BAC Information

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BAC

Clone NameB6Ng01-173P11
Chromosome16 (Build37)
Map Location 69,226,131 - 69,270,850
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2, EG664930
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173P11.bB6Ng01-173P11.g
ACCGA002170GA002171
length1,082365
definitionB6Ng01-173P11.b B6Ng01-173P11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,269,770 - 69,270,850)(69,226,131 - 69,226,501)
sequence
gaattcacttgtgttcactgaagatcttctttctaagttcaattgtttca
tcaacatgcagtttgatattttatccttcagcttccatcattttcttcat
ctgttggtatttagaggtattttatgatgtaaaaattgattcatactagt
gtattatctatgtgtctacttattcttgtaggtaggattcagtttcactc
atttgagatctgttattagctagtgggcatctactgaatagtaaactacc
atagtaatttggtgaaactactgagtcaataatttttaaatgagataatg
gaatgcattaataccaaatgattagaaacagaaaaaccacagaagatatc
tgtagaattcttaatacttatagatactaatctaaatgatcaattggtga
acttttaaatatttaaagataccatattatgtactttagcattttataat
ttctatgaaattaaaatgattatttaaattaataatatttgctaattaaa
atgaaaaaaaaatctaatctaaatttaatttacaatgttcccctaaaccc
atgacttttttatatcacccttcacctgcagtgatttaacattgaaacag
ccatgcagatttaattatgcgttggctcctaagggatgcactcatatatc
agttttcatctctcatggacagatcattttcagttaagttacaaacccct
gaaaatcaatttttaatggaaatactcacacagccttaactgtaagagag
caaaaatgcaggtataataccaagtggcaggttattaactataacttcaa
ttttatgttcgtttgacacaagactatgtcagccataaataagtaacatt
taccacacaattcacacttaacaagagattacccctgaaggaaagtttta
gtggttcttgcactgagcccatggggactctgaaggattttttctatttg
cttaggaagaagcactgaaccaaaaaagagtgtgctaatgatgtttaaat
cttagtgagaaacccatcaaagaagaaagtgtagagtttacttgaaatgt
tccactatcatgtgtagcagtaaacagagaaa

ataggtaatatttcagaggaggagggaaagctgaagggggtattctgtgg
cagagagataaatgaaattggggtgttgagcttggagcagaggtggatgg
tcttcagttggcttacctgttttcctggcatgctcagcagggatgcttcc
ctgtgaaggaacacctactgctttcagagcctgggataataagtttgaag
aaagaatcttgttcagagattcagagaagatctttgtcattctttgggaa
tagaggcagaaaggaaatggaaatgacaccaaattttctgctatagagtg
gggatgatggttctgcagaggttttttttttgttttttgttttttggggt
ttttttgggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69269770_69270850
seq2: B6Ng01-173P11.b_41_1122 (reverse)

seq1  TTTCTCTGTTTACTGCTACACATGATAGTGG-ACA-TTCAAGTAAACTCT  48
      ||||||||||||||||||||||||||||||| ||| ||||||||||||||
seq2  TTTCTCTGTTTACTGCTACACATGATAGTGGAACATTTCAAGTAAACTCT  50

seq1  ACACTTTCTTCTTTGATGGGTTTCTCACTAGAATTTAAACATCATTTTAG  98
      ||||||||||||||||||||||||||||||  ||||||||||||  ||||
seq2  ACACTTTCTTCTTTGATGGGTTTCTCACTAAGATTTAAACATCA--TTAG  98

seq1  CACACTC-TTTTTGGTTCAGTGCCTTCTTCCTAAGCAAATAG-AAAAATC  146
      ||||||| |||||||||||||| ||||||||||||||||||| |||||||
seq2  CACACTCTTTTTTGGTTCAGTG-CTTCTTCCTAAGCAAATAGAAAAAATC  147

seq1  CTTCAGAGTCCCCATGGGCTCAGTGCAAGAACCACTAAAACTTTCCTTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTCCCCATGGGCTCAGTGCAAGAACCACTAAAACTTTCCTTCA  197

seq1  GGGGTAATCTCTTGTTAAGTGTGAATTGTGTGGTAAATGTTACTTATTTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAATCTCTTGTTAAGTGTGAATTGTGTGGTAAATGTTACTTATTTA  247

seq1  TGGCTGACATAGTCTTGTGTCAAACGAACATAAAATTGAAGTTATAGTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGACATAGTCTTGTGTCAAACGAACATAAAATTGAAGTTATAGTTA  297

seq1  ATAACCTGCCACTTGGTATTATACCTGCATTTTTGCTCTCTTACAGTTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGCCACTTGGTATTATACCTGCATTTTTGCTCTCTTACAGTTAA  347

seq1  GGCTGTGTGAGTATTTCCATTAAAAATTGATTTTCAGGGGTTTGTAACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGTGAGTATTTCCATTAAAAATTGATTTTCAGGGGTTTGTAACTT  397

seq1  AACTGAAAATGATCTGTCCATGAGAGATGAAAACTGATATATGAGTGCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAATGATCTGTCCATGAGAGATGAAAACTGATATATGAGTGCAT  447

seq1  CCCTTAGGAGCCAACGCATAATTAAATCTGCATGGCTGTTTCAATGTTAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGGAGCCAACGCATAATTAAATCTGCATGGCTGTTTCAATGTTAA  497

seq1  ATCACTGCAGGTGAAGGGTGATATAAAAAAGTCATGGGTTTAGGGGAACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGCAGGTGAAGGGTGATATAAAAAAGTCATGGGTTTAGGGGAACA  547

seq1  TTGTAAATTAAATTTAGATTAGATTTTTTTTTCATTTTAATTAGCAAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATTAAATTTAGATTAGATTTTTTTTTCATTTTAATTAGCAAATA  597

seq1  TTATTAATTTAAATAATCATTTTAATTTCATAGAAATTATAAAATGCTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTAAATAATCATTTTAATTTCATAGAAATTATAAAATGCTAA  647

seq1  AGTACATAATATGGTATCTTTAAATATTTAAAAGTTCACCAATTGATCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATAATATGGTATCTTTAAATATTTAAAAGTTCACCAATTGATCAT  697

seq1  TTAGATTAGTATCTATAAGTATTAAGAATTCTACAGATATCTTCTGTGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTAGTATCTATAAGTATTAAGAATTCTACAGATATCTTCTGTGGT  747

seq1  TTTTCTGTTTCTAATCATTTGGTATTAATGCATTCCATTATCTCATTTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTCTAATCATTTGGTATTAATGCATTCCATTATCTCATTTAA  797

seq1  AAATTATTGACTCAGTAGTTTCACCAAATTACTATGGTAGTTTACTATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTGACTCAGTAGTTTCACCAAATTACTATGGTAGTTTACTATTC  847

seq1  AGTAGATGCCCACTAGCTAATAACAGATCTCAAATGAGTGAAACTGAATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGCCCACTAGCTAATAACAGATCTCAAATGAGTGAAACTGAATC  897

seq1  CTACCTACAAGAATAAGTAGACACATAGATAATACACTAGTATGAATCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTACAAGAATAAGTAGACACATAGATAATACACTAGTATGAATCAA  947

seq1  TTTTTACATCATAAAATACCTCTAAATACCAACAGATGAAGAAAATGATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATCATAAAATACCTCTAAATACCAACAGATGAAGAAAATGATG  997

seq1  GAAGCTGAAGGATAAAATATCAAACTGCATGTTGATGAAACAATTGAACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGAAGGATAAAATATCAAACTGCATGTTGATGAAACAATTGAACT  1047

seq1  TAGAAAGAAGATCTTCAGTGAACACAAGTGAATTC  1081
      |||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAAGATCTTCAGTGAACACAAGTGAATTC  1082


seq1: chr16_69226131_69226501
seq2: B6Ng01-173P11.g_66_436

seq1  GAATTCATAGGTAATATTTCAGAGGAGGAGGGAAAGCTGAAGGGGGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGTAATATTTCAGAGGAGGAGGGAAAGCTGAAGGGGGTATT  50

seq1  CTGTGGCAGAGAGATAAATGAAATTGGGGTGTTGAGCTTGGAGCAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCAGAGAGATAAATGAAATTGGGGTGTTGAGCTTGGAGCAGAGGT  100

seq1  GGATGGTCTTCAGTTGGCTTACCTGTTTTCCTGGCATGCTCAGCAGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCTTCAGTTGGCTTACCTGTTTTCCTGGCATGCTCAGCAGGGAT  150

seq1  GCTTCCCTGTGAAGGAACACCTACTGCTTTCAGAGCCTGGGATAATAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTGTGAAGGAACACCTACTGCTTTCAGAGCCTGGGATAATAAGT  200

seq1  TTGAAGAAAGAATCTTGTTCAGAGATTCAGAGAAGATCTTTGTCATTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAAAGAATCTTGTTCAGAGATTCAGAGAAGATCTTTGTCATTCTT  250

seq1  TGGGAATAGAGGCAGAAAGGAAATGGAAATGACACCAAATTTTCTGCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATAGAGGCAGAAAGGAAATGGAAATGACACCAAATTTTCTGCTAT  300

seq1  AGAGTGGGGATGATGGTTCTGCAGAGGTTTTTTTTTTGTTTTTTGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGGATGATGGTTCTGCAGAGGTTTTTTTTTTGTTTTTTGTTTTT  350

seq1  TGGGGTTTTTTTGGGGGGGTG  371
      |||||||||||||||||||||
seq2  TGGGGTTTTTTTGGGGGGGTG  371


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