BAC Information

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BAC

Clone NameB6Ng01-166L05
Chromosome16 (Build37)
Map Location 46,832,890 - 46,834,025
singlet/doubletsinglet
Overlap genenone
Upstream genePhldb2, EG667418, Plcxd2, 4930546O09Rik, Cd96, AL024110, Pvrl3
Downstream geneLOC628757, LOC628776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166L05.bB6Ng01-166L05.g
ACCDH958402DH958403
length1381,131
definitionDH958402|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L05, 5' end.DH958403|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttctccaccctgcccagccagacgccatcaactgtgaagagtcatatttc
agcatccctatcacattttttaggagttattttccatggctttctgtcta
gactgttcctctcttctcctctcctctcctctccactc
gaattcagcctctttcaacttctaggtaaaaaaaaatcaagtaaatcaat
gaagcaaataaatcctgtatttatttaaaggactttttccattaatgaat
agatttctttttaatttgacaagaaggtgaagctcagcctgaggaagcag
aaatgttcattgggctgactgcaagtgtcaaaaacaaggttaatagatcg
cacaatccacaatgggtggtaaattaaggagagccaaagctggataaata
tgagtgagttgcagagttggggaactgtttgtcaattcacccccagtgtt
tactcttataaagcagaagaaagctctctgtgcatgcctgtatctcctgc
agggcactgagggcacacagctagtactaagcactggctctacctttaca
aagacagtgaagaaggaaaacatatctttatcccgggtcagggagaatca
ccaaaggttctgtgaaaagccagggtaaagctaccaaattggattggaca
tttgctgtgcaccagacagtgggcaggtgctttgtgtatttcctctcatt
tgctgggctgactgtgagataaaaatcactgttttcttgtatggctgtgg
gtctcatcttcccagcgagcttacacacacccatccttaaagtcttcatg
cagccaaagtaactgagcagaataaataaaatctgggtaaaacagttcca
gacagatttttaatgtttaacatttaagaattgctttttcaatgctttaa
gattttattctttaatgatcctgttctataatttcatccagtgtctattt
aaaggccctagttcctccatttgtctattccaatctctaaatagtcatgc
actcatgtgcacttttcctggtagccctaacatgcatcactcctctaaca
gctgatatacatcattcaattttatccactttgaccccctctgtacagtt
tatacttataatttaaacaatcataagtgatgaaaatatgtaatggatag
ttcatgcttttcctattctacttaatagagtattaccttataaatcaatc
agccttttgggtataagaataatcctcatgcaagtcactttctctactag
cttgtatgtttggtctgctccatctctgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_46832890_46834025
seq2: B6Ng01-166L05.g_69_1199 (reverse)

seq1  AAGCAGAGATTGAGCAGAC--AACATACAGGCTAGTTAGGAAGAAAGTGA  48
      |||||||||| ||||||||  |||||||| ||||| |||  |||||||| 
seq2  AAGCAGAGATGGAGCAGACCAAACATACAAGCTAG-TAG--AGAAAGTG-  46

seq1  ACTTGGCATGAAGGATTATCTTAATACC--AAAAGCTGATTGATTTATTA  96
      |||| ||||| ||||||||  | |||||  ||| |||||||||||||| |
seq2  ACTT-GCATG-AGGATTATTCTTATACCCAAAAGGCTGATTGATTTATAA  94

seq1  GGTAATACTTCTAATATAGTAG-ATAGGAAAAAGCATGAACTATCCCATT  145
      |||||||| |||| || ||||| ||||| ||||||||||||||| |||||
seq2  GGTAATAC-TCTATTA-AGTAGAATAGG-AAAAGCATGAACTAT-CCATT  140

seq1  ACATATTTTCATCACTTATGATTGTTTAAATTATAAGTATAAACTGTACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTCATCACTTATGATTGTTTAAATTATAAGTATAAACTGTACA  190

seq1  GAGGGGGTCAAAGTGGATAAAATTGAATGATGTATATCAGCTGTTAGAGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTCAAAGTGGATAAAATTGAATGATGTATATCAGCTGTTAGAGG  240

