BAC Information

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BAC

Clone NameB6Ng01-170P10
Chromosome16 (Build37)
Map Location 64,112,676 - 64,243,556
singlet/doubletdoublet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170P10.bB6Ng01-170P10.g
ACCDH961547DH961548
length1,1211,140
definitionDH961547|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P10, 5' end.DH961548|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,112,676 - 64,113,608)(64,242,394 - 64,243,556)
sequence
gaattcctgatatctccaagacttttaacgtgaagggctgtcacattttt
caaagtctttttcaccatctaatgtgaaaacctaatcatgtggctttttt
ccttgagtttgtttatatagtgtactgcgttgatgaattttcatatattg
aatcatccctgcattcctgggatgaagcctacttgactgtggtgaatgag
gttttgatgtgttcttggatttggtttgagagaattttattgagtacttt
tggattgatattgacaagcgagattgatctgaagttctcatcctttgtta
ggtctcttaaacttgtctctgtaaaactcatctagggaaaaaaaaacaag
cctgcttcttccttctctctctgagcctctcccttaagctgcttctcttt
cctctcttttcctgtaaaagttgggcatattctattgagtcaaatcttcc
tctggtttttaactttgtctgcccctcaattagacattactttcaaacat
ttcaaactactaaatttaccttcactgtttgggattaaaggtgtgtacta
ggggcctgtctgtactccagccagaggaattaaaatgtatgctaaggctg
agccacaccccaactaaaaccaggttttccagtaaactacaagaccttag
ggttctctgtgtagtaaaatatcctgcaacaccaaggtgggttatatttt
gtttttgttttaggtattttcagtgctttccttcattcctattacagata
atttctcataaagttacactattgacatttacttcgtgactttgtcatga
ctcttcttgcttctatgaccaaacacccaacaaaaagcagcttaaaggag
gaaggctttctattggctcatgatgtgaagcgtttggtcatgttgtgggc
atagtcaggaatctaagaaaagaatggttgtgctcagcacactgttttca
caagttcaacgacctagtccatgaactggcaccacccatgaccaagatgt
atctcctctgctcagttaaatatttcctgaacccacctaaccaccatatc
cagagctgtctctctgaagtatatcttaatgtcgacaacttgacaatgag
attaagagccatgggggattt
gaattcatccattcaggattttataaactgaattgttaatgataattgtg
tatatatatatatatatatatatatatatatatcacttaaagaaatttat
tttctaattttatgccataaattttattttcaaaaatatttagccactca
ctgtaagaatttaaaatattttgtattagaataacttatagtatttaatg
ttatctttgcaataaaagtcagtagtaagatcagataagattaattttct
atgtaaggaaagaacattttaccttgccgttacacattagaaaggaaaat
atacatacacacacctatttagtttctgtttctttttattgatatgaact
tattttatccatgtaaacatgatctattgatgcttgtcagctaactgaag
atctcacttgaaaatgagacaaccttcgatcccacactcagctgtcactc
aggtggtcttgtacttgtgaagccatgctgataccaatgatagactttga
ggaatacacttgggggtgcatacttctcatccagcagaacatggtgaatg
taggagacttgcttgcatcaagtcttctggggaagtctacctaacagggt
atctagcccgcacattcaaatgtaccctgtccctcgcccaccttctttct
gctctccctcaccttccttattcctttcttcctttttattttgcattttg
ttatagaatctcatagtgtactatacaccagcctctgaatttaagatgtc
actgcctcaacttttccagtacagacaacacaggtaggcagtaccatact
cacctttttatttttcttagttaaggtttggattatctacaaagtaatcc
actttgtctttgaatactttgtattttgtcttggatgattattttcttta
tgaaagcaaatatttctttgcctgtatttaagtgctgcatcatgacactc
tcttcatccttaagcaaggacaaattttgctctcatcgatttgtgactta
atggtgtcagaaagttgcgtgtatgtggcctttgtcatttgttgcagagt
ttttcacacaacgtgcatagtgattcgtttgacaaagacctacactgaag
cagcttgagccttgacatgagactccccttgctctccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64112676_64113608
seq2: B6Ng01-170P10.b_229_1165

seq1  GACTGTGGTGAATGAGGTTTTGATGTGTTCTTGGATTTGGTTTGAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGTGAATGAGGTTTTGATGTGTTCTTGGATTTGGTTTGAGAGAA  50

seq1  TTTTATTGAGTACTTTTGGATTGATATTGACAAGCGAGATTGATCTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAGTACTTTTGGATTGATATTGACAAGCGAGATTGATCTGAAG  100

seq1  TTCTCATCCTTTGTTAGGTCTCTTAAACTTGTCTCTGTAAAACTCATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCCTTTGTTAGGTCTCTTAAACTTGTCTCTGTAAAACTCATCTA  150

