BAC Information

Click to search

BAC

Clone NameB6Ng01-164M18
Chromosome16 (Build37)
Map Location 50,166,159 - 50,353,549
singlet/doubletdoublet
Overlap geneBbx
Upstream geneMyh15, 1700026J12Rik, LOC386061, EG216818, LOC628903, Ift57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404
Downstream geneLOC100043414, Ccdc54, LOC672778, 5330426P16Rik, EG639820
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M18.bB6Ng01-164M18.g
ACCDH957027DH957028
length1,0581,054
definitionDH957027|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M18, 5' end.DH957028|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,352,505 - 50,353,549)(50,166,159 - 50,167,214)
sequence
gaattccttggtgtgtttcttcggtccagaaagctgtatcaggtctgtca
cctagcatctttttagaatgtgtgtgtgtgtgtgtgtgtgtgtgttgata
atgggaacaaatcactatgtagctcagatctatgctgtccttaaactcag
cattttctctcagccttctaggtatttgtctagctttttaaaaaattgta
tttagtgaaaataataggtacacatatatttccccaccattctggaagtg
gaattccctcacctccttttcaatatagcaaagaaaatcaaatcacttta
taggcagattatagagaacatagcttagaatttcaggtagaattattaac
attgcagtggatctttgaaagacagaaggagtctcctttcaagcaattta
ggtatctttctgctgaagacctgagttgctgcctgatgacagcagtgagt
gacatggtgttctttgatttttctctccatgtgctattttggtcctggtt
ttgtacatacattagaaagagaaatttactgggtaggattacacctttgt
aagtcacttcagcaccatagcagttcactcagtttcactagcattgaggt
caatggaccaaatacatctggtcagccaacggaagcagtgcacccttata
aatgcttttatttttttaaatattccagaaatttagctttctggtttttt
ttttttaactttgggctttgaaagcttttgtagttagttttaagtaaagt
tgactgtatagctccatgaacctaaaaatgtatagtttgtcatatgaaat
taaatccaataaatgtcaaattttaaagactttaattaactcttcatccc
agattctatcacactgtttcgtgtgtagtcactctgcccttcagccctca
cgctgagtacccgttgtctgatgttcctgactatggagtgggtttcatgt
cctatgacctgaaacaacatgggattgtaagcttcttccatctggctctt
ccttcataatagtattgagatttagccaagcttttgcataaatctgggag
tctaattt
gaattctcttttcacaatgagaatgcatgctgcagggtagtcgcaggcct
gtgtgtgactcattcatcagcaggtaaccgtggccaggatggtggctata
ggaatatttagcgaaccttcaaagccacatgcaaagtcacttctgcaccc
cgatttaaatgctacctttatcccagctgccctcctgctgctgcctgaga
tgaaggagagggtataacccaggatgtgttgaatcagctgctgtgacaag
agagatagcaaatgtgacgcagaaggtgaaaggcacagggcttacaaatc
agtctgtaagatggtttcttctgtggacagagcacccggcatcatgtggt
gagcgtccatcttcctaagctcctttggttcttgggaatgcggatgggcg
ataaggcctcagaccgaggactcgctggtgtatgtttaggaagaagaaaa
ctgatacctttctagtttggtaatgaaggggattgaaatgcactgtatca
gccatcttctaaggatgcaaggaaggatgtggattaacctggagccatct
acaagccgtgtgaaaactatgcttaaaaatgtctgagtgttatgagctga
tgcgagttaagcatattaagataatctgagatgctggcgtatcgttttag
ctgaagaaaatgtgaaagtgtgcagcagactcctttaagaaggaaacttt
ccagagaagatggcctcacttattaaaaagcatgaccggaaacaatgaga
aagtttaagctttgctctgtggtgcttatttctccaagcggcgggagatg
ctcagcatagccttgggcttctttctgacagagccctcgcccaagccgcg
tggctggggtttcagcacccagggcacccagactatcctcattctaaatt
cttttgttcttttgatacatatgatgttctgtctgtcttcagtctctgtc
tctgtctctgtctttctggctccctttctccctcctttactttccctgcc
tccatcccttggtctctttcctccctttccctccctgtcccctcccctcc
ccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50352505_50353549
seq2: B6Ng01-164M18.b_46_1103 (reverse)

seq1  AAATTAGACT-CCAGATATATGCAAAAGCTTGGCTAAATCTCAATACTA-  48
      |||||||||| |||||| ||||||||||||||||||||||||||||||| 
seq2  AAATTAGACTCCCAGATTTATGCAAAAGCTTGGCTAAATCTCAATACTAT  50

seq1  TATGAAGGAAAAGAAGCCAGTTGGAAG-AGCTTAC-ATACCATG-TGGTT  95
      ||||||||||    |||||| |||||| ||||||| || ||||| || ||
seq2  TATGAAGGAA---GAGCCAGATGGAAGAAGCTTACAATCCCATGTTGTTT  97

