BAC Information

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BAC

Clone NameB6Ng01-172J18
Chromosome16 (Build37)
Map Location 68,834,004 - 68,975,998
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172J18.bB6Ng01-172J18.g
ACCGA001179GA001180
length9731,102
definitionB6Ng01-172J18.b B6Ng01-172J18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,975,026 - 68,975,998)(68,834,004 - 68,835,109)
sequence
gaattcttggatttcttagtaatgtaacaattttcaatgaagccaccaca
cacaagggcataggacttggagcagtcaaggcagaacttatccaaaagcc
tccatcctcagggccagcttctgtgttctgtgctattcattgctttatgt
tgacctcagaaattactgaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaccagagtgagggttacgttgtttaaaatgttttgcaatgcaa
cgtagcattatctggtactgtgaaacaacaacaacaacaaaaatccctcc
ttttcattgtcaacagtttattaacaagctgtaaatactatgaaccacaa
ctatgtctcttctgccaagaggtctctaatgtctaatgttgccactttta
acattgggtaaccaacagttgtaaactggtcttaaagcattcagtaagca
ggaaactattcttgctgttgtaactctagactactcaaatcgtaaatcct
aaaaggaaccaatgaagggcatcattctaagctaatttctaactgtattc
taaatatgcatactatatccacaaataaatttactgttatcccttgtcaa
agaaccttctgttatcaacagtgcttggccattttactacaaaaagaata
cattttacaaacacaaacgtgtgccatttttcaatactatatgtaagaca
agcaaaattaaaatgaaagacaatataaaatctacaaaaagatggagatg
ggatatattattaaactctaactagtgaggtattgtatcttactttctag
atggattaaagaaacagacgttgttaaagaaatgcctcttgactctagct
gcatatgtattgaaagatggccctagttggccatcactggaaagagaggc
tcattggacttgcaaattttatatgcccagtacaggggaacgccagggcc
aaaaagtgggggtgggtgggtgg
gaattcttaattgagtggtaatcttatgcactaacacaagaattacatct
ttatgtcattgaaaagcattgtgtcataacacaagcactgaagtaggcat
tctctttttcctaaagtattaagattttccaaaatgtctacatttgagca
aattaaaaacttcctggtatttatgatcttttctataaagctaggttttt
gttttgttttgatttgatttgattttttcacatcgatacgtggttgctta
agaactatgattatatgtttcatgttaaaaaataagaaccatgctcatac
agttcttagtaaatattcataagaataagtttagtttttcaattgctttt
aaaaatgattttaaaaagaagttcaggtagaaagtacatgtatgaaaatt
tacagagttgcatatgtgacataatgtcgtctgataattcaatgtgggac
catctataaatctggatattatgactgaatgtaacataaaaacaaatcaa
tagaattttaatgcaaaagctgcatgatcttaaaatatgtattaaagtat
gttaggagactggaataacaaaatcaaacatttagtcaaatgaaatgaac
agatgtgattaagataaagaatagttcaaaagtttgaaaaggacatgcat
ttgtcctccaagaagtctccggttgtccaagctgtaggccctaggtgcta
ggactctgaaatgaaattggtcttctgtcaatggatgtctctaggaaata
tgtggaaacaatagtttagcagccgagagcactgcaggactaaataaaca
gcctgcattttttgcttagagcagaatctacaactaatttctgttagcac
caagtctttgtacactcaaaattgaagattaaaaagtcaaaataaacaaa
ctaacacatgttcaatgtgtcaacatccttagaatttgcaacacattgcc
ttcaactattgtctctattttttctggattatttttaaagttgtcacttt
tcatcttttccaagaagtatcttttttaaaatgaatcttattcagaaatg
ataaagataaaaatgtttcatgttgatttctgtgaactttcatatgctct
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68975026_68975998
seq2: B6Ng01-172J18.b_45_1017 (reverse)

seq1  CCACCCACCCACCCCCACTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCACCCACCCACCCCCACTTTTTGGCCCTGGCGTTCCCCTGTACT-GGGC  49

seq1  ATATAAAATTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACT  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATATAAAATTTGCAAGTCCAATGAGCCTCTCTTTCCAGTGATGGCCAACT  99

seq1  A-GGCCATCTTTCAATACATATGCAGCTAGAGTCAAGAGGCATTTCTTTA  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCATCTTTCAATACATATGCAGCTAGAGTCAAGAGGCATTTCTTTA  149

seq1  ACAACGTCTGTTTCTTTAATCCATCTAGAAAGTAAGATACAATACCTCAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGTCTGTTTCTTTAATCCATCTAGAAAGTAAGATACAATACCTCAC  199

seq1  TAGTTAGAGTTTAATAATATATCCCATCTCCATCTTTTTGTAGATTTTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAGTTTAATAATATATCCCATCTCCATCTTTTTGTAGATTTTAT  249

seq1  ATTGTCTTTCATTTTAATTTTGCTTGTCTTACATATAGTATTGAAAAATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTTCATTTTAATTTTGCTTGTCTTACATATAGTATTGAAAAATG  299

seq1  GCACACGTTTGTGTTTGTAAAATGTATTCTTTTTGTAGTAAAATGGCCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGTTTGTGTTTGTAAAATGTATTCTTTTTGTAGTAAAATGGCCAA  349

seq1  GCACTGTTGATAACAGAAGGTTCTTTGACAAGGGATAACAGTAAATTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTTGATAACAGAAGGTTCTTTGACAAGGGATAACAGTAAATTTAT  399

seq1  TTGTGGATATAGTATGCATATTTAGAATACAGTTAGAAATTAGCTTAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGATATAGTATGCATATTTAGAATACAGTTAGAAATTAGCTTAGAA  449

seq1  TGATGCCCTTCATTGGTTCCTCTTAGGATCTACGATCTGAGTAGTCTAGA  499
      ||||||||||||||||||||| ||||||| |||||| |||||||||||||
seq2  TGATGCCCTTCATTGGTTCCTTTTAGGATTTACGATTTGAGTAGTCTAGA  499

seq1  GTTACAACAGCAAGAATAGTCTCCTGCTTACTGAATGCTTTAAGACCAGT  549
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTACAACAGCAAGAATAGTTTCCTGCTTACTGAATGCTTTAAGACCAGT  549

seq1  CTACAACTGTTGGTTACCCAATGTTAAAAGTGGCAACATTAGACATTAGA  599
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTGTTGGTTACCCAATGTTAAAAGTGGCAACATTAGACATTAGA  599

seq1  GACCTCTTGGCAGAAGAGACATAGTTGTGGTTCATAGTATTTACAGCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTGGCAGAAGAGACATAGTTGTGGTTCATAGTATTTACAGCTTG  649

seq1  TTAATAAACTGTTGACAATGAAAAGGAGGGATTTTTGTTGTTGTTGTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAACTGTTGACAATGAAAAGGAGGGATTTTTGTTGTTGTTGTTGT  699

seq1  TTCACAGTACCAGATAATGCTACGTTGCATTGCAAAACATCTTAAACAAC  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCACAGTACCAGATAATGCTACGTTGCATTGCAAAACATTTTAAACAAC  749

seq1  GTAACCCTCACTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTAACCCTCACTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  799

seq1  TACTTTCAGTAATTTCTGAGGTCAACATAAAGCAATGAATAGCACAGAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAGTAATTTCTGAGGTCAACATAAAGCAATGAATAGCACAGAAC  849

seq1  ACAGAAGCTGGCCCTGAGGATGGAGGCTTTTGGATAAGTTCTGCCTTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCTGGCCCTGAGGATGGAGGCTTTTGGATAAGTTCTGCCTTGAC  899

seq1  TGCTCCAAGTCCTATGCCCTTGTGTGTGGTGGCTTCATTGAAAATTGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAAGTCCTATGCCCTTGTGTGTGGTGGCTTCATTGAAAATTGTTA  949

seq1  CATTACTAAGAAATCCAAGAATTC  973
      ||||||||||||||||||||||||
seq2  CATTACTAAGAAATCCAAGAATTC  973

seq1: chr16_68834004_68835109
seq2: B6Ng01-172J18.g_63_1164

seq1  GAATTCTTAATTGAGTGGTAATCTTATGCACTAACACAAGAATTACATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATTGAGTGGTAATCTTATGCACTAACACAAGAATTACATCT  50

seq1  TTATGTCATTGAAAAGCATTGTGTCATAACACAAGCACTGAAGTAGGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCATTGAAAAGCATTGTGTCATAACACAAGCACTGAAGTAGGCAT  100

seq1  TCTCTTTTTCCTAAAGTATTAAGATTTTCCAAAATGTCTACATTTGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTCCTAAAGTATTAAGATTTTCCAAAATGTCTACATTTGAGCA  150

seq1  AATTAAAAACTTCCTGGTATTTATGATCTTTTCTATAAAGCTAGGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAACTTCCTGGTATTTATGATCTTTTCTATAAAGCTAGGTTTTT  200

seq1  GTTTTGTTTTGATTTGATTTGATTTTTTCACATCGATACGTGGTTGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGATTTGATTTGATTTTTTCACATCGATACGTGGTTGCTTA  250

seq1  AGAACTATGATTATATGTTTCATGTTAAAAAATAAGAACCATGCTCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATGATTATATGTTTCATGTTAAAAAATAAGAACCATGCTCATAC  300

seq1  AGTTCTTAGTAAATATTCATAAGAATAAGTTTAGTTTTTCAATTGCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAGTAAATATTCATAAGAATAAGTTTAGTTTTTCAATTGCTTTT  350

seq1  AAAAATGATTTTAAAAAGAAGTTCAGGTAGAAAGTACATGTATGAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGATTTTAAAAAGAAGTTCAGGTAGAAAGTACATGTATGAAAATT  400

seq1  TACAGAGTTGCATATGTGACATAATGTCGTCTGATAATTCAATGTGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTTGCATATGTGACATAATGTCGTCTGATAATTCAATGTGGGAC  450

seq1  CATCTATAAATCTGGATATTATGACTGAATGTAACATAAAAACAAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATAAATCTGGATATTATGACTGAATGTAACATAAAAACAAATCAA  500

seq1  TAGAATTTTAATGCAAAAGCTGCATGATCTTAAAATATGTATTAAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTTAATGCAAAAGCTGCATGATCTTAAAATATGTATTAAAGTAT  550

seq1  GTTAGGAGACTGGAATAACAAAATCAAACATTTAGTCAAATGAAATGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAGACTGGAATAACAAAATCAAACATTTAGTCAAATGAAATGAAC  600

seq1  AGATGTGATTAAGATAAAGAATAGTTCAAAAGTTTGAAAAGGACATGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGATTAAGATAAAGAATAGTTCAAAAGTTTGAAAAGGACATGCAT  650

seq1  TTGTCCTCCAAGAAGTCTCCGGTTGTCCAAGCTGTAGGCCCTAGGTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCCAAGAAGTCTCCGGTTGTCCAAGCTGTAGGCCCTAGGTGCTA  700

seq1  GGACTCTGAAATGAAATTGGTCTTCTGTCAATGGATGTCTCTAGGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGAAATGAAATTGGTCTTCTGTCAATGGATGTCTCTAGGAAATA  750

seq1  TGTGGAAACAATAGTTTAGCAGCCGAGAGCACTGCAGGACTAAATAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAACAATAGTTTAGCAGCCGAGAGCACTGCAGGACTAAATAAACA  800

seq1  GCCTGCATTTTTTGCTTAGAGCAGAATCTACAACTAATTTCTGTTAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATTTTTTGCTTAGAGCAGAATCTACAACTAATTTCTGTTAGCAC  850

seq1  CAAGTCTTTGTACACTCAAAATTGAAGATTAAAAAGTCAAAATAAAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAAGTCTTTGTACACTCAAAATTGAAGATTAAAAAGTCAAAAT-AAACAA  899

seq1  ACTAACACATGTTTCAATGTGTCAACATCCTTAGAATTTGCAACACATTG  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTAACACATG-TTCAATGTGTCAACATCCTTAGAATTTGCAACACATTG  948

seq1  CCTTCAACTA-TGTCTCTA-TTTTTCTGGATTATTTTTAAAGTTGTCAAC  998
      |||||||||| |||||||| ||||||||||||||||||||||||||||  
seq2  CCTTCAACTATTGTCTCTATTTTTTCTGGATTATTTTTAAAGTTGTCACT  998

seq1  TTTCATCTTTTCATAGAAGTATC-TTTTTAAAATGAATCTTA-TCAGAAA  1046
      ||||||||||||  ||||||||| |||||||||||||||||| |||||||
seq2  TTTCATCTTTTCCAAGAAGTATCTTTTTTAAAATGAATCTTATTCAGAAA  1048

seq1  TGATAAAAGATAAAAAAATGTTTCATGTTGATTTTCTGTGAAACTTTCAT  1096
      |||| ||||||  |||||||||||||||||| |||||||| |||||||| 
seq2  TGAT-AAAGAT--AAAAATGTTTCATGTTGA-TTTCTGTG-AACTTTCA-  1092

seq1  TATGCTCTTA  1106
      ||||||||||
seq2  TATGCTCTTA  1102