BAC Information

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BAC

Clone NameB6Ng01-172G22
Chromosome16 (Build37)
Map Location 28,567,511 - 28,687,537
singlet/doubletdoublet
Overlap geneFgf12
Upstream genenone
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172G22.bB6Ng01-172G22.g
ACCGA001047GA001048
length4301,122
definitionB6Ng01-172G22.b B6Ng01-172G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,687,102 - 28,687,537)(28,567,511 - 28,568,622)
sequence
aataatgtctttgtcaagttttcacattgtgcctgccaagtagtacgtat
ttcataagcatgtctattactcattttaagcatcctatggacaaggaaat
acgttagaaagtgcatagtgccaagaatcacggaccacactttatgattt
tatgatctaatactgctaggtgtgtgctttcattgggtactccaaaaata
atacacgagcaaaaggagatttgccataaccttgaagtggctgttgtatg
gggaaattctgggatttggatggtggatgagtgggtgggcatcctctgtg
ctggtgagtggatatttagcagcattcaggacttctgtacactcaatgcc
aatactatctcctcaaactccaattgtaacaacaagaaatagatttcaac
atggtaatatgcccttgggggttttaaaat

gaattcactttaatggtgctatgatgtataaaaagagaacaaatacacac
catagaagccagggaagtggttgactagtttggacaaaaactttcaagtg
ttctttctgtgcatttctaaattaaacttggaagttctgtggcaatggta
tcttacttaaaatgcaacacacatagttgtcttgatggctaaatattaag
ttatattttctgtttccggatagggttttttatagttttctatgctttct
attttctaatcataatgataccttggaccagttctatcatataacttagc
aacatggtttcatgatgaaatcatttagcactattttggagatacaagat
cttgttataaagaccaggatggcttaaaaagtgtgatcctcctgcctcag
cattcctagtgctagtattaaaatagtacaacagcctagccaagtagcaa
ttaataaggattgagtagactggttcataaaacagatttgtttaaattcc
aaatacctcattttcaattaaacctattatttacttaaggtttatatgaa
ttaacaattttatgagggagcgattttcaaattggggctaatataagata
ttttggttcatattaaacactggaatttgctcactcttggcataactgtg
caattggtgtgtttatctccttggaaacctacatcaaatgagtaataata
cattaagaatttgtcaggtctccacattttatactgagcatataaatgac
tactaagtagatagcaactttctccctcccaacaaatcaagaaagcaaat
gagctaaaacagtgaaatatgtacagcaccccacgttatgttttcttttg
tcccttgtggggctgcaaactctgcctatatctcatgtttttagaagtcc
cttcaaagtggactatgatagacaaccatgccagcttattcagacacgac
acagttccccagagtttactttattagtaatatatactattagtagtagt
agtatatattcaatccaattgactatttttccaaaaagaataaatgacac
aggtttatatttctttctagccgattgcctgcttcctccgtcttcctttt
tgtttttttctcatcaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28687102_28687537
seq2: B6Ng01-172G22.b_47_482 (reverse)

seq1  ATTTTATAACCCCCAGGGGCATTTTACCATGTTGAAATCTATTTCTTGTT  50
      |||||| |||||||| |||||| |||||||||||||||||||||||||||
seq2  ATTTTAAAACCCCCAAGGGCATATTACCATGTTGAAATCTATTTCTTGTT  50

seq1  GTTACAATTGGAGTTTGAGGAGATAGTATTGGCATTGAGTGTACAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAATTGGAGTTTGAGGAGATAGTATTGGCATTGAGTGTACAGAAGT  100

seq1  CCTGAATGCTGCTAAATATCCACTCACCAGCACAGAGGATGCCCACCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGCTGCTAAATATCCACTCACCAGCACAGAGGATGCCCACCCAC  150

seq1  TCATCCACCATCCAAATCCCAGAATTTCCCCATACAACAGCCACTTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACCATCCAAATCCCAGAATTTCCCCATACAACAGCCACTTCAAG  200

seq1  GTTATGGCAAATCTCCTTTTGCTCGTGTATTATTTTTGGAGTACCCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGCAAATCTCCTTTTGCTCGTGTATTATTTTTGGAGTACCCAATG  250

seq1  AAAGCACACACCTAGCAGTATTAGATCATAAAATCATAAAGTGTGGTCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACACACCTAGCAGTATTAGATCATAAAATCATAAAGTGTGGTCCG  300

seq1  TGATTCTTGGCACTATGCACTTTCTAACGTATTTCCTTGTCCATAGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTGGCACTATGCACTTTCTAACGTATTTCCTTGTCCATAGGATG  350

seq1  CTTAAAATGAGTAATAGACATGCTTATGAAATACGTACTACTTGGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATGAGTAATAGACATGCTTATGAAATACGTACTACTTGGCAGGC  400

seq1  ACAATGTGAAAACTTGACAAAGACATTATTGAATTC  436
      ||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGAAAACTTGACAAAGACATTATTGAATTC  436


seq1: chr16_28567511_28568622
seq2: B6Ng01-172G22.g_63_1184

seq1  GAATTCACTTTAATGGTGCTATGATGTATAAAAAGAGAACAAATACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAATGGTGCTATGATGTATAAAAAGAGAACAAATACACAC  50

seq1  CATAGAAGCCAGGGAAGTGGTTGACTAGTTTGGACAAAAACTTTCAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAGCCAGGGAAGTGGTTGACTAGTTTGGACAAAAACTTTCAAGTG  100

seq1  TTCTTTCTGTGCATTTCTAAATTAAACTTGGAAGTTCTGTGGCAATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGTGCATTTCTAAATTAAACTTGGAAGTTCTGTGGCAATGGTA  150

seq1  TCTTACTTAAAATGCAACACACATAGTTGTCTTGATGGCTAAATATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTAAAATGCAACACACATAGTTGTCTTGATGGCTAAATATTAAG  200

seq1  TTATATTTTCTGTTTCCGGATAGGGTTTTTTATAGTTTTCTATGCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTCTGTTTCCGGATAGGGTTTTTTATAGTTTTCTATGCTTTCT  250

seq1  ATTTTCTAATCATAATGATACCTTGGACCAGTTCTATCATATAACTTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAATCATAATGATACCTTGGACCAGTTCTATCATATAACTTAGC  300

seq1  AACATGGTTTCATGATGAAATCATTTAGCACTATTTTGGAGATACAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTTTCATGATGAAATCATTTAGCACTATTTTGGAGATACAAGAT  350

seq1  CTTGTTATAAAGACCAGGATGGCTTAAAAAGTGTGATCCTCCTGCCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATAAAGACCAGGATGGCTTAAAAAGTGTGATCCTCCTGCCTCAG  400

seq1  CATTCCTAGTGCTAGTATTAAAATAGTACAACAGCCTAGCCAAGTAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTAGTGCTAGTATTAAAATAGTACAACAGCCTAGCCAAGTAGCAA  450

seq1  TTAATAAGGATTGAGTAGACTGGTTCATAAAACAGATTTGTTTAAATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGGATTGAGTAGACTGGTTCATAAAACAGATTTGTTTAAATTCC  500

seq1  AAATACCTCATTTTCAATTAAACCTATTATTTACTTAAGGTTTATATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCATTTTCAATTAAACCTATTATTTACTTAAGGTTTATATGAA  550

seq1  TTAACAATTTTATGAGGGAGCGATTTTCAAATTGGGGCTAATATAAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATTTTATGAGGGAGCGATTTTCAAATTGGGGCTAATATAAGATA  600

seq1  TTTTGGTTCATATTAAACACTGGAATTTGCTCACTCTTGGCATAACTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTCATATTAAACACTGGAATTTGCTCACTCTTGGCATAACTGTG  650

seq1  CAATTGGTGTGTTTATCTCCTTGGAAACCTACATCAAATGAGTAATAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTGTGTTTATCTCCTTGGAAACCTACATCAAATGAGTAATAATA  700

seq1  CATTAAGAATTTGTCAGGTCTCCACA-TTTATACTGAGCATATAAATGAC  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATTAAGAATTTGTCAGGTCTCCACATTTTATACTGAGCATATAAATGAC  750

seq1  TACTAAGTAGATAGCAACTTTCTCCCTCCCAACAAATCAAGAAAGCAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTAGATAGCAACTTTCTCCCTCCCAACAAATCAAGAAAGCAAAT  800

seq1  GAGCTAAAACAGTGAAATATGTACAGCACCCCACGTTATG-TTTCTTTTG  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGCTAAAACAGTGAAATATGTACAGCACCCCACGTTATGTTTTCTTTTG  850

seq1  TCCCTTGTGGGGCTGCAAACTCTGCCTATATCTCATG-TTTTAGAAGTCC  897
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCCTTGTGGGGCTGCAAACTCTGCCTATATCTCATGTTTTTAGAAGTCC  900

seq1  CTTCAAAGTGGACTATGATAGACAACCATGCCAGCTTATTCAGACACGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGTGGACTATGATAGACAACCATGCCAGCTTATTCAGACACGAC  950

seq1  ACAG-TCCCCAGAGTTTACTTTATTAGTAATATATTACTATTAGTAGTAG  996
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAGTTCCCCAGAGTTTACTTTATTAGTAATATA-TACTATTAGTAGTAG  999

seq1  TAGTAATATA-TCAATCAAATTAACTATTTTCCAAAAAAAAATAAATGAA  1045
      |||| ||||| |||||| |||| |||||||| | ||||| |||||||| |
seq2  TAGT-ATATATTCAATCCAATTGACTATTTTTCCAAAAAGAATAAATG-A  1047

seq1  CACAGGTTTATATT--CTTCTAGCCGATTG-CTGTTTC--TCGTCTTCCT  1090
      ||||||||||||||   ||||||||||||| ||| |||   |||||||||
seq2  CACAGGTTTATATTTCTTTCTAGCCGATTGCCTGCTTCCTCCGTCTTCCT  1097

seq1  TT---TGTTTTTCTCATCAAATTTT  1112
      ||   | ||||||||||||| ||||
seq2  TTTTGTTTTTTTCTCATCAATTTTT  1122


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