BAC Information

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BAC

Clone NameB6Ng01-168C04
Chromosome16 (Build37)
Map Location 62,426,138 - 62,574,899
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1, Epha3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168C04.bB6Ng01-168C04.g
ACCDH959455DH959456
length9491,147
definitionDH959455|Mus musculus domesticus DNA, BAC clone: B6Ng01-168C04, 5' end.DH959456|Mus musculus domesticus DNA, BAC clone: B6Ng01-168C04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,574,141 - 62,574,899)(62,426,138 - 62,427,306)
sequence
gaattccattttgacctcttttaaaaagtagttcatatatttgtttattt
ttactctatgcacattggtgttttgccactatgtacgtctctctgagggt
gtcagatcttggagttacaggatagatgtgagctgttatgtaggtgcttg
gaatcaaacatgggtcctctggaagagcagcttaaccacggagcaatctc
ttcatccccttaacttttttttttttttgtaatttaatttttttcttttc
cccccaattgtcagtgctaacatgggatttgaaaggtgagagagaaggag
agcatcattattacatctcctgcgatgcttggcatagtggtcaaatgtgc
ggcctttacctgaagacagatttcacaaggcttcaaggcacagtcctgat
aataactaacctctgtgctccaggcagctctgattgccttcagcgttttc
tgtggtgactgcaaatttcagaatctcagagctagtagcaaaccctgagg
gccagaggctgtttctctgacctctattcctcaagcatgtcggacagtgt
gttaaacattgcaattcttgtattagtaatccctctgaaataccaaagag
agaaaattcaaatcttgggtatgtatccactgaatcaagagacaagctga
tccactactggggctttagagggcacatttgccaagttccaagcacagat
cttgttattcatttttgtcagggcttatgggcctggctgcctgtcctgac
agcatgagtttgaaatagaagcttgtcgctgtgagttgaagttaacgtct
actaacctaggtgtcctgcttcacacagaatgcagaaggaatccaacagc
caaatgtcaattgctgaggatgcttttattttccaaagcaatcaaggaat
atgattaaagtcaatttctggaagtaaatgaatagaagaaagcattttt
gaattctctatcctacagttctcctaaaaatatgtctgtttaacaattgc
ttgcaacaatttgcttcttttatcagagaatatacaaagcctctatggtt
agagttttgtgtgcgtgtgtgtgtttgtgtttcttaatttttgcttgact
ttagaaagaagaaaggaagagcatacaattgagtagggagggacatggag
aggatctggaagaaattgaggaaggggaaaatttggccagaatatattat
ataaaacatttttttcaacaaaaatgctaaaaaattaatgtaactgtttt
cctctctggccatatgctaacaagaattaaatcaccctaggcttttgtca
tgctgaccttgttcaaaaggttgtctatatacttcagtaatctctctaat
gcaagcttacctgttttcacaaggcactgtagtggtacagtactagcgtt
ttgcgagtccatggttaatctacagtagtgcaggtagtgtaaactcttaa
cactggggttcatctccaagactgtatactcaactataagaatgagcctt
tataaatatcccttgactacctatggagcacttgcagcctgaaaatttga
tggatttcataacatgttaaaatgttattccatgaaaaagcgatttttgc
cccctaagcctttggatttctaatatgccttatttttcaactttattatt
cacaatatttggttttcagtttcttaacatatcctgtggtaagacatggc
aggcatttttgtccttgagatgtgggtgcaagttactatattttccttct
tggccatctcatgagacaggcagtaaaatgccaagaataatgtaaactgt
acaggaaaataccatgacgtactacatctagaaatatctcagcttaatag
gtgttgtgccattaacggtgaattttatggaggtaaggaaatgtaatctg
tcatgtagacaagatttacaataatgccctcttcgtgcatgattcatcac
agttagatcgcaagcgacctagtgtttctgaagtctcttaagttatgaag
gcctcctcatattaatccaagttcttctttgacctcctggggtgatgcaa
agatgtaagatgccgtcttctctataatgctgaagtgaatcagtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62574141_62574899
seq2: B6Ng01-168C04.b_47_805 (reverse)

seq1  ACTCATGCTGTCAGGACAGGCAGCCAGGCCCATAAGCCCTGACAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGCTGTCAGGACAGGCAGCCAGGCCCATAAGCCCTGACAAAAATG  50