seq1  AGTGATGCATGTTAGGGCTACCAGGAAAAGTGCACATGAGTGCATGACTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCATGTTAGGGCTACCAGGAAAAGTGCACATGAGTGCATGACTA  290

seq1  TTTAGAGATTGGAATAGACAAATGGAGGAACTAGGGCCTTTAAATAGACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGATTGGAATAGACAAATGGAGGAACTAGGGCCTTTAAATAGACA  340

seq1  CTGGATGAAATTATAGAACAGGATCATTAAAGAATAAAATCTTAAAGCAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAAATTATAGAACAGGATCATTAAAGAATAAAATCTTAAAGCAT  390

seq1  TGAAAAAGCAATTCTTAAATGTTAAACATTAAAAATCTGTCTGGAACTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGCAATTCTTAAATGTTAAACATTAAAAATCTGTCTGGAACTGT  440

seq1  TTTACCCAGATTTTATTTATTCTGCTCAGTTACTTTGGCTGCATGAAGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCAGATTTTATTTATTCTGCTCAGTTACTTTGGCTGCATGAAGAC  490

seq1  TTTAAGGATGGGTGTGTGTAAGCTCGCTGGGAAGATGAGACCCACAGCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGATGGGTGTGTGTAAGCTCGCTGGGAAGATGAGACCCACAGCCA  540

seq1  TACAAGAAAACAGTGATTTTTATCTCACAGTCAGCCCAGCAAATGAGAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAAACAGTGATTTTTATCTCACAGTCAGCCCAGCAAATGAGAGG  590

seq1  AAATACACAAAGCACCTGCCCACTGTCTGGTGCACAGCAAATGTCCAATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACAAAGCACCTGCCCACTGTCTGGTGCACAGCAAATGTCCAATC  640

seq1  CAATTTGGTAGCTTTACCCTGGCTTTTCACAGAACCTTTGGTGATTCTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGTAGCTTTACCCTGGCTTTTCACAGAACCTTTGGTGATTCTCC  690

seq1  CTGACCCGGGATAAAGATATGTTTTCCTTCTTCACTGTCTTTGTAAAGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCGGGATAAAGATATGTTTTCCTTCTTCACTGTCTTTGTAAAGGT  740

seq1  AGAGCCAGTGCTTAGTACTAGCTGTGTGCCCTCAGTGCCCTGCAGGAGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGTGCTTAGTACTAGCTGTGTGCCCTCAGTGCCCTGCAGGAGAT  790

seq1  ACAGGCATGCACAGAGAGCTTTCTTCTGCTTTATAAGAGTAAACACTGGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATGCACAGAGAGCTTTCTTCTGCTTTATAAGAGTAAACACTGGG  840

seq1  GGTGAATTGACAAACAGTTCCCCAACTCTGCAACTCACTCATATTTATCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTGACAAACAGTTCCCCAACTCTGCAACTCACTCATATTTATCC  890

seq1  AGCTTTGGCTCTCCTTAATTTACCACCCATTGTGGATTGTGCGATCTATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGCTCTCCTTAATTTACCACCCATTGTGGATTGTGCGATCTATT  940

seq1  AACCTTGTTTTTGACACTTGCAGTCAGCCCAATGAACATTTCTGCTTCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGTTTTTGACACTTGCAGTCAGCCCAATGAACATTTCTGCTTCCT  990

seq1  CAGGCTGAGCTTCACCTTCTTGTCAAATTAAAAAGAAATCTATTCATTAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGAGCTTCACCTTCTTGTCAAATTAAAAAGAAATCTATTCATTAA  1040

seq1  TGGAAAAAGTCCTTTAAATAAATACAGGATTTATTTGCTTCATTGATTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAGTCCTTTAAATAAATACAGGATTTATTTGCTTCATTGATTTA  1090

seq1  CTTGATTTTTTTTTACCTAGAAGTTGAAAGAGGCTGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTTTTTTTACCTAGAAGTTGAAAGAGGCTGAATTC  1131