BAC Information

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BAC

Clone NameB6Ng01-170L15
Chromosome16 (Build37)
Map Location 67,451,375 - 67,595,702
singlet/doubletdoublet
Overlap geneCadm2
Upstream gene9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170L15.bB6Ng01-170L15.g
ACCDH961365DH961366
length1,106949
definitionDH961365|Mus musculus domesticus DNA, BAC clone: B6Ng01-170L15, 5' end.DH961366|Mus musculus domesticus DNA, BAC clone: B6Ng01-170L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,594,588 - 67,595,702)(67,451,375 - 67,452,323)
sequence
gaattcattgtaattatctgaaaattgtggattcagaaccgttagttgat
aggtaaaatacctaatattttaaataatttttgacaattttcttaaaatt
ttcccattgtggcttaaccacacctgctataaatgcaacactatttggta
tgtgtgtattcatttttgaagaatatttaaagggaactaaaatacagagt
tttcaccaaaaggactatctatatccatagtttccacagcaggaagcagt
gaattcacctactaagaaaaaagagaagcctcctctgcctatgtcccact
gtctttcctataagccaccagtgtttaaactaggaagccagtcatctcag
acatgttgaaccaacatatgccggtgggtcgggtatggtggtgcatgcct
ttaatcccagcactccggaggcagaagcaggcgaatttctgagttttcgg
ccagcctggtctacaaagtgagttccaggagagccagggctacacagaga
aaccctgtctcaaaaaacaaacagcaacaacaacaacaactacaacaaca
acaaaaacatatgcctggtgggttttggcaaacacctttaatccttgcac
tcaggtgacagaggcaggcagatctttgtaagttaaaggctagcctggtc
tacagacataattccaggagaggcaaaactacactaacaaaccctgtctt
agaaaaaaaaaaaaaataacccaaacccaaacaaacaaaaaacaaaagaa
aaactataaaacagtgaaacaagcaaacaaccacaaagcctcccacatgt
ttatctgtagtttgcccttctatgctagaagtataaacactgaatgactc
agcttttgaaatgataaccttataccctgtatattaagaagatgtttttg
acatgtataagaagctctatatgtacctagagactctcaaaatgttctta
aaatttttctataaacttttattctttatttcatgagtatgggactagga
tatttttctcatatttcaccatacagtatctggacatgttataccctaca
catgtctgcaagatttcagagcttctctgttcctccctagctttaatgaa
tcagca
gaattctttcttctaactggaggctctggcctcttttcttagattttttt
ttttaaagaaaacattaagttgaaactttattaccattctttgagattta
ttcaagctttctttaaaaatcatcacaatatagaagtacaatgtcttcct
caaagacctaggatcctcactctgaaattagtcagcaaggaagatagtct
tctcttcctggatataggaaggtgggatgctaaaatcacatgaactttgg
ttaacaaacaatgatggcttgataacaaaggaaaaatctttgaaagggta
tagaacaaaataatgtacctaaaatatcccatttatgaactcttgtaata
ttgtctgatcctttcttaaatctcatctaagacactttaaaaatactctg
cctcctccttttgtttcagtaagatgaatacaatgtgaagtatatcttcc
cttttctgtggctattgtctttagtagtcttctttacttattcaactttg
gtatatatcactttatatatatatacatatatatacatatatatatatat
atatatatatatatatatatatgtatatttgacttctagtaatattgtgg
aacaataaataactagagaaagaagataaaaagagtatataagtgtttgt
tttgtggtatatgttaatatacgtatatacatacatatatatatatatat
gccctatgattatatatatatatattatattatatatatatatatatata
tatgatattttacaagacattttttctcttgatttaggtaaaaatcttcc
taccaattaaggatacatgtatgctattatttaagtactaaaaattcttg
gtcaattttgacttacaacacatatctatttcacacaaactctcttcatg
tttgggtcagatcctttaaatagaatgaattttatcttccaaagagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67594588_67595702
seq2: B6Ng01-170L15.b_47_1152 (reverse)

seq1  TGCTGATTCAATAAAAGCTATGTGAGAGACAGAGAAGCTCTGAAATCTTT  50
      ||||||||| || ||||||| | |||  ||||||||||||||||||| ||
seq2  TGCTGATTC-ATTAAAGCTA-GGGAGGAACAGAGAAGCTCTGAAATC-TT  47

seq1  GCAGACATGTATGTAGGGTATAACATGTTCCAGATACTGTATTGGTGAAA  100
      |||||||||  |||||||||||||||| ||||||||||||| ||||||||
seq2  GCAGACATG--TGTAGGGTATAACATG-TCCAGATACTGTA-TGGTGAAA  93

seq1  TATTGAGAAAATATTCTTAGTTCCATACTCATGAAATAAAGAATAAAAGT  150
      || ||||||||   || |||| ||||||||||||||||||||||||||||
seq2  TA-TGAGAAAAATATCCTAGTCCCATACTCATGAAATAAAGAATAAAAGT  142

seq1  TTATAGAAAAATTTTAAGAACATTTTGAGAGTTCTCTAGGTACATATAGA  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTATAGAAAAATTTTAAGAACATTTTGAGAG-TCTCTAGGTACATATAGA  191

seq1  GCTTCTTATACATGTCAAAAACATCTTCTTAATATACAGGGTATAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTATACATGTCAAAAACATCTTCTTAATATACAGGGTATAAGGTT  241

seq1  ATCATTTCAAAAGCTGAGTCATTCAGTGTTTATACTTCTAGCATAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCAAAAGCTGAGTCATTCAGTGTTTATACTTCTAGCATAGAAGG  291

seq1  GCAAACTACAGATAAACATGTGGGAGGCTTTGTGGTTGTTTGCTTGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTACAGATAAACATGTGGGAGGCTTTGTGGTTGTTTGCTTGTTTC  341

seq1  ACTGTTTTATAGTTTTTCTTTTGTTTTTTGTTTGTTTGGGTTTGGGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTATAGTTTTTCTTTTGTTTTTTGTTTGTTTGGGTTTGGGTTAT  391

seq1  TTTTTTTTTTTTTCTAAGACAGGGTTTGTTAGTGTAGTTTTGCCTCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCTAAGACAGGGTTTGTTAGTGTAGTTTTGCCTCTCCT  441

seq1  GGAATTATGTCTGTAGACCAGGCTAGCCTTTAACTTACAAAGATCTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATGTCTGTAGACCAGGCTAGCCTTTAACTTACAAAGATCTGCCT  491

seq1  GCCTCTGTCACCTGAGTGCAAGGATTAAAGGTGTTTGCCAAAACCCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTCACCTGAGTGCAAGGATTAAAGGTGTTTGCCAAAACCCACCA  541

seq1  GGCATATGTTTTTGTTGTTGTTGTAGTTGTTGTTGTTGTTGCTGTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGTTTTTGTTGTTGTTGTAGTTGTTGTTGTTGTTGCTGTTTGTT  591

seq1  TTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTCTCCTGGAACTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTCTCCTGGAACTCACTT  641

seq1  TGTAGACCAGGCTGGCCGAAAACTCAGAAATTCGCCTGCTTCTGCCTCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCGAAAACTCAGAAATTCGCCTGCTTCTGCCTCCG  691

seq1  GAGTGCTGGGATTAAAGGCATGCACCACCATACCCGACCCACCGGCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGATTAAAGGCATGCACCACCATACCCGACCCACCGGCATAT  741

seq1  GTTGGTTCAACATGTCTGAGATGACTGGCTTCCTAGTTTAAACACTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTCAACATGTCTGAGATGACTGGCTTCCTAGTTTAAACACTGGTG  791

seq1  GCTTATAGGAAAGACAGTGGGACATAGGCAGAGGAGGCTTCTCTTTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGGAAAGACAGTGGGACATAGGCAGAGGAGGCTTCTCTTTTTTC  841

seq1  TTAGTAGGTGAATTCACTGCTTCCTGCTGTGGAAACTATGGATATAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGGTGAATTCACTGCTTCCTGCTGTGGAAACTATGGATATAGATA  891

seq1  GTCCTTTTGGTGAAAACTCTGTATTTTAGTTCCCTTTAAATATTCTTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTTGGTGAAAACTCTGTATTTTAGTTCCCTTTAAATATTCTTCAA  941

seq1  AAATGAATACACACATACCAAATAGTGTTGCATTTATAGCAGGTGTGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATACACACATACCAAATAGTGTTGCATTTATAGCAGGTGTGGTT  991

seq1  AAGCCACAATGGGAAAATTTTAAGAAAATTGTCAAAAATTATTTAAAATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAATGGGAAAATTTTAAGAAAATTGTCAAAAATTATTTAAAATA  1041

seq1  TTAGGTATTTTACCTATCAACTAACGGTTCTGAATCCACAATTTTCAGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATTTTACCTATCAACTAACGGTTCTGAATCCACAATTTTCAGAT  1091

seq1  AATTACAATGAATTC  1115
      |||||||||||||||
seq2  AATTACAATGAATTC  1106

seq1: chr16_67451375_67452323
seq2: B6Ng01-170L15.g_69_1017

seq1  GAATTCTTTCTTCTAACTGGAGGCTCTGGCCTCTTTTCTTAGATTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCTAACTGGAGGCTCTGGCCTCTTTTCTTAGATTTTTTT  50

seq1  TTTTAAAGAAAACATTAAGTTGAAACTTTATTACCATTCTTTGAGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAAAACATTAAGTTGAAACTTTATTACCATTCTTTGAGATTTA  100

seq1  TTCAAGCTTTCTTTAAAAATCATCACAATATAGAAGTACAATGTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTTTCTTTAAAAATCATCACAATATAGAAGTACAATGTCTTCCT  150

seq1  CAAAGACCTAGGATCCTCACTCTGAAATTAGTCAGCAAGGAAGATAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTAGGATCCTCACTCTGAAATTAGTCAGCAAGGAAGATAGTCT  200

seq1  TCTCTTCCTGGATATAGGAAGGTGGGATGCTAAAATCACATGAACTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTGGATATAGGAAGGTGGGATGCTAAAATCACATGAACTTTGG  250

seq1  TTAACAAACAATGATGGCTTGATAACAAAGGAAAAATCTTTGAAAGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAACAATGATGGCTTGATAACAAAGGAAAAATCTTTGAAAGGGTA  300

seq1  TAGAACAAAATAATGTACCTAAAATATCCCATTTATGAACTCTTGTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAAAATAATGTACCTAAAATATCCCATTTATGAACTCTTGTAATA  350

seq1  TTGTCTGATCCTTTCTTAAATCTCATCTAAGACACTTTAAAAATACTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGATCCTTTCTTAAATCTCATCTAAGACACTTTAAAAATACTCTG  400

seq1  CCTCCTCCTTTTGTTTCAGTAAGATGAATACAATGTGAAGTATATCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTTTTGTTTCAGTAAGATGAATACAATGTGAAGTATATCTTCC  450

seq1  CTTTTCTGTGGCTATTGTCTTTAGTAGTCTTCTTTACTTATTCAACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTGGCTATTGTCTTTAGTAGTCTTCTTTACTTATTCAACTTTG  500

seq1  GTATATATCACTTTATATATATATACATATATATACATATATATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATCACTTTATATATATATACATATATATACATATATATATATAT  550

seq1  ATATATATATATATATATATATGTATATTTGACTTCTAGTAATATTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATGTATATTTGACTTCTAGTAATATTGTGG  600

seq1  AACAATAAATAACTAGAGAAAGAAGATAAAAAGAGTATATAAGTGTTTG-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACAATAAATAACTAGAGAAAGAAGATAAAAAGAGTATATAAGTGTTTGT  650

seq1  TTTGTGGTATATGTTAATATACGTATATACATACATATATATATATATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTATATGTTAATATACGTATATACATACATATATATATATATAT  700

seq1  GCCCTATGATTATATATATATATATTATATTATATATATATATATATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATGATTATATATATATATATTATATTATATATATATATATATATA  750

seq1  TATGATATTTTACAAGACA-TTTTTCTCTTGATTTAGGTAAAAATCTTCC  798
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATGATATTTTACAAGACATTTTTTCTCTTGATTTAGGTAAAAATCTTCC  800

seq1  TACCAAATTAATGATACATGTATGCTATTATTTAAGTACT-AAAATTCTT  847
      |||| |||||| |||||||||||||||||||||||||||| |||||||||
seq2  TACC-AATTAAGGATACATGTATGCTATTATTTAAGTACTAAAAATTCTT  849

seq1  GGTCAA-TTTGACTTACAACACATATCTATTTCTTCAAAAACTCACATCA  896
      |||||| ||||||||||||||||||||||||||  || |||||| | |||
seq2  GGTCAATTTTGACTTACAACACATATCTATTTC-ACACAAACTCTCTTCA  898

seq1  TTTTTGGTTCTATTCCTTTAAATAAAAAGGAATTTTATCTTCATAAAGAG  946
      | ||||| ||   |||||||||| | || |||||||||||||  ||||||
seq2  TGTTTGGGTCAGATCCTTTAAAT-AGAATGAATTTTATCTTC-CAAAGAG  946

seq1  TGT  949
      |||
seq2  TGT  949