  AGAATTC  1204
      |||||||
seq2  AGAATTC  1191