seq1  AATAACAAGATCTGTGCTTGGAACTTGGCAAATGTGCCCTCTAAAGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAGATCTGTGCTTGGAACTTGGCAAATGTGCCCTCTAAAGCCCC  100

seq1  AGTAGTGGATCAGCTTGTCTCTTGATTCAGTGGATACATACCCAAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGGATCAGCTTGTCTCTTGATTCAGTGGATACATACCCAAGATTT  150

seq1  GAATTTTCTCTCTTTGGTATTTCAGAGGGATTACTAATACAAGAATTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTCTCTTTGGTATTTCAGAGGGATTACTAATACAAGAATTGCA  200

seq1  ATGTTTAACACACTGTCCGACATGCTTGAGGAATAGAGGTCAGAGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAACACACTGTCCGACATGCTTGAGGAATAGAGGTCAGAGAAACA  250

seq1  GCCTCTGGCCCTCAGGGTTTGCTACTAGCTCTGAGATTCTGAAATTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGGCCCTCAGGGTTTGCTACTAGCTCTGAGATTCTGAAATTTGCA  300

seq1  GTCACCACAGAAAACGCTGAAGGCAATCAGAGCTGCCTGGAGCACAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACAGAAAACGCTGAAGGCAATCAGAGCTGCCTGGAGCACAGAGG  350

seq1  TTAGTTATTATCAGGACTGTGCCTTGAAGCCTTGTGAAATCTGTCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATTATCAGGACTGTGCCTTGAAGCCTTGTGAAATCTGTCTTCAG  400

seq1  GTAAAGGCCGCACATTTGACCACTATGCCAAGCATCGCAGGAGATGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGCCGCACATTTGACCACTATGCCAAGCATCGCAGGAGATGTAAT  450

seq1  AATGATGCTCTCCTTCTCTCTCACCTTTCAAATCCCATGTTAGCACTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCTCTCCTTCTCTCTCACCTTTCAAATCCCATGTTAGCACTGAC  500

seq1  AATTGGGGGGAAAAGAAAAAAATTAAATTACAAAAAAAAAAAAAAGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGGGGAAAAGAAAAAAATTAAATTACAAAAAAAAAAAAAAGTTAA  550

seq1  GGGGATGAAGAGATTGCTCCGTGGTTAAGCTGCTCTTCCAGAGGACCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAAGAGATTGCTCCGTGGTTAAGCTGCTCTTCCAGAGGACCCAT  600

seq1  GTTTGATTCCAAGCACCTACATAACAGCTCACATCTATCCTGTAACTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCCAAGCACCTACATAACAGCTCACATCTATCCTGTAACTCCA  650

seq1  AGATCTGACACCCTCAGAGAGACGTACATAGTGGCAAAACACCAATGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGACACCCTCAGAGAGACGTACATAGTGGCAAAACACCAATGTGC  700

seq1  ATAGAGTAAAAATAAACAAATATATGAACTACTTTTTAAAAGAGGTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTAAAAATAAACAAATATATGAACTACTTTTTAAAAGAGGTCAAA  750

seq1  ATGGAATTC  759
      |||||||||
seq2  ATGGAATTC  759

seq1: chr16_62426138_62427306
seq2: B6Ng01-168C04.g_66_1212

seq1  GAATTCTCTATCCTACAGTTCTCCTAAAAATATGTCTGTTTAACAATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATCCTACAGTTCTCCTAAAAATATGTCTGTTTAACAATTGC  50

seq1  TTGCAACAATTTGCTTCTTTTATCAGAGAATATACAAAGCCTCTATGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACAATTTGCTTCTTTTATCAGAGAATATACAAAGCCTCTATGGTT  100

seq1  AGAGTTTTGTGTGCGTGTGTGTGTTTGTGTTTCTTAATTTTTGCTTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTGTGTGCGTGTGTGTGTTTGTGTTTCTTAATTTTTGCTTGACT  150

seq1  TTAGAAAGAAGAAAGGAAGAGCATACAATTGAGTAGGGAGGGACATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGAAGAAAGGAAGAGCATACAATTGAGTAGGGAGGGACATGGAG  200

seq1  AGGATCTGGAAGAAATTGAGGAAGGGGAAAATTTGGCCAGAATATATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTGGAAGAAATTGAGGAAGGGGAAAATTTGGCCAGAATATATTAT  250

seq1  ATAAAACATTTTTTTCAACAAAAATGCTAAAAAATTAATGTAACTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATTTTTTTCAACAAAAATGCTAAAAAATTAATGTAACTGTTTT  300

seq1  CCTCTCTGGCCATATGCTAACAAGAATTAAATCACCCTAGGCTTTTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGGCCATATGCTAACAAGAATTAAATCACCCTAGGCTTTTGTCA  350

seq1  TGCTGACCTTGTTCAAAAGGTTGTCTATATACTTCAGTAATCTCTCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCTTGTTCAAAAGGTTGTCTATATACTTCAGTAATCTCTCTAAT  400

seq1  GCAAGCTTACCTGTTTTCACAAGGCACTGTAGTGGTACAGTACTAGCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTACCTGTTTTCACAAGGCACTGTAGTGGTACAGTACTAGCGTT  450

seq1  TTGCGAGTCCATGGTTAATCTACAGTAGTGCAGGTAGTGTAAACTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGAGTCCATGGTTAATCTACAGTAGTGCAGGTAGTGTAAACTCTTAA  500

seq1  CACTGGGGTTCATCTCCAAGACTGTATACTCAACTATAAGAATGAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGTTCATCTCCAAGACTGTATACTCAACTATAAGAATGAGCCTT  550

seq1  TATAAATATCCCTTGACTACCTATGGAGCACTTGCAGCCTGAAAATTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATCCCTTGACTACCTATGGAGCACTTGCAGCCTGAAAATTTGA  600

seq1  TGGATTTCATAACATGTTAAAATGTTATTCCATGAAAAAGCGATTTTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCATAACATGTTAAAATGTTATTCCATGAAAAAGCGATTTTTGC  650

seq1  CCCCTAAGCCTTTGGATTTCTAATATGCCTTATTTTTCAACTTTATTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAGCCTTTGGATTTCTAATATGCCTTATTTTTCAACTTTATTATT  700

seq1  CACAATATTTGGTTTTCAGTTTCTTAACATATCCTGTGGTAAGACATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATTTGGTTTTCAGTTTCTTAACATATCCTGTGGTAAGACATGGC  750

seq1  AGGCATTTTTGTCCTTGAGATGTGGGTGCAAGTTACTATATTTTCCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTTTGTCCTTGAGATGTGGGTGCAAGTTACTATATTTTCCTTCT  800

seq1  TGGCCATCTCATGAGACAGGCAGTAAAATGCCAAGAATAATGTAAACTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATCTCATGAGACAGGCAGTAAAATGCCAAGAATAATGTAAACTGT  850

seq1  ACAGGAAAATACCATGACGTACTACATCTAGAAATATCTCAGCTTAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAATACCATGACGTACTACATCTAGAAATATCTCAGCTTAATAG  900

seq1  GTGTTGTGCCATTAACGGTGAATTTTATGGAGGTAAGGAAATGTAAATCT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGTTGTGCCATTAACGGTGAATTTTATGGAGGTAAGGAAATGT-AATCT  949

seq1  GTCATGTAGACAAAGATTTACAATAATGCCCCCTTCCGTGCATGATTTCC  1000
      ||||||||||| ||||||||||||||||||| ||| |||||||||||  |
seq2  GTCATGTAGAC-AAGATTTACAATAATGCCCTCTT-CGTGCATGATT--C  995

seq1  ATCACAGTTAGGATCGCCAGGCGACCTAGGTGTTTTCTGGAGTCTCTTAA  1050
      |||||||||| ||||| || |||||||| ||| |||||| ||||||||||
seq2  ATCACAGTTA-GATCG-CAAGCGACCTA-GTG-TTTCTGAAGTCTCTTAA  1041

seq1  GTTATGAAGGCCTCCTCATATTAATCCAAGGTTCTTCTCTTGACCTTCCT  1100
      ||||||||||||||||||||||||||||| |||||||| |||||| ||||
seq2  GTTATGAAGGCCTCCTCATATTAATCCAA-GTTCTTCT-TTGACC-TCCT  1088

seq1  GGAGTTGATGCAGATGATGTAGAAGATGCCGTTCTTCCCTTCTATTATTG  1150
      || | ||||||| | |||||  ||||||||| |||||   |||| || ||
seq2  GG-GGTGATGCA-AAGATGT--AAGATGCCG-TCTTC---TCTA-TAATG  1129

seq1  CTGATGTGATTTCAGTCAG  1169
      |||| ||||  ||||||||
seq2  CTGAAGTGA-ATCAGTCAG  1147