BAC Information

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BAC

Clone NameB6Ng01-166F24
Chromosome16 (Build37)
Map Location 66,273,950 - 66,275,078
singlet/doubletsinglet
Overlap genenone
Upstream genePou1f1, Chmp2b, EG383186, Vgll3, LOC664846, LOC100039035
Downstream geneCadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F24.bB6Ng01-166F24.g
ACCDH958175DH958176
length1,2311,115
definitionDH958175|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F24, 5' end.DH958176|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgccggcgagatactagctcggggaagaagtggcaccaagaaa
cccaggaatttatcatcaccaggcgctgataggagacccccgtttcacgg
ggagggttcagaactacgggactttacagctttacaaggtatgtctggcc
ttgaactttctccagcattagaagcctttttgttccttttcacagggctc
tttccttttctttttgattgcatactgtttccaccaatactgtggaattg
ctaactggtgttcagtcgaggtcaggcactgttagaaaagggatcagatt
gtgcttaaaagacgaggaatgtcagcaagtggttaaggcagggcagaaaa
ttctagatgaaattcaagacagtctatcagaggtacaccagggagagaga
ttgggagcaaagaggacacatggtgcatcaattaagcatacaggcctttc
cacggaccttgagcccaaggaaaagataatgtcggggaagaatacctggg
gtgagtttggaaggaaggagaagaaaaaagagaagaagaaagatcaatca
gctgaggtccctaggagaaggaacctatacccgccactagatgcgtttaa
ggacctagctcttagtagctcagaatcagatgaaggacttagctcctctg
aggaaatggacttggaggaggaagcagctcgttatgagggagaaaggtac
cagcaagataaaatgcaagctaatcagtccagaaaaaggccaaaagcggc
tggcaaaagccagcttgctgttcggcctccggactgtcggcttcagggtc
ctaatgcacatatgccttatgtgcagaggcattattcagattcattcatt
ccagaagaggaacagaggaaaatgcaacaggcttttccagtttttgaagg
agccaagggagggtgagttcatgctccggtagagtatatacagattaagg
agctccctgagcagtccataattatggagtcagtgctaatttcactgtag
cacaagtcgaaaggcttgtgactcacactatgactccttgtgattgcaga
ctgtagttaaaagcttcagcctcagttatgggaatgttatcttgagtgga
aagctgtgcaagacttctggcagattgcaggccaaggctatgccaccgat
ggaaggggacaaagaactgacgttgatggctaccggtcagtacagacttg
tctctctaacccaccaggataactgacgtag
gaattcccttctcagtacattcatggctatgttctctattttcatcatag
ccgtatattgtactttggcgcacaatattttcccttgtggttgaatgcaa
aacagctgtgtattctgccttctgttgttgggttgggtgctgactaaata
atctaagacagcctaaattttgagttgttcctcactaaaagggacaggca
gtgctaaaaaaggaatctatttaaaaaacaggtcttttgttttttggttt
tttgttctttttttgtttttgttttttgtttttatttttttcagtatatt
gagggtatagatgcagctggagattaagccagaggcttcagatatcctaa
gcacatattttaacattaaagccctaactcagtatttttaatgtctttga
aaacaagttttggttttacagatatttattcattcattttattttgtttg
catttgatcccttggaactgtagttactggtggttgtgagttaccatgtt
ggtactaggatctgaaaccagtttctattgcaagagctgtttgagatatt
tttctagactaagaaaacaaattctctaaataaatatagatatgaactct
cttaaacatttccatgcaatacttttttaagctagcagtatttatccagc
aaatgtccacaatttttaataaataagatgtcacaaaatagtataagact
tattaccattctctaattgttgagttggttgaatctaatttttaaatttg
gatataaagtatgttcaaattttatccatgaatatgataaatcaatacag
ttatcaacccaatacatttcttttacatttacatttatttcacctattta
tttatttgtctgtatgtgtgtgcatgtgtatgaatattgatacattttgt
catgggggactttcagacatcttttttttaccctttgcaccatgtgaatc
aaacacatgtcctcagttttagtgtcaacacctttacccactagcatctc
aatccaaaggataaatatattttctactattgtagaagaagtatgaatgc
ttaaataaattataaaaggaacattacatgttcttttctacatggaatgt
ggggttacttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66273950_66275078
seq2: B6Ng01-166F24.g_66_1180

seq1  GAATTCCCTTCTCAGTACATTCATGGCTATGTTCTCTATTTTCATCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCTCAGTACATTCATGGCTATGTTCTCTATTTTCATCATAG  50

seq1  CCGTATATTGTACTTTGGCGCACAATATTTTCCCTTGTGGTTGAATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATATTGTACTTTGGCGCACAATATTTTCCCTTGTGGTTGAATGCAA  100

