BAC Information

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BAC

Clone NameB6Ng01-172D17
Chromosome16 (Build37)
Map Location 71,454,384 - 71,598,141
singlet/doubletdoublet
Overlap genenone
Upstream geneGbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172D17.bB6Ng01-172D17.g
ACCGA000904GA000905
length1,128836
definitionB6Ng01-172D17.b B6Ng01-172D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,454,384 - 71,455,502)(71,597,312 - 71,598,141)
sequence
gaattcttaaacagatgttttagacagattttctccactttctgtttcca
tggggttgtctctcacctgcataattactgctttacccaataatgaaaaa
caaaaagtatgagaaaaacacatcctagagtcccccgtgagaagaaaatt
gtttctttggttcccatacttttatttatagttccttgaatattggatac
agtaatggaggggaaattaacttccttagcagattttaacacccctgaac
aatgaatgtcattcctcttgccaattagtcatttgatacatggtgatgat
ctctacagtatcacagctcttcctccaaatactttttgtttactgtacag
ccttatgataaagtctcagagaacaaaatggggtatagagatggttcagc
agttacgtgcatttgatacttgagaataagaccagaattgtcaggtcatc
gactccagttccacagagatctgacatctcaggcgactgtagccttctgc
actcacaggtacacacatgcacatgcatgcacagacacatgaatgcacac
acaagtacacatacacaaacatacacacaaacacacacacatgcacacac
aaaaatacacaaatacatacacacatactgataagtatgtaacaaaaaca
acatagggaagactatcaacctgaatgcaagttgaaaggcatggaggatg
tttaagagatggtaactaggtggtgggactggggcaaactagaaaaagag
gggcaatggtgtaattctatctcagttaaaataacaaaataaatatttta
aaatacactgaatataagaaacagtagatagatagatagatagatagata
gatagatagatagatagatagatagatgttgaaattaagtttaatttgag
taaaaacctcattttggtggttgagaggtataagcccacctgggagagag
taagacaaaagagatcagaagttcaaagcttaacctggtgtcaccagttt
atacttaatttagagataaagagagatgaactggagatggtggtaagaaa
gagagttttagaataaattataggaacaatatgcttaaatgtaccaaatt
gaatggcaaaattggggggaatgtattt

gaattctacattgcaaaattctcaggaaaatgtatagaaccaggaaatat
cattctgagtgaggaaacccagacccagaaaagcactcatggtatgtatt
cacttaaaggtggttaatagctatgaagtacaggataaccatgctgcaag
caacaaacatataaaagctaaggaacaaggacggtccaagggaagatact
tgaatctcactcagaagaggaaataaaatagacattggaggtagatgaag
ggagggacatggatgagagataaagtttataaactattttagacacgtct
ctaatttaggccaggaaaaaaatgaaaataatatcattcactattaccta
agaaaatattttaacataaagttttctgactcattgtaattccttctcca
taatgatgaaaattcactaagaagagaaattcttggaaatatcgagaaca
tagacagctgactggaaatatcatcatgtattttttttttttttagatct
gccctctgagtaaggcaaaacatatgttgatacttggtgtatttgctcgt
tttgtatgttaactggacacaagctggagttgtcacagagaaaggagcct
cccttaaggaaatgcctccatgagatccagctgtaaggtattttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttctttcttctttttcct
cctccttctcctcctcctttctccttctccaccaccaccgcttccccgtc
ttcttccttttggtttgtttgttttgttttcgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71454384_71455502
seq2: B6Ng01-172D17.b_44_1171

seq1  GAATTCTTAAACAGATGTTTTAGACAGATTTTCTCCACTTTCTGTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAACAGATGTTTTAGACAGATTTTCTCCACTTTCTGTTTCCA  50

seq1  TGGGGTTGTCTCTCACCTGCATAATTACTGCTTTACCCAATAATGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTGTCTCTCACCTGCATAATTACTGCTTTACCCAATAATGAAAAA  100

seq1  CAAAAAGTATGAGAAAAACACATCCTAGAGTCCCCCGTGAGAAGAAAATT  150
                       |||||||||||||||||||||||||||||||||
seq2  NNNNNNNNNNNNNNNNNACACATCCTAGAGTCCCCCGTGAGAAGAAAATT  150

seq1  GTTTCTTTGGTTCCCATACTTTTATTTATAGTTCCTTGAATATTGGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTGGTTCCCATACTTTTATTTATAGTTCCTTGAATATTGGATAC  200

seq1  AGTAATGGAGGGGAAATTAACTTCCTTAGCAGATTTTAACACCCCTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGAGGGGAAATTAACTTCCTTAGCAGATTTTAACACCCCTGAAC  250

seq1  AATGAATGTCATTCCTCTTGCCAATTAGTCATTTGATACATGGTGATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGTCATTCCTCTTGCCAATTAGTCATTTGATACATGGTGATGAT  300

seq1  CTCTACAGTATCACAGCTCTTCCTCCAAATACTTTTTGTTTACTGTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGTATCACAGCTCTTCCTCCAAATACTTTTTGTTTACTGTACAG  350

seq1  CCTTATGATAAAGTCTCAGAGAACAAAATGGGGTATAGAGATGGTTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGATAAAGTCTCAGAGAACAAAATGGGGTATAGAGATGGTTCAGC  400

seq1  AGTTACGTGCATTTGATACTTGAGAATAAGACCAGAATTGTCAGGTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACGTGCATTTGATACTTGAGAATAAGACCAGAATTGTCAGGTCATC  450

seq1  GACTCCAGTTCCACAGAGATCTGACATCTCAGGCGACTGTAGCCTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGTTCCACAGAGATCTGACATCTCAGGCGACTGTAGCCTTCTGC  500

seq1  ACTCACAGGTACACACATGCACATGCATGCACAGACACATGAATGCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGGTACACACATGCACATGCATGCACAGACACATGAATGCACAC  550

seq1  ACAAGTACACATACACAAACATACACACAAACACACACACATGCACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTACACATACACAAACATACACACAAACACACACACATGCACACAC  600

seq1  AAAAATACACAAATACATACACACATACTGATAAGTATGTAACAAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACACAAATACATACACACATACTGATAAGTATGTAACAAAAACA  650

seq1  ACATAGGGAAGACTATCAACCTGAATGCAAGTTGAAAGGCATGGAGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGAAGACTATCAACCTGAATGCAAGTTGAAAGGCATGGAGGATG  700

seq1  TTTAAGAGATGGTAACTAGGTGGTGGGACTGGGGCAAACTAGAAAAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGATGGTAACTAGGTGGTGGGACTGGGGCAAACTAGAAAAAGAG  750

seq1  GGGCAATGGTGTAATTCTATCTCAGTTAAAATAACAAAATAAATATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGGTGTAATTCTATCTCAGTTAAAATAACAAAATAAATATTTTA  800

seq1  AAATACACTGAATATAAGAAACAGTAGATAGATAGATAGATAGATAGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACTGAATATAAGAAACAGTAGATAGATAGATAGATAGATAGATA  850

seq1  GATAGATAGATAGATAGATAGATAGATGTTGAAATTAAGTTTAA-TTGAG  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GATAGATAGATAGATAGATAGATAGATGTTGAAATTAAGTTTAATTTGAG  900

seq1  TAAAAA-CTCAATTTGGTGGTTGAGAGGTATAAGCCCCACCTGGGAGAGA  948
      |||||| |||| |||||||||||||||||||||| |||||||||||||||
seq2  TAAAAACCTCATTTTGGTGGTTGAGAGGTATAAG-CCCACCTGGGAGAGA  949

seq1  GTAAGACAAAAGAGATCAGAAGTTCAAAGC-TAACCT-GTGCCA-CAG-T  994
      |||||||||||||||||||||||||||||| |||||| ||| || ||| |
seq2  GTAAGACAAAAGAGATCAGAAGTTCAAAGCTTAACCTGGTGTCACCAGTT  999

seq1  TATACTT-ATTTAGAGATAAAGAGAAGAGGAACT-GAGATGGTGGTAAGA  1042
      ||||||| |||||||||||||||| ||| ||||| |||||||||||||||
seq2  TATACTTAATTTAGAGATAAAGAG-AGATGAACTGGAGATGGTGGTAAGA  1048

seq1  AAGAGAGTTTTTAGATAAATAATAGG-ACAATAATGCTT-AATGTACCAA  1090
      |||||||||||   |||||| ||||| ||||| |||||| ||||||||||
seq2  AAGAGAGTTTTAGAATAAATTATAGGAACAAT-ATGCTTAAATGTACCAA  1097

seq1  AT--GATGGCAAAATTTGGGGGGAAGTATTT  1119
      ||   ||||||||||| ||||| | ||||||
seq2  ATTGAATGGCAAAATTGGGGGGAATGTATTT  1128


seq1: chr16_71597312_71598141
seq2: B6Ng01-172D17.g_68_903 (reverse)

seq1  AAAAC-AAAACAAAACAAACAA--CAAAA-GAAGAAGAAGGAGGAAGAGG  46
      ||||| ||||||||||||||||  ||||| |||||||| || ||||| ||
seq2  AAAACGAAAACAAAACAAACAAACCAAAAGGAAGAAGACGG-GGAAGCGG  49

seq1  AGGAGGAGGAGAAGGAG-AAGGAGGAGGAGAAGGAGGAGG-AAAAGAAG-  93
       || || |||||||||| |||||||||||||||||||||| |||||||| 
seq2  TGGTGGTGGAGAAGGAGAAAGGAGGAGGAGAAGGAGGAGGAAAAAGAAGA  99

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  149

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAC  199

seq1  CTTACAGCTGGATCTCATGGAGGCATTTCCTTAAGGGAGGCTCCTTTCTC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGCTGGATCTCATGGAGGCATTTCCTTAAGGGAGGCTCCTTTCTC  249

seq1  TGTGACAACTCCAGCTTGTGTCCAGTTAACATACAAAACGAGCAAATACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAACTCCAGCTTGTGTCCAGTTAACATACAAAACGAGCAAATACA  299

seq1  CCAAGTATCAACATATGTTTTGCCTTACTCAGAGGGCAGATCTAAAAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTATCAACATATGTTTTGCCTTACTCAGAGGGCAGATCTAAAAAAA  349

seq1  AAAAAAATACATGATGATATTTCCAGTCAGCTGTCTATGTTCTCGATATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATACATGATGATATTTCCAGTCAGCTGTCTATGTTCTCGATATT  399

seq1  TCCAAGAATTTCTCTTCTTAGTGAATTTTCATCATTATGGAGAAGGAATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAATTTCTCTTCTTAGTGAATTTTCATCATTATGGAGAAGGAATT  449

seq1  ACAATGAGTCAGAAAACTTTATGTTAAAATATTTTCTTAGGTAATAGTGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGTCAGAAAACTTTATGTTAAAATATTTTCTTAGGTAATAGTGA  499

seq1  ATGATATTATTTTCATTTTTTTCCTGGCCTAAATTAGAGACGTGTCTAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTATTTTCATTTTTTTCCTGGCCTAAATTAGAGACGTGTCTAAA  549

seq1  ATAGTTTATAAACTTTATCTCTCATCCATGTCCCTCCCTTCATCTACCTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTATAAACTTTATCTCTCATCCATGTCCCTCCCTTCATCTACCTC  599

seq1  CAATGTCTATTTTATTTCCTCTTCTGAGTGAGATTCAAGTATCTTCCCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTATTTTATTTCCTCTTCTGAGTGAGATTCAAGTATCTTCCCTT  649

seq1  GGACCGTCCTTGTTCCTTAGCTTTTATATGTTTGTTGCTTGCAGCATGGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGTCCTTGTTCCTTAGCTTTTATATGTTTGTTGCTTGCAGCATGGT  699

seq1  TATCCTGTACTTCATAGCTATTAACCACCTTTAAGTGAATACATACCATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTACTTCATAGCTATTAACCACCTTTAAGTGAATACATACCATG  749

seq1  AGTGCTTTTCTGGGTCTGGGTTTCCTCACTCAGAATGATATTTCCTGGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTTCTGGGTCTGGGTTTCCTCACTCAGAATGATATTTCCTGGTT  799

seq1  CTATACATTTTCCTGAGAATTTTGCAATGTAGAATTC  830
      |||||||||||||||||||||||||||||||||||||
seq2  CTATACATTTTCCTGAGAATTTTGCAATGTAGAATTC  836


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