seq1  CAGTTCATAGGACATGAAA-CCACT-CATAGTCAGGAACATCAGACAACG  143
      ||| ||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  CAGGTCATAGGACATGAAACCCACTCCATAGTCAGGAACATCAGACAACG  147

seq1  GTTACTCAGCGTGAGGGCTG-AGGGCAGAGTGACTACACACG-AACAGTG  191
      | |||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  GGTACTCAGCGTGAGGGCTGAAGGGCAGAGTGACTACACACGAAACAGTG  197

seq1  TGATAGAATCT-GGATGA--GGTTAATTAAAGTCTTT-AAATTTGACATT  237
      ||||||||||| ||||||   |||||||||||||||| ||||||||||||
seq2  TGATAGAATCTGGGATGAAGAGTTAATTAAAGTCTTTAAAATTTGACATT  247

seq1  TATTGGA-TTAATTTCATATGAC-AACTATACATTTTTAGGTTCATGGAG  285
      ||||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  TATTGGATTTAATTTCATATGACAAACTATACATTTTTAGGTTCATGGAG  297

seq1  CTATACAGTCAACTTTACTTAAAACTAACTACAAAAGCTTTCAAAGCCCA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGTCAACTTTACTTAAAACTAACTACAAAAGCTTTCAAAGCCCA  347

seq1  AAGTTAAAAAAAAAAAACCAGAAAGCTAAATTTCTGGAATATTT-AAAAA  384
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGTTAAAAAAAAAAAACCAGAAAGCTAAATTTCTGGAATATTTAAAAAA  397

seq1  ATAAAAGCATTTATAAGGGTGCACTGCTTCCGTTGGCTGACCAGATGTAT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCATTTATAAGGGTGCACTGCTTCCGTTGGCTGACCAGATGTAT  447

seq1  TTGGTCCATTGACCTCAATGCTAGTGAAACTGAGTGAACTGCTATGGTGC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCATTGACCTCAATGCTAGTGAAACTGAGTGAACTGCTATGGTGC  497

seq1  TGAAGTGACTTACAAAGGTGTAATCCTACCCAGTAAATTTCTCTTTCTAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGACTTACAAAGGTGTAATCCTACCCAGTAAATTTCTCTTTCTAA  547

seq1  TGTATGTACAAAACCAGGACCAAAATAGCACATGGAGAGAAAAATCAAAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTACAAAACCAGGACCAAAATAGCACATGGAGAGAAAAATCAAAG  597

seq1  AACACCATGTCACTCACTGCTGTCATCAGGCAGCAACTCAGGTCTTCAGC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGTCACTCACTGCTGTCATCAGGCAGCAACTCAGGTCTTCAGC  647

seq1  AGAAAGATACCTAAATTGCTTGAAAGGAGACTCCTTCTGTCTTTCAAAGA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATACCTAAATTGCTTGAAAGGAGACTCCTTCTGTCTTTCAAAGA  697

seq1  TCCACTGCAATGTTAATAATTCTACCTGAAATTCTAAGCTATGTTCTCTA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCAATGTTAATAATTCTACCTGAAATTCTAAGCTATGTTCTCTA  747

seq1  TAATCTGCCTATAAAGTGATTTGATTTTCTTTGCTATATTGAAAAGGAGG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGCCTATAAAGTGATTTGATTTTCTTTGCTATATTGAAAAGGAGG  797

seq1  TGAGGGAATTCCACTTCCAGAATGGTGGGGAAATATATGTGTACCTATTA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAATTCCACTTCCAGAATGGTGGGGAAATATATGTGTACCTATTA  847

seq1  TTTTCACTAAATACAATTTTTTAAAAAGCTAGACAAATACCTAGAAGGCT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTAAATACAATTTTTTAAAAAGCTAGACAAATACCTAGAAGGCT  897

seq1  GAGAGAAAATGCTGAGTTTAAGGACAGCATAGATCTGAGCTACATAGTGA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAATGCTGAGTTTAAGGACAGCATAGATCTGAGCTACATAGTGA  947

seq1  TTTGTTCCCATTATCAACACACACACACACACACACACACACATTCTAAA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCCATTATCAACACACACACACACACACACACACACATTCTAAA  997

seq1  AAGATGCTAGGTGACAGACCTGATACAGCTTTCTGGACCGAAGAAACACA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTAGGTGACAGACCTGATACAGCTTTCTGGACCGAAGAAACACA  1047

seq1  CCAAGGAATTC  1045
      |||||||||||
seq2  CCAAGGAATTC  1058

seq1: chr16_50166159_50167214
seq2: B6Ng01-164M18.g_70_1123

seq1  GAATTCTCTTTTCACAATGAGAATGCATGCTGCAGGGTAGTCGCAGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTCACAATGAGAATGCATGCTGCAGGGTAGTCGCAGGCCT  50

seq1  GTGTGTGACTCATTCATCAGCAGGTAACCGTGGCCAGGATGGTGGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACTCATTCATCAGCAGGTAACCGTGGCCAGGATGGTGGCTATA  100

seq1  GGAATATTTAGCGAACCTTCAAAGCCACATGCAAAGTCACTTCTGCACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTAGCGAACCTTCAAAGCCACATGCAAAGTCACTTCTGCACCC  150

seq1  CGATTTAAATGCTACCTTTATCCCAGCTGCCCTCCTGCTGCTGCCTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTAAATGCTACCTTTATCCCAGCTGCCCTCCTGCTGCTGCCTGAGA  200

seq1  TGAAGGAGAGGGTATAACCCAGGATGTGTTGAATCAGCTGCTGTGACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGAGGGTATAACCCAGGATGTGTTGAATCAGCTGCTGTGACAAG  250

seq1  AGAGATAGCAAATGTGACGCAGAAGGTGAAAGGCACAGGGCTTACAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGCAAATGTGACGCAGAAGGTGAAAGGCACAGGGCTTACAAATC  300

seq1  AGTCTGTAAGATGGTTTCTTCTGTGGACAGAGCACCCGGCATCATGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTAAGATGGTTTCTTCTGTGGACAGAGCACCCGGCATCATGTGGT  350

seq1  GAGCGTCCATCTTCCTAAGCTCCTTTGGTTCTTGGGAATGCGGATGGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGTCCATCTTCCTAAGCTCCTTTGGTTCTTGGGAATGCGGATGGGCG  400

seq1  ATAAGGCCTCAGACCGAGGACTCGCTGGTGTATGTTTAGGAAGAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCCTCAGACCGAGGACTCGCTGGTGTATGTTTAGGAAGAAGAAAA  450

seq1  CTGATACCTTTCTAGTTTGGTAATGAAGGGGATTGAAATGCACTGTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACCTTTCTAGTTTGGTAATGAAGGGGATTGAAATGCACTGTATCA  500

seq1  GCCATCTTCTAAGGATGCAAGGAAGGATGTGGATTAACCTGGAGCCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTCTAAGGATGCAAGGAAGGATGTGGATTAACCTGGAGCCATCT  550

seq1  ACAAGCCGTGTGAAAACTATGCTTAAAAATGTCTGAGTGTTATGAGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCGTGTGAAAACTATGCTTAAAAATGTCTGAGTGTTATGAGCTGA  600

seq1  TGCGAGTTAAGCATATTAAGATAATCTGAGATGCTGGCGTATCGTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTTAAGCATATTAAGATAATCTGAGATGCTGGCGTATCGTTTTAG  650

seq1  CTGAAGAAAATGTGAAAGTGTGCAGCAGACTCCTTTAAGAAGGAAACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGAAGAAAATGTGAAAGTGTGCAGCAGACTCCTTTAAGAAGGAAACTTT  700

seq1  CCAGAGAAGATGGCCTCACTTATTAAAAAGCATGACCGGAAACAATGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAAGATGGCCTCACTTATTAAAAAGCATGACCGGAAACAATGAGA  750

seq1  AAGTTTAAGCTTTGCTCTGTGGTGCTTATTTCTCCAAGCGGCGGGAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAGCTTTGCTCTGTGGTGCTTATTTCTCCAAGCGGCGGGAGATG  800

seq1  CTCAGCATAGCCTTGGGCTTCTTTCTGACAGAGCCCTCGCCCAAGCCGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATAGCCTTGGGCTTCTTTCTGACAGAGCCCTCGCCCAAGCCGCG  850

seq1  TGGCTGGGGTTTCAGCACCCA-GGCACCCAGACTATCCTCATTCTAAATT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGGCTGGGGTTTCAGCACCCAGGGCACCCAGACTATCCTCATTCTAAATT  900

seq1  CTTTTGTTCTTTTGATACATATGATGTTCTGTCTGTCTTTCAGTCTCTGT  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTTTGTTCTTTTGATACATATGATGTTCTGTCTGTC-TTCAGTCTCTGT  949

seq1  CTCTGTCTCTGTCTTTCTGGCTCCCTTCCTCCCTCCTTTCCTTTCCCTGC  999
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  CTCTGTCTCTGTCTTTCTGGCTCCCTTTCTCCCTCCTTTACTTTCCCTGC  999

seq1  CTCCTTCCCTTGTTCTCTTTCCCTCCCTTTCCCTCCCTGTCCCCTCCCCC  1049
      |||| ||||||| ||||||| |||||||||||||||||||||||| ||||
seq2  CTCCATCCCTTGGTCTCTTT-CCTCCCTTTCCCTCCCTGTCCCCT-CCCC  1047

seq1  TCCCCCT  1056
      |||||||
seq2  TCCCCCT  1054