seq1  AACAGCTGTGTATTCTGCCTTCTGTTGTTGGGTTGGGTGCTGACTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGTGTATTCTGCCTTCTGTTGTTGGGTTGGGTGCTGACTAAATA  150

seq1  ATCTAAGACAGCCTAAATTTTGAGTTGTTCCTCACTAAAAGGGACAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGACAGCCTAAATTTTGAGTTGTTCCTCACTAAAAGGGACAGGCA  200

seq1  GTGCTAAAAAAGGAATCTATTTAAAAAACAGGTCTTTTGTTTTTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAAAAAGGAATCTATTTAAAAAACAGGTCTTTTGTTTTTTGGTTT  250

seq1  TTTGTTCTTTTTTTGTTTTTGTTTTTTGTTTTTATTTTTTTCAGTATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTTTTGTTTTTGTTTTTTGTTTTTATTTTTTTCAGTATATT  300

seq1  GAGGGTATAGATGCAGCTGGAGATTAAGCCAGAGGCTTCAGATATCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTATAGATGCAGCTGGAGATTAAGCCAGAGGCTTCAGATATCCTAA  350

seq1  GCACATATTTTAACATTAAAGCCCTAACTCAGTATTTTTAATGTCTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATATTTTAACATTAAAGCCCTAACTCAGTATTTTTAATGTCTTTGA  400

seq1  AAACAAGTTTTGGTTTTACAGATATTTATTCATTCATTTTATTTTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTTTGGTTTTACAGATATTTATTCATTCATTTTATTTTGTTTG  450

seq1  CATTTGATCCCTTGGAACTGTAGTTACTGGTGGTTGTGAGTTACCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATCCCTTGGAACTGTAGTTACTGGTGGTTGTGAGTTACCATGTT  500

seq1  GGTACTAGGATCTGAAACCAGTTTCTATTGCAAGAGCTGTTTGAGATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTAGGATCTGAAACCAGTTTCTATTGCAAGAGCTGTTTGAGATATT  550

seq1  TTTCTAGACTAAGAAAACAAATTCTCTAAATAAATATAGATATGAACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGACTAAGAAAACAAATTCTCTAAATAAATATAGATATGAACTCT  600

seq1  CTTAAACATTTCCATGCAATACTTTTTTAAGCTAGCAGTATTTATCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACATTTCCATGCAATACTTTTTTAAGCTAGCAGTATTTATCCAGC  650

seq1  AAATGTCCACAATTTTTAATAAATAAGATGTCACAAAATAGTATAAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCACAATTTTTAATAAATAAGATGTCACAAAATAGTATAAGACT  700

seq1  TATTACCATTCTCTAATTGTTGAGTTGGTTGAATCTAATTTTTAAATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCATTCTCTAATTGTTGAGTTGGTTGAATCTAATTTTTAAATTTG  750

seq1  GATATAAAGTATGTTCAAATTTTATCCATGAATATGATAAATCAATACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAGTATGTTCAAATTTTATCCATGAATATGATAAATCAATACAG  800

seq1  TTATCAACCCAATACATTTCTTTTACATTTACATTTATTTCACCTATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACCCAATACATTTCTTTTACATTTACATTTATTTCACCTATTTA  850

seq1  TTTATTTGTCTGTATGTGTGTGCATGTGTATGAATATTGATACATTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTCTGTATGTGTGTGCATGTGTATGAATATTGATACATTTTGT  900

seq1  CATGGGGGACTTTCAGACATCTTTTTTTTACCCTTTGCACCATGTGAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGGACTTTCAGACATCTTTTTTTTACCCTTTGCACCATGTGAATC  950

seq1  AAACACATGTCCTCAGTTTTAGTGTCAAACACCTTTACCCACTAAGCAAT  1000
      |||||||||||||||||||||||||| |||||||||||||||| ||| ||
seq2  AAACACATGTCCTCAGTTTTAGTGTC-AACACCTTTACCCACT-AGC-AT  997

seq1  CTCAAATCCAAAGGATAAATATATTTCTAACTATGTTAGAAGAAAGTAAT  1050
      ||| ||||||||||||||||||||||   |||||  |||||| |||| ||
seq2  CTC-AATCCAAAGGATAAATATATTTTCTACTATTGTAGAAG-AAGT-AT  1044

seq1  GAATTGCTAAAATAAAATTAAATAAAAGAACAATTACATGTTCTTTTCTA  1100
      ||| |||| ||||||| |   ||||||| |  ||||||||||||||||||
seq2  GAA-TGCTTAAATAAATT---ATAAAAGGAACATTACATGTTCTTTTCTA  1090

seq1  CTATGGTAATGTGGTGTTTATCTTTTTTT  1129
      | |||| ||||||| |||   ||||||||
seq2  C-ATGG-AATGTGGGGTT--ACTTTTTTT  1115