seq1  GGGAAAAAAAAACAAGCCTGCTTCTTCCTTCTCTCTCTGAGCCTCTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAAAAACAAGCCTGCTTCTTCCTTCTCTCTCTGAGCCTCTCCCT  200

seq1  TAAGCTGCTTCTCTTTCCTCTCTTTTCCTGTAAAAGTTGGGCATATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCTTCTCTTTCCTCTCTTTTCCTGTAAAAGTTGGGCATATTCTA  250

seq1  TTGAGTCAAATCTTCCTCTGGTTTTTAACTTTGTCTGCCCCTCAATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCAAATCTTCCTCTGGTTTTTAACTTTGTCTGCCCCTCAATTAGA  300

seq1  CATTACTTTCAAACATTTCAAACTACTAAATTTACCTTCACTGTTTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTTCAAACATTTCAAACTACTAAATTTACCTTCACTGTTTGGGA  350

seq1  TTAAAGGTGTGTACTAGGGGCCTGTCTGTACTCCAGCCAGAGGAATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTGTGTACTAGGGGCCTGTCTGTACTCCAGCCAGAGGAATTAAA  400

seq1  ATGTATGCTAAGGCTGAGCCACACCCCAACTAAAACCAGGTTTTCCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCTAAGGCTGAGCCACACCCCAACTAAAACCAGGTTTTCCAGTA  450

seq1  AACTACAAGACCTTAGGGTTCTCTGTGTAGTAAAATATCCTGCAACACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAAGACCTTAGGGTTCTCTGTGTAGTAAAATATCCTGCAACACCA  500

seq1  AGGTGGGTTATATTTTG-TTTTGTTTTAGGTATTTTCAGTGCTTTCCTTC  549
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGTGGGTTATATTTTGTTTTTGTTTTAGGTATTTTCAGTGCTTTCCTTC  550

seq1  ATTCCTATTACAGATAA-TTCTCATAAAGTTACACTATTGACATTTACTT  598
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCCTATTACAGATAATTTCTCATAAAGTTACACTATTGACATTTACTT  600

seq1  CGTGACTTTGTCATGACTCTTCTTGCTTCTATGACCAAACACCCAACAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACTTTGTCATGACTCTTCTTGCTTCTATGACCAAACACCCAACAAA  650

seq1  AAGCAGCTTAAAGGAGGAAGGCTTTCTATTGGCTCATGATGTGAAGCGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTTAAAGGAGGAAGGCTTTCTATTGGCTCATGATGTGAAGCGTT  700

seq1  TGGTCATGTTGTGGCCATAGTCAGGAATCTAAGAAAAGAATGGTTGTGCT  748
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGTCATGTTGTGGGCATAGTCAGGAATCTAAGAAAAGAATGGTTGTGCT  750

seq1  CAGCACACTGTTTTCACAAGTCCAACGACCTAGTCCATGAACTGGCACCA  798
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGCACACTGTTTTCACAAGTTCAACGACCTAGTCCATGAACTGGCACCA  800

seq1  CCCATGACCAAGATGTATCTTCTCTGCTCAGTTAAATATTT-CTGAACAC  847
      |||||||||||||||||||| |||||||||||||||||||| |||||| |
seq2  CCCATGACCAAGATGTATCTCCTCTGCTCAGTTAAATATTTCCTGAACCC  850

seq1  ACCTTACCCACATACCCAGAGCTGTCCTTCTGGAGTATATC-TAATGTCG  896
      |||| |||  |||| |||||||||||  |||| |||||||| ||||||||
seq2  ACCTAACCACCATATCCAGAGCTGTCTCTCTGAAGTATATCTTAATGTCG  900

seq1  TCAACTTGACAATGAAGATTAAGAGTCAT-GGTGATTT  933
       ||||||||||||| |||||||||| ||| || |||||
seq2  ACAACTTGACAATG-AGATTAAGAGCCATGGGGGATTT  937

seq1: chr16_64242394_64243556
seq2: B6Ng01-170P10.g_68_1207 (reverse)

seq1  AAAGGAGAAGCTAATGTGGGAGTCTCAATGTCAGAGGCCTTCAAGCTTTG  50
      ||||||| ||| |    ||||||||| |||||| ||||  ||||||  ||
seq2  AAAGGAG-AGCAA---GGGGAGTCTC-ATGTCA-AGGC--TCAAGC--TG  40

seq1  C-TCAGTGTAGTGTCTTTGTCAAAACGAATCACTACTGCCACTGTTGTGT  99
      | ||||||||| ||||||||| ||||||||||||| || ||| |||||||
seq2  CTTCAGTGTAG-GTCTTTGTC-AAACGAATCACTA-TG-CAC-GTTGTGT  85

seq1  GAAAAACATCTGCAAACAAATGACAAAGGCCACACTACCACGCAGCTTTC  149
      ||||||| ||||| |||||||||||||||||||| || |||||| |||| 
seq2  GAAAAAC-TCTGC-AACAAATGACAAAGGCCACA-TA-CACGCAACTTT-  130

seq1  CTGACA-CATTAAGTCAACAAATCGATG-GGGCAAAATTTTGTCCTTTGC  197
      |||||| ||||||||| ||||||||||| | |||||| ||||||| ||||
seq2  CTGACACCATTAAGTC-ACAAATCGATGAGAGCAAAA-TTTGTCC-TTGC  177

seq1  TTTAAGGATGAAGAGAGTGTCATGATGCAGCACTTAAATACAGGCAAAGA  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTAAGGATGAAGAGAGTGTCATGATGCAGCACTTAAATACAGGCAAAGA  226

seq1  AATATTTGCTTTCATAAAGAAAATAATTCATCCAAAGACAAAATACAAAG  297
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  AATATTTGCTTTCATAAAGAAAATAA-TCATCC-AAGACAAAATACAAAG  274

seq1  TATTCAAAGACAAAGTGGATTACTTTGTAGATAATCCAAACCTTAACTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAGACAAAGTGGATTACTTTGTAGATAATCCAAACCTTAACTAA  324

seq1  GAAAAATAAAAAGGTGAGTATGGTACTGCCTACCTGTGTTGTCTGTACTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAAAAGGTGAGTATGGTACTGCCTACCTGTGTTGTCTGTACTG  374

seq1  GAAAAGTTGAGGCAGTGACATCTTAAATTCAGAGGCTGGTGTATAGTACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTGAGGCAGTGACATCTTAAATTCAGAGGCTGGTGTATAGTACA  424

seq1  CTATGAGATTCTATAACAAAATGCAAAATAAAAAGGAAGAAAGGAATAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGATTCTATAACAAAATGCAAAATAAAAAGGAAGAAAGGAATAAG  474

seq1  GAAGGTGAGGGAGAGCAGAAAGAAGGTGGGCGAGGGACAGGGTACATTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGAGGGAGAGCAGAAAGAAGGTGGGCGAGGGACAGGGTACATTTG  524

seq1  AATGTGCGGGCTAGATACCCTGTTAGGTAGACTTCCCCAGAAGACTTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCGGGCTAGATACCCTGTTAGGTAGACTTCCCCAGAAGACTTGAT  574

seq1  GCAAGCAAGTCTCCTACATTCACCATGTTCTGCTGGATGAGAAGTATGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAGTCTCCTACATTCACCATGTTCTGCTGGATGAGAAGTATGCA  624

seq1  CCCCCAAGTGTATTCCTCAAAGTCTATCATTGGTATCAGCATGGCTTCAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGTGTATTCCTCAAAGTCTATCATTGGTATCAGCATGGCTTCAC  674

seq1  AAGTACAAGACCACCTGAGTGACAGCTGAGTGTGGGATCGAAGGTTGTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAGACCACCTGAGTGACAGCTGAGTGTGGGATCGAAGGTTGTCT  724

seq1  CATTTTCAAGTGAGATCTTCAGTTAGCTGACAAGCATCAATAGATCATGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAAGTGAGATCTTCAGTTAGCTGACAAGCATCAATAGATCATGT  774

seq1  TTACATGGATAAAATAAGTTCATATCAATAAAAAGAAACAGAAACTAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGATAAAATAAGTTCATATCAATAAAAAGAAACAGAAACTAAAT  824

seq1  AGGTGTGTGTATGTATATTTTCCTTTCTAATGTGTAACGGCAAGGTAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGTATGTATATTTTCCTTTCTAATGTGTAACGGCAAGGTAAAA  874

seq1  TGTTCTTTCCTTACATAGAAAATTAATCTTATCTGATCTTACTACTGACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTCCTTACATAGAAAATTAATCTTATCTGATCTTACTACTGACT  924

seq1  TTTATTGCAAAGATAACATTAAATACTATAAGTTATTCTAATACAAAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCAAAGATAACATTAAATACTATAAGTTATTCTAATACAAAATA  974

seq1  TTTTAAATTCTTACAGTGAGTGGCTAAATATTTTTGAAAATAAAATTTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTCTTACAGTGAGTGGCTAAATATTTTTGAAAATAAAATTTAT  1024

seq1  GGCATAAAATTAGAAAATAAATTTCTTTAAGTGATATATATATATATATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAAATTAGAAAATAAATTTCTTTAAGTGATATATATATATATATA  1074

seq1  TATATATATATATATACACAATTATCATTAACAATTCAGTTTATAAAATC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATACACAATTATCATTAACAATTCAGTTTATAAAATC  1124

seq1  CTGAATGGATGAATTC  1163
      ||||||||||||||||
seq2  CTGAATGGATGAATTC  1140