BAC Information

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BAC

Clone NameB6Ng01-166D10
Chromosome16 (Build37)
Map Location 6,898,043 - 7,041,971
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166D10.bB6Ng01-166D10.g
ACCDH958054DH958055
length1,059359
definitionDH958054|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D10, 5' end.DH958055|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,040,911 - 7,041,971)(6,898,043 - 6,898,401)
sequence
gaattctgtagtgggaaccttggacctagatgttacacccatccttttca
caaccagagtggcatcttgctcaaagtcactatcttcctccctacgttct
ccttaaatgaacaaaccagtttaatgacgaaggcgcaaatacaaattaat
taaaacacatacgtaccggaaacgcaggaggcatcgagagtacccatagc
attctacgtgttagataacaccattgcaattgattcacaaagatgaaagg
cataaatataggataaaaaagctctgattattctaataatttgattcagt
ccgattgaggtttagcaactgaagcaatgcttactgggatgttcttgtgg
tgggtaactgatggaaacacacaggcacttgacacacattcacagctgag
gcaaagaaatggcagaggctggtgaatcatatattatcaatacattccta
agagaaggttcctggtatgatttactaaacaggaaacaaaataaaacaaa
tacttacaagaataaaccaatttattggcacaatgctatttaaaagactg
ttctcaagagagagagagagagagagagagagagagatagagagagagag
agagagagagagagagagactagcctcagtaaatgtgtggaagaaacatt
ggttttttttctggaggcaaccaaactgataacaaattacccaaatgttc
aaactagaaccccggcattttatgaagacatatattcctgtagcacagat
tggagttggacactttggaggaaaaggggccctctcaattttcgcaaagg
agttttggttaacacatacacattaaccaagcatacccttgaagtgaatt
catagaaaggcaggcaaaagattaccccagtgagaacttcacaggacagg
actcaggcccttgggagtcagatcttggattctcagcagcagacaaatcc
agctattcttgtcacctcacagcccaggacccgtcccatgaccacagctg
gcctgcctcctcgaaggcagtgctagacagtttccaaagctcaggggtga
tgagttagg

agcagcctcaggctctcggtgcagacaggctctgagtgtgttgtagcaga
gcgaccccagggtcaactattccattcctcctcctgcacaggtagacagc
cagcaactctgcatgtgcttaaaatgagttcgacctgctgtgttcctttg
aaggaggaaggaacataggcatacctcgagccatattgctcactgccttt
cttggttcatggagtggttttagagaaggtaatgtctggtccactggccc
tacagttgttcttttcttctggaggagtcccttccttatgatgggaagca
gtattttaaaactctggaattctttttccagtgtgtgcgtgtgtgtgtgt
gtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7040911_7041971
seq2: B6Ng01-166D10.b_50_1108 (reverse)

seq1  CCTAACTCACTACCCCTGGGCTTTGGAAACTGTCTAGCACTGCCCTTCGG  50
      |||||||||  ||||||| ||||||||||||||||||||||| |||||| 
seq2  CCTAACTCATCACCCCTGAGCTTTGGAAACTGTCTAGCACTG-CCTTCGA  49

seq1  GGAGGCAGGCCAGCTGT-GTCATGGGGCGGGGTCTGTGGCTGTGAGGTGA  99
      ||||||||||||||||| |||||||| ||||  ||| |||||||||||||
seq2  GGAGGCAGGCCAGCTGTGGTCATGGGACGGGTCCTG-GGCTGTGAGGTGA  98

seq1  CAAGATTAGCTGGGTTTTGTCTGCTGCTGAGAATCCAAGATCTGACTCCC  149
      ||||| ||||| || |||||||||||||||||||||||||||||||||||
seq2  CAAGAATAGCT-GGATTTGTCTGCTGCTGAGAATCCAAGATCTGACTCCC  147

seq1  AAGGGCCTGTGTCCTGTCCTGTGAAGTTCTCACTGGGGTAATCCTTTTGC  199
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  AAGGGCCTGAGTCCTGTCCTGTGAAGTTCTCACTGGGGTAAT-CTTTTGC  196

seq1  CTGCCTTTCTATGAATTCACTTCAAGGGTATGCTTGGTTAATGTGTATGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTCTATGAATTCACTTCAAGGGTATGCTTGGTTAATGTGTATGT  246

seq1  GTTAACC-AAACTCCTTTGCGAAAATTGAGAGGGCCCCTTTTCCTCCAAA  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCAAAACTCCTTTGCGAAAATTGAGAGGGCCCCTTTTCCTCCAAA  296

seq1  GTGTCCAACTCCAATCTGTGCTACAGGAATATATGTCTTCATAAAATGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAACTCCAATCTGTGCTACAGGAATATATGTCTTCATAAAATGCC  346

seq1  GGGGTTCTAGTTTGAACATTTGGGTAATTTGTTATCAGTTTGGTTGCCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCTAGTTTGAACATTTGGGTAATTTGTTATCAGTTTGGTTGCCTC  396

seq1  CAGAAAAAAAACCAATGTTTCTTCCACACATTTACTGAGGCTAGTCTCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAAACCAATGTTTCTTCCACACATTTACTGAGGCTAGTCTCTC  446

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTC  496

seq1  TCTCTCTTGAGAACAGTCTTTTAAATAGCATTGTGCCAATAAATTGGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTGAGAACAGTCTTTTAAATAGCATTGTGCCAATAAATTGGTTT  546

seq1  ATTCTTGTAAGTATTTGTTTTATTTTGTTTCCTGTTTAGTAAATCATACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTAAGTATTTGTTTTATTTTGTTTCCTGTTTAGTAAATCATACC  596

seq1  AGGAACCTTCTCTTAGGAATGTATTGATAATATATGATTCACCAGCCTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTTCTCTTAGGAATGTATTGATAATATATGATTCACCAGCCTCT  646

seq1  GCCATTTCTTTGCCTCAGCTGTGAATGTGTGTCAAGTGCCTGTGTGTTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTCTTTGCCTCAGCTGTGAATGTGTGTCAAGTGCCTGTGTGTTTC  696

seq1  CATCAGTTACCCACCACAAGAACATCCCAGTAAGCATTGCTTCAGTTGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTACCCACCACAAGAACATCCCAGTAAGCATTGCTTCAGTTGCT  746

seq1  AAACCTCAATCGGACTGAATCAAATTATTAGAATAATCAGAGCTTTTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAATCGGACTGAATCAAATTATTAGAATAATCAGAGCTTTTTTA  796

seq1  TCCTATATTTATGCCTTTCATCTTTGTGAATCAATTGCAATGGTGTTATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATTTATGCCTTTCATCTTTGTGAATCAATTGCAATGGTGTTATC  846

seq1  TAACACGTAGAATGCTATGGGTACTCTCGATGCCTCCTGCGTTTCCGGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACGTAGAATGCTATGGGTACTCTCGATGCCTCCTGCGTTTCCGGTA  896

seq1  CGTATGTGTTTTAATTAATTTGTATTTGCGCCTTCGTCATTAAACTGGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGTGTTTTAATTAATTTGTATTTGCGCCTTCGTCATTAAACTGGTT  946

seq1  TGTTCATTTAAGGAGAACGTAGGGAGGAAGATAGTGACTTTGAGCAAGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTAAGGAGAACGTAGGGAGGAAGATAGTGACTTTGAGCAAGAT  996

seq1  GCCACTCTGGTTGTGAAAAGGATGGGTGTAACATCTAGGTCCAAGGTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCTGGTTGTGAAAAGGATGGGTGTAACATCTAGGTCCAAGGTTCC  1046

seq1  CACTACAGAATTC  1061
      |||||||||||||
seq2  CACTACAGAATTC  1059


seq1: chr16_6898043_6898401
seq2: B6Ng01-166D10.g_75_433

seq1  AGCAGCCTCAGGCTCTCGGTGCAGACAGGCTCTGAGTGTGTTGTAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTCAGGCTCTCGGTGCAGACAGGCTCTGAGTGTGTTGTAGCAGA  50

seq1  GCGACCCCAGGGTCAACTATTCCATTCCTCCTCCTGCACAGGTAGACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACCCCAGGGTCAACTATTCCATTCCTCCTCCTGCACAGGTAGACAGC  100

seq1  CAGCAACTCTGCATGTGCTTAAAATGAGTTCGACCTGCTGTGTTCCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTCTGCATGTGCTTAAAATGAGTTCGACCTGCTGTGTTCCTTTG  150

seq1  AAGGAGGAAGGAACATAGGCATACCTCGAGCCATATTGCTCACTGCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAAGGAACATAGGCATACCTCGAGCCATATTGCTCACTGCCTTT  200

seq1  CTTGGTTCATGGAGTGGTTTTAGAGAAGGTAATGTCTGGTCCACTGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTCATGGAGTGGTTTTAGAGAAGGTAATGTCTGGTCCACTGGCCC  250

seq1  TACAGTTGTTCTTTTCTTCTGGAGGAGTCCCTTCCTTATGATGGGAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGTTCTTTTCTTCTGGAGGAGTCCCTTCCTTATGATGGGAAGCA  300

seq1  GTATTTTAAAACTCTGGAATTCTTTTTCCAGTGTGTGCGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAAACTCTGGAATTCTTTTTCCAGTGTGTGCGTGTGTGTGTGT  350

seq1  GTGTGTGTG  359
      |||||||||
seq2  GTGTGTGTG